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make documentation for release 2.0.2

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muntwiler_m 2019-02-10 14:39:57 +01:00
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</div>
<div class="header">
<div class="summary">
<a href="#func-members">Functions</a> &#124;
<a href="#var-members">Variables</a> </div>
<div class="headertitle">
<div class="title">fermi-edge-analysis.ipf File Reference<div class="ingroups"><a class="el" href="group___arpes_package.html">ARPES package</a></div></div> </div>
<div class="title">fermi-edge-analysis.ipf File Reference</div> </div>
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<p>tools for analysing the Fermi edge measured by the Scienta EW4000 analyser.
<a href="#details">More...</a></p>
<div class="textblock"><code>#include &quot;pearl-area-profiles&quot;</code><br />
</div>
<p><a href="fermi-edge-analysis_8ipf_source.html">Go to the source code of this file.</a></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
Functions</h2></td></tr>
<tr class="memitem:a1c4a805435a1d43c2b6dfb6deb633894"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a1c4a805435a1d43c2b6dfb6deb633894">analyse_curved_edge</a> (wave data)</td></tr>
<tr class="separator:a1c4a805435a1d43c2b6dfb6deb633894"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aac6bac1ee0582caa0676bdc9c2d254f0"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#aac6bac1ee0582caa0676bdc9c2d254f0">record_results</a> (variable index)</td></tr>
<tr class="separator:aac6bac1ee0582caa0676bdc9c2d254f0"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a2a1d7b49c1f88f29ee6d49f6a6f4fbf8"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a2a1d7b49c1f88f29ee6d49f6a6f4fbf8">integrate_curved_edge</a> (wave data, wave data_sig)</td></tr>
<tr class="separator:a2a1d7b49c1f88f29ee6d49f6a6f4fbf8"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a4cec596c8fd2b21953cb45d6d347211d"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a4cec596c8fd2b21953cb45d6d347211d">slit_correction</a> (wave data, wave data_out, variable epass)</td></tr>
<tr class="separator:a4cec596c8fd2b21953cb45d6d347211d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a520d8de9fbc4276c19fb417861f05b0d"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a520d8de9fbc4276c19fb417861f05b0d">FermiFuncLinDOS2D_corr</a> (variable w, threadsafe x, wave y)</td></tr>
<tr class="separator:a520d8de9fbc4276c19fb417861f05b0d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a27f000c3a3ea74c49db31716be3396d4"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a27f000c3a3ea74c49db31716be3396d4">slit_shift</a> (variable ypix, variable epass)</td></tr>
<tr class="separator:a27f000c3a3ea74c49db31716be3396d4"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:acf72d644b8d37b6c26b1e070edba4e30"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#acf72d644b8d37b6c26b1e070edba4e30">show_shift</a> (wave data)</td></tr>
<tr class="separator:acf72d644b8d37b6c26b1e070edba4e30"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ad23de34bb698589e2576ce2836b89d55"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#ad23de34bb698589e2576ce2836b89d55">analyser_energy_resolution</a> (variable epass, variable slit)</td></tr>
<tr class="memdesc:ad23de34bb698589e2576ce2836b89d55"><td class="mdescLeft">&#160;</td><td class="mdescRight">calculate the energy resolution of the analyser <a href="#ad23de34bb698589e2576ce2836b89d55">More...</a><br /></td></tr>
<tr class="separator:ad23de34bb698589e2576ce2836b89d55"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="var-members"></a>
Variables</h2></td></tr>
<tr class="memitem:a09f26b0a0fd940a3d8c6f92aa769c8bc"><td class="memItemLeft" align="right" valign="top">static const variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a09f26b0a0fd940a3d8c6f92aa769c8bc">mcp_radius_pix</a> = 555</td></tr>
<tr class="memdesc:a09f26b0a0fd940a3d8c6f92aa769c8bc"><td class="mdescLeft">&#160;</td><td class="mdescRight">MCP radius seen by the camera in pixels. <a href="#a09f26b0a0fd940a3d8c6f92aa769c8bc">More...</a><br /></td></tr>
<tr class="separator:a09f26b0a0fd940a3d8c6f92aa769c8bc"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a4dcc00b93822f1663be2908b10d2ad3e"><td class="memItemLeft" align="right" valign="top">static const variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a4dcc00b93822f1663be2908b10d2ad3e">mcp_radius_mm</a> = 20</td></tr>
<tr class="memdesc:a4dcc00b93822f1663be2908b10d2ad3e"><td class="mdescLeft">&#160;</td><td class="mdescRight">physical size (radius) of the MCP in mm <a href="#a4dcc00b93822f1663be2908b10d2ad3e">More...</a><br /></td></tr>
<tr class="separator:a4dcc00b93822f1663be2908b10d2ad3e"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a0cb8da36beae05c79fe5b1da918d3897"><td class="memItemLeft" align="right" valign="top">static const variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a0cb8da36beae05c79fe5b1da918d3897">hemi_radius_mm</a> = 200</td></tr>
<tr class="memdesc:a0cb8da36beae05c79fe5b1da918d3897"><td class="mdescLeft">&#160;</td><td class="mdescRight">physical size (radius) of the hemisphere in mm <a href="#a0cb8da36beae05c79fe5b1da918d3897">More...</a><br /></td></tr>
<tr class="separator:a0cb8da36beae05c79fe5b1da918d3897"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a4749b9bce3e1d0381bd9daeb97c9754c"><td class="memItemLeft" align="right" valign="top">static const variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a4749b9bce3e1d0381bd9daeb97c9754c">mcp_radius_epass</a> = 0.04</td></tr>
<tr class="memdesc:a4749b9bce3e1d0381bd9daeb97c9754c"><td class="mdescLeft">&#160;</td><td class="mdescRight">energy range imaged on MCP relative to the pass energy <a href="#a4749b9bce3e1d0381bd9daeb97c9754c">More...</a><br /></td></tr>
<tr class="separator:a4749b9bce3e1d0381bd9daeb97c9754c"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>tools for analysing the Fermi edge measured by the Scienta EW4000 analyser. </p>
<p>proposed procedure</p>
<ul>
<li>angular normalization</li>
<li>fit curved fermi function</li>
<li>calculate corrected energy coordinates and map to single independent variable</li>
<li>fit normal fermi function</li>
</ul>
<dl class="section author"><dt>Author</dt><dd>matthias muntwiler, <a href="#" onclick="location.href='mai'+'lto:'+'mat'+'th'+'ias'+'.m'+'unt'+'wi'+'ler'+'@p'+'si.'+'ch'; return false;">matth<span style="display: none;">.nosp@m.</span>ias.<span style="display: none;">.nosp@m.</span>muntw<span style="display: none;">.nosp@m.</span>iler<span style="display: none;">.nosp@m.</span>@psi.<span style="display: none;">.nosp@m.</span>ch</a> </dd>
<dd>
thomas dienel</dd></dl>
<dl class="section copyright"><dt>Copyright</dt><dd>2013-15 Paul Scherrer Institut <br />
Licensed under the Apache License, Version 2.0 (the "License"); <br />
you may not use this file except in compliance with the License. <br />
You may obtain a copy of the License at <a href="http://www.apache.org/licenses/LICENSE-2.0">http://www.apache.org/licenses/LICENSE-2.0</a> </dd></dl>
<p>Definition in file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div><h2 class="groupheader">Function Documentation</h2>
<a class="anchor" id="a1c4a805435a1d43c2b6dfb6deb633894"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable analyse_curved_edge </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00027">27</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="ad23de34bb698589e2576ce2836b89d55"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable analyser_energy_resolution </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>epass</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>slit</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>calculate the energy resolution of the analyser </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">epass</td><td>pass energy in eV </td></tr>
<tr><td class="paramname">slit</td><td>analyser entrance slit in mm</td></tr>
</table>
</dd>
</dl>
<dl class="section return"><dt>Returns</dt><dd>energy resolution (FWHM) </dd></dl>
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00306">306</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a520d8de9fbc4276c19fb417861f05b0d"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">threadsafe variable FermiFuncLinDOS2D_corr </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">threadsafe&#160;</td>
<td class="paramname"><em>x</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>y</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00216">216</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a2a1d7b49c1f88f29ee6d49f6a6f4fbf8"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable integrate_curved_edge </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data_sig</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00116">116</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="aac6bac1ee0582caa0676bdc9c2d254f0"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable record_results </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>index</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00098">98</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="acf72d644b8d37b6c26b1e070edba4e30"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable show_shift </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00284">284</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a4cec596c8fd2b21953cb45d6d347211d"></a>
<div class="memitem">
<div class="memproto">
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<tr>
<td class="memname">variable slit_correction </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data_out</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>epass</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00173">173</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a27f000c3a3ea74c49db31716be3396d4"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
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<td class="memname">threadsafe variable slit_shift </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>ypix</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>epass</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00267">267</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<h2 class="groupheader">Variable Documentation</h2>
<a class="anchor" id="a0cb8da36beae05c79fe5b1da918d3897"></a>
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<td class="memname">const variable hemi_radius_mm = 200</td>
</tr>
</table>
</td>
<td class="mlabels-right">
<span class="mlabels"><span class="mlabel">static</span></span> </td>
</tr>
</table>
</div><div class="memdoc">
<p>physical size (radius) of the hemisphere in mm </p>
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00263">263</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a4749b9bce3e1d0381bd9daeb97c9754c"></a>
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<tr>
<td class="mlabels-left">
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<td class="memname">const variable mcp_radius_epass = 0.04</td>
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p>energy range imaged on MCP relative to the pass energy </p>
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00265">265</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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<td class="memname">const variable mcp_radius_mm = 20</td>
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p>physical size (radius) of the MCP in mm </p>
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00261">261</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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<td class="memname">const variable mcp_radius_pix = 555</td>
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p>MCP radius seen by the camera in pixels. </p>
<p>Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00259">259</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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&#160;<span id="projectnumber">rev-distro-2.0.2-0-g3235d52</span>
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<div class="textblock"><h1><a class="anchor" id="sec_intro"></a>
Introduction</h1>
<p>PEARL Procedures is a suite of Igor Pro procedures developed for data acquisition and data processing at the PEARL beamline at the Swiss Light Source.</p>
@ -112,7 +98,7 @@ Installation</h1>
<p>PEARL Procedures should be installed according to the regular Igor Pro guidelines. Please read the Igor help <code>About Igor Pro User Files</code> for details.</p>
<ul>
<li>Make a <code>pearl-procs</code> directory in your private or shared <code>User Procedures</code> folder, and copy the PEARL Procedures distribution there.</li>
<li>Create shortcuts of the <code><a class="el" href="pearl-arpes_8ipf.html" title="data acquisition and analysis package for ARPES at PEARL. ">pearl-arpes.ipf</a></code> and <code><a class="el" href="pearl-menu_8ipf.html">pearl-menu.ipf</a></code> files, and move them to the <code>Igor Procedures</code> folder next to your <code>User Procedures</code> folder.</li>
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<li>Find the <code>HDF5.XOP</code> extension in the <code>Igor Pro Folder</code> under <code>More Extensions/File Loaders</code>, create a shortcut, and move the shortcut to the <code>Igor Extensions</code> folder next to your <code>User Procedures</code> folder.</li>
<li>Find the <code>HDF5 Help.ihf</code> next to <code>HDF5.XOP</code>, create a shortcut, and move the shortcut to the <code>Igor Help Files</code> folder next to your <code>User Procedures</code> folder.</li>
</ul>
@ -120,7 +106,7 @@ Installation</h1>
License Information</h1>
<p>An open distribution of PEARL Procedures is available under the <a href="http://www.apache.org/licenses/LICENSE-2.0">Apache License, Version 2.0</a> at <a href="https://git.psi.ch/pearl-public/igor-procs">https://git.psi.ch/pearl-public/igor-procs</a>. Users of PEARL Procedures are requested to coordinate and share the development of the code with the original author. Please read and respect the respective license agreements.</p>
<dl class="section author"><dt>Author</dt><dd>Matthias Muntwiler, <a href="#" onclick="location.href='mai'+'lto:'+'mat'+'th'+'ias'+'.m'+'unt'+'wi'+'ler'+'@p'+'si.'+'ch'; return false;">matth<span style="display: none;">.nosp@m.</span>ias.<span style="display: none;">.nosp@m.</span>muntw<span style="display: none;">.nosp@m.</span>iler<span style="display: none;">.nosp@m.</span>@psi.<span style="display: none;">.nosp@m.</span>ch</a> </dd></dl>
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<dl class="section version"><dt>Version</dt><dd>This documentation is compiled from version rev-distro-2.0.2-0-g3235d52. </dd></dl>
<dl class="section copyright"><dt>Copyright</dt><dd>2009-2016 by <a href="http://www.psi.ch">Paul Scherrer Institut</a> </dd>
<dd>
Licensed under the <a href="http://www.apache.org/licenses/LICENSE-2.0">Apache License, Version 2.0</a> </dd></dl>
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<div id="projectname">PEARL Procedures
&#160;<span id="projectnumber">rev-distro-2.0.2-0-g3235d52</span>
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<div id="projectbrief">Igor procedures for the analysis of PEARL data</div>
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<div class="title">Angle-scan processing </div> </div>
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<div class="toc"><h3>Table of Contents</h3>
<ul><li class="level1"><a href="#sec_intro">Introduction</a></li>
<li class="level1"><a href="#sec_import">Data reduction</a><ul><li class="level2"><a href="#sec_import_basics">Basic steps</a></li>
<li class="level2"><a href="#sec_import_intlinbg">Peak integration over linear background</a></li>
<li class="level2"><a href="#sec_import_peakfit">Peak fitting</a></li>
<li class="level2"><a href="#sec_import_custom">Custom reduction functions</a></li>
</ul>
</li>
<li class="level1"><a href="#sec_norm">Normalization</a><ul><li class="level2"><a href="#sec_norm_prep">Preparations</a></li>
<li class="level2"><a href="#sec_norm_crop">Detector angle range</a></li>
<li class="level2"><a href="#sec_norm_angle">Normalize detector angle</a></li>
<li class="level2"><a href="#sec_norm_wobble">Azimuthal variation (wobble)</a></li>
<li class="level2"><a href="#sec_norm_theta">Polar dependence</a></li>
</ul>
</li>
<li class="level1"><a href="#sec_plot">Binning and plotting</a><ul><li class="level2"><a href="#sec_plot_basics">Basic steps</a></li>
<li class="level2"><a href="#sec_plot_refine">Refinements</a></li>
<li class="level2"><a href="#sec_plot_interp">Interpolation</a></li>
<li class="level2"><a href="#sec_modulation">Modulation function</a></li>
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<li class="level1"><a href="#sec_export">Data export</a><ul><li class="level2"><a href="#sec_export_plot">Export picture</a></li>
<li class="level2"><a href="#sec_export_data">Export processed data</a></li>
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<div class="textblock"><h1><a class="anchor" id="sec_intro"></a>
Introduction</h1>
<p>This page describes the data processing steps of angle-scans using the PEARL Procedures. The description relies on using the command line regardless of available GUIs.</p>
<h1><a class="anchor" id="sec_import"></a>
Data reduction</h1>
<p>The goal of this step is to import raw data and at the same time eliminate the energy dimension. We want a two-dimensional wave where the first dimension is the angle axis of the detector and the second dimension is the sequence of measurements, scanning one or multiple manipulator angles. The second dimension requires additional one-dimensional waves that describe the polar, tilt and azimuthal angle setting of the manipulator for each dimension index.</p>
<p>The processing steps depend on the complexity of the measured spectrum. The user may have to adopt one of the predefined or a custom procedure accordingly. Here, we describe two procedures that may cover many generic cases or that can serve as a starting point for a refined, customized procedure. However, any procedure that produces the datasets mentioned above is, of course, a valid approach. For instance, you could load the complete three-dimensional ScientaImage dataset, and generate the two-dimensional dataset using your own procedures.</p>
<h2><a class="anchor" id="sec_import_basics"></a>
Basic steps</h2>
<p>The central import functions are psh5_load_reduced and psh5_load_dataset_reduced. The first form is sufficient if the file contains just one scan and region. Further regions/scans need to be loaded using the second form. The first form is also exposed in the PEARL data explorer window.</p>
<p>The functions require a data reduction function and processing parameters as arguments. Some particular reduction functions are described further below. More can be found in the source code (or obtained from other users). A list of functions that look like reduction functions can be got from adh5_list_reduction_funcs.</p>
<p>The basic call sequence looks as follows. Substitute the arguments in angle brackets as necessary. You may have to analyse a reference spectrum or the complete ScientaImage to figure out the processing parameters beforehand.</p>
<p>First form:</p>
<div class="fragment"><div class="line">setdatafolder root:</div><div class="line"><span class="keywordtype">string</span> sparam</div><div class="line">sparam = <span class="stringliteral">&quot;&lt;param1=1.5;param2=test;&gt;&quot;</span></div><div class="line">psh5_load_reduced(<span class="stringliteral">&quot;&lt;igor-datafolder&gt;&quot;</span>, <span class="stringliteral">&quot;&lt;igor-filepath&gt;&quot;</span>, <span class="stringliteral">&quot;&lt;filename&gt;&quot;</span>, &lt;reduction_function&gt;, sparam)</div></div><!-- fragment --><p>Second form:</p>
<div class="fragment"><div class="line"><span class="comment">// open the file</span></div><div class="line">setdatafolder root: <span class="comment">// or other parent folder</span></div><div class="line">variable fid</div><div class="line"><span class="keywordtype">string</span> sparam</div><div class="line">fid = psh5_open_file(<span class="stringliteral">&quot;&lt;igor-datafolder&gt;&quot;</span>, <span class="stringliteral">&quot;&lt;igor-filepath&gt;&quot;</span>, <span class="stringliteral">&quot;&lt;filename&gt;&quot;</span>)</div><div class="line"></div><div class="line"><span class="comment">// load metadata for scaling</span></div><div class="line">psh5_load_scan_meta(fileID, &quot;&lt;scan 1&gt;&quot;)</div><div class="line">newdatafolder /s /o attr</div><div class="line">psh5_load_scan_attrs(fileID, &quot;&lt;scan 1&gt;&quot;)</div><div class="line">setdatafolder ::</div><div class="line"></div><div class="line"><span class="comment">// load and reduce dataset</span></div><div class="line">sparam = &quot;&lt;param1=1.5;param2=test;&gt;&quot;</div><div class="line">psh5_load_dataset_reduced(fid, &quot;&lt;scan 1/region1&gt;&quot;, &quot;&lt;ScientaImage&gt;&quot;, &lt;reduction_function&gt;, sparam)</div><div class="line"></div><div class="line"><span class="comment">// close the file</span></div><div class="line">psh5_close_file(fid)</div><div class="line">fid = 0</div></div><!-- fragment --><h2><a class="anchor" id="sec_import_intlinbg"></a>
Peak integration over linear background</h2>
<p>The int_linbg_reduction function converts a two-dimensional Scienta image I(angle, energy) into a one-dimensional angle distribution I(angle). For each angle slice, it calculates a linear background. Then, it integrates the difference between the original data and the background over a specified interval.</p>
<p>The function requires the following, fixed parameters:</p>
<table class="doxtable">
<tr>
<th>Parameter </th><th>Description </th><th>Typical value </th></tr>
<tr>
<td>Lcrop </td><td>size of the low-energy cropping region </td><td>0.11 (fixed mode) </td></tr>
<tr>
<td>Lsize </td><td>size of the low-energy background region </td><td>0.2 </td></tr>
<tr>
<td>Hcrop </td><td>size of the high-energy cropping region </td><td>0.11 </td></tr>
<tr>
<td>Hsize </td><td>size of the high-energy background region </td><td>0.2 </td></tr>
<tr>
<td>Cpos </td><td>position of the peak center </td><td>0.5 </td></tr>
<tr>
<td>Csize </td><td>size of the center region </td><td>0.3 </td></tr>
</table>
<p>All parameters are relative to the size of the image (length of the energy interval) and must be in the range from 0 to 1.</p>
<p>The cropping region is cut away from the image for the rest of the processing. This is necessary to remove the dark corners in fixed mode but can be neglected in swept mode (cropping size = 0).</p>
<p>The low and high background regions are adjacent to the cropping regions on either side. The function calculates two fix points of the linear background in the center of each background region. The intensity value of each fix point is the average intensity in the background region.</p>
<p>The peak region is integrated over the integral given by the Csize parameter centered at Cpos.</p>
<p>The background-subtracted peak integral is returned in ReducedData1. ReducedData2 receives the error estimate of the peak integral (assuming Poisson statistics).</p>
<h2><a class="anchor" id="sec_import_peakfit"></a>
Peak fitting</h2>
<p>The gauss4_reduction function converts a two-dimensional Scienta image I(angle, energy) into a one-dimensional angle distribution I(angle). For each angle slice, it performs a Gaussian curve fit with up to four components on a linear background.</p>
<p>To improve the stability of the fit, the peak positions and widths are kept fixed while the amplitudes of the peaks and the background parameters are variable but constrained to reasonable values (positive amplitude). Furthermore, the function can optionally do a box averaging over three slices.</p>
<p>The function requires the following, fixed parameters:</p>
<table class="doxtable">
<tr>
<th>Parameter </th><th>Description </th></tr>
<tr>
<td>rngl </td><td>lower limit of the fit interval </td></tr>
<tr>
<td>rngh </td><td>upper limit of the fit interval </td></tr>
<tr>
<td>npeaks </td><td>number of components </td></tr>
<tr>
<td>pos1 </td><td>center energy of peak 1 </td></tr>
<tr>
<td>wid1 </td><td>width of peak 1 </td></tr>
<tr>
<td>pos2 </td><td>center energy of peak 2 </td></tr>
<tr>
<td>wid2 </td><td>width of peak 2 </td></tr>
<tr>
<td>pos3 </td><td>center energy of peak 3 </td></tr>
<tr>
<td>wid3 </td><td>width of peak 3 </td></tr>
<tr>
<td>pos4 </td><td>center energy of peak 3 </td></tr>
<tr>
<td>wid4 </td><td>width of peak 3 </td></tr>
<tr>
<td>ybox </td><td>box size of slice averaging (1 or 3) </td></tr>
</table>
<p>The peak parameters should be determined beforehand from fitting a reference spectrum, or the angle-scan integrated over all angles. Peak positions and widths have to be specified only up to the given number of peaks.</p>
<p>The data reduction procedure returns the peak integrals (amplitude times width times square root of 2) in waves named ReducedDataN where N is a numeric index from 1 to npeaks. The waves starting with an index of npeaks+1 contain the corresponding error estimate of the peak integral.</p>
<h2><a class="anchor" id="sec_import_custom"></a>
Custom reduction functions</h2>
<p>See the documentation and source code of int_linbg_reduction, gauss4_reduction and adh5_default_reduction for help on writing custom reduction functions. To integrate your function with the PEARL data explorer, you have to provide an additional function that prompts for reduction parameters such as prompt_int_linbg_reduction, for example. Since reduction functions cannot be called from the command line, it is redommended to also write an adapter function for testing.</p>
<h1><a class="anchor" id="sec_norm"></a>
Normalization</h1>
<p>The goal of the data normalization is to get a (still two-dimensional) dataset that ideally contains intensity variations due to diffraction features and statistical fluctuations only. In particular, instrumental variations should be removed. In some cases, it may be necessary to preserve the overall polar dependence of the intensity. Note that this latter case is not properly treated with the methods described here.</p>
<p>Depending on the quality of the measured data, only some of the following processing steps are necessary. Use your own judgement.</p>
<h2><a class="anchor" id="sec_norm_prep"></a>
Preparations</h2>
<p>Start by creating a new copy of the data and inspecting it: </p><div class="fragment"><div class="line">duplicate ReducedData1, NormData1</div><div class="line">ad_display_profiles(NormData1)</div></div><!-- fragment --><p>To update the display after changes to NormData1: </p><div class="fragment"><div class="line">ad_update_profiles(NormData1)</div></div><!-- fragment --><h2><a class="anchor" id="sec_norm_crop"></a>
Detector angle range</h2>
<p>Crop the detector angle axis to a useful range (usually about -25 to +25 degrees): </p><div class="fragment"><div class="line">crop_strip(NormData1, -25, 25)</div></div><!-- fragment --><h2><a class="anchor" id="sec_norm_angle"></a>
Normalize detector angle</h2>
<p>Remove inhomogeneity of the detector in the detector angle axis. This component may also include a contribution from the sample. If your raw data shows a flat distribution, this step is not necessary.</p>
<div class="fragment"><div class="line">normalize_strip_x(NormData1, smooth_method=4, smooth_factor=0.15, check=2)</div></div><!-- fragment --><p>Note that the argument <code>check=2</code> causes the function to generate two check waves but not to modify the original data. To inspect the check waves: </p><div class="fragment"><div class="line">display check_dist, check_smoo</div><div class="line">ModifyGraph rgb(check_dist)=(0,0,0)</div></div><!-- fragment --><p>Vary the <code>smooth_factor</code> (between 0.1 and 1.0) until it follows the instrumental curve but does not affect diffraction features. Then set <code>check=1</code> to apply the normalization to <code>NormData1</code>.</p>
<h2><a class="anchor" id="sec_norm_wobble"></a>
Azimuthal variation (wobble)</h2>
<p>Reduce the effect of azimuthal wobble (misaligned surface) on intensity. A misaligned surface may cause a sinusoidal variation of the intensity as a function of azimuthal angle with a 360 period. A strong azimuthal variation may affect the polar normalization in the next step. The azimuthal normalization can be based on a restricted range of polar angles (theta range). You have to find out which value works best for your sample.</p>
<div class="fragment"><div class="line">normalize_strip_phi(NormData1, :attr:ManipulatorTheta, :attr:ManipulatorPhi, theta_offset=-8.8, theta_range=10, check=2)</div></div><!-- fragment --><p>Note, however, that his function does not correct for angle shifts induced by the misalignment!</p>
<h2><a class="anchor" id="sec_norm_theta"></a>
Polar dependence</h2>
<p>Remove the polar angle dependence (matrix element and excitation/detection geometry).</p>
<div class="fragment"><div class="line">normalize_strip_theta(NormData1, :attr:ManipulatorTheta, theta_offset=-8.8, smooth_method=4, smooth_factor=0.5, check=2)</div></div><!-- fragment --><p>Use the check waves and the <code>check</code> argument as described above.</p>
<h1><a class="anchor" id="sec_plot"></a>
Binning and plotting</h1>
<h2><a class="anchor" id="sec_plot_basics"></a>
Basic steps</h2>
<p>You can bin and plot the data in one step:</p>
<div class="fragment"><div class="line">pizza_service(NormData1, <span class="stringliteral">&quot;Nickname1&quot;</span>, -8.8, 0.5, 6)</div></div><!-- fragment --><p>or two steps:</p>
<div class="fragment"><div class="line">pizza_service(NormData1, <span class="stringliteral">&quot;Nickname2&quot;</span>, -8.8, 0.5, 6, nograph=1)</div><div class="line">display_hemi_scan(&quot;Nickname2&quot;)</div></div><!-- fragment --><p>The benefit of the latter is that you have more control over the graph through optional arguments. In particular, you can select the projection or hide the ticks and grids. See display_hemi_scan for details.</p>
<p>The pizza_service function requires the waves with manipulator positions in a specific place, namely <code>:attr:ManipulatorTheta</code> (for the polar angle), and the normal emission values as function arguments. If you have moved the waves, or if you have subtracted the offsets yourself, use the alternative pizza_service_2 function.</p>
<p>Additional parameters of the pizza_service function allow for rotational averaging, larger angle steps (default 1 degree), or the creation of metadata including a notebook for xpdPlot.</p>
<p>Note there is currently a bug in the nick name argument of some of the following functions. If the lines shown below do not work, try to switch to the data folder that contains the generated polar plot data, and call the function with an empty nickname <code>""</code>.</p>
<h2><a class="anchor" id="sec_plot_refine"></a>
Refinements</h2>
<p>To remove high polar angles above &theta; = 80 from the plot (and data):</p>
<div class="fragment"><div class="line">trim_hemi_scan(<span class="stringliteral">&quot;Nickname1&quot;</span>, 80)</div></div><!-- fragment --><p>Modify the pseudocolor scale by changing the <code>polarY0</code> trace:</p>
<div class="fragment"><div class="line">ModifyGraph zColor(polarY0)={mod_values, *, *, BlueGreenOrange, 0}</div><div class="line">ModifyGraph zColor(polarY0)={mod_values, -0.2, 0.2, BlueGreenOrange, 0}</div></div><!-- fragment --><p>To set the contrast to clip specified percentiles of the data points, use the </p><ul>
<li>set_contrast function:</li>
</ul>
<div class="fragment"><div class="line">set_contrast(2, 2, graphname=<span class="stringliteral">&quot;graph_Nickname1&quot;</span>, colortable=<span class="stringliteral">&quot;BlueGreenOrange&quot;</span>)</div></div><!-- fragment --><h2><a class="anchor" id="sec_plot_interp"></a>
Interpolation</h2>
<p>Polar plots can also be interpolated to a rectangular matrix, which may in some cases produce nicer images:</p>
<div class="fragment"><div class="line">interpolate_hemi_scan(<span class="stringliteral">&quot;Nickname1&quot;</span>)</div><div class="line">display_hemi_scan(&quot;Nickname1&quot;, graphtype=3, graphname=&quot;intp&quot;)</div><div class="line">matrix = sqrt(x^2 + y^2) &lt;= calc_graph_radius(80) ? matrix : nan</div><div class="line">ModifyImage matrix ctab= {*,*,BlueGreenOrange,0}</div></div><!-- fragment --><p>The <code>matrix =</code> line optionally removes artefacts at high polar angles. Replace the cut-off angle with your own.</p>
<h2><a class="anchor" id="sec_modulation"></a>
Modulation function</h2>
<p>To calculate the modulation function and substitute it in the graph:</p>
<div class="fragment"><div class="line">setdatafolder Nickname1</div><div class="line">calc_modulation(values, factor1=pol, factor2=az)</div><div class="line">ModifyGraph zColor(polarY0)={mod_values,-0.2,0.2,BlueGreenOrange,0}</div></div><!-- fragment --><h1><a class="anchor" id="sec_export"></a>
Data export</h1>
<h2><a class="anchor" id="sec_export_plot"></a>
Export picture</h2>
<p>The following line is an example of how to export a graph window. Click on the desired graph window, then issue the following command, substituting the file path and file name as appropriate.</p>
<div class="fragment"><div class="line">SavePICT/P=home/E=-5/B=144/O as <span class="stringliteral">&quot;some_filename.png&quot;</span></div></div><!-- fragment --><h2><a class="anchor" id="sec_export_data"></a>
Export processed data</h2>
<p>The following line saves the dataset to an Igor text file. The file contains all data necessary to recreate a polar plot without further processing.</p>
<div class="fragment"><div class="line">save_hemi_scan(<span class="stringliteral">&quot;Nickname1&quot;</span>, <span class="stringliteral">&quot;home&quot;</span>, <span class="stringliteral">&quot;some_filename&quot;</span>)</div></div><!-- fragment --><p>For structural optimization using the PMSCO software, it is necessary to generate an ETPI file. There is currently no special function for this. Instead, you have to create and set an energy wave,</p>
<div class="fragment"><div class="line">duplicate pol, en</div><div class="line">en = 123.4 <span class="comment">// kinetic energy of the photoelectron</span></div></div><!-- fragment --><p>and write the four waves <code>en, pol, az, values</code> to a general text file. Be careful about the ordering of the waves! You will also have to rename the file to the <code>.etpi</code> extension because Igor always saves with <code>.txt</code> extension. If you have a wave with statistical errors, add a fifth column and use the <code>.etpis</code> extension.</p>
<div class="fragment"><div class="line">Save /G /M=<span class="stringliteral">&quot;\n&quot;</span> /O /P=home en, pol, az, values, sig as <span class="stringliteral">&quot;Nickname1.etpis.txt&quot;</span></div></div><!-- fragment --> </div></div><!-- contents -->
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<p>profile extraction for multi-dimensional datasets acquired from area detectors.
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Functions</h2></td></tr>
<tr class="memitem:a8de5d4f1bcca91df5bbff568ab7b582d"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#a8de5d4f1bcca91df5bbff568ab7b582d">ad_extract_rod</a> (wave dataset, variable x1, variable x2, variable y1, variable y2, variable z1, variable z2, string destname, variable noavg=defaultValue, variable sdev=defaultValue, variable pscale=defaultValue)</td></tr>
<tr class="memdesc:a8de5d4f1bcca91df5bbff568ab7b582d"><td class="mdescLeft">&#160;</td><td class="mdescRight">1D cut through 3D dataset, integrate in normal dimensions <a href="#a8de5d4f1bcca91df5bbff568ab7b582d">More...</a><br /></td></tr>
<tr class="separator:a8de5d4f1bcca91df5bbff568ab7b582d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a83700e2faf844e2480c89b6ca4c66a79"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#a83700e2faf844e2480c89b6ca4c66a79">ad_extract_rod_x</a> (wave dataset, variable q1, variable q2, variable r1, variable r2, string destname, variable noavg=defaultValue, variable sdev=defaultValue)</td></tr>
<tr class="memdesc:a83700e2faf844e2480c89b6ca4c66a79"><td class="mdescLeft">&#160;</td><td class="mdescRight">1D cut through 3D dataset along X dimension. <a href="#a83700e2faf844e2480c89b6ca4c66a79">More...</a><br /></td></tr>
<tr class="separator:a83700e2faf844e2480c89b6ca4c66a79"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a363af257a04d51fff2a8d5b282f65f21"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#a363af257a04d51fff2a8d5b282f65f21">ad_extract_rod_y</a> (wave dataset, variable p1, variable p2, variable r1, variable r2, string destname, variable noavg=defaultValue, variable sdev=defaultValue)</td></tr>
<tr class="memdesc:a363af257a04d51fff2a8d5b282f65f21"><td class="mdescLeft">&#160;</td><td class="mdescRight">1D cut through 3D dataset along Y dimension. <a href="#a363af257a04d51fff2a8d5b282f65f21">More...</a><br /></td></tr>
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<tr class="memdesc:a3483707fbdbfdbaec069591a5d3b07a6"><td class="mdescLeft">&#160;</td><td class="mdescRight">1D cut through 3D dataset along Z dimension. <a href="#a3483707fbdbfdbaec069591a5d3b07a6">More...</a><br /></td></tr>
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<tr class="memitem:a65bb359c057a9d900c486e186c9974df"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#a65bb359c057a9d900c486e186c9974df">ad_extract_slab</a> (wave dataset, variable x1, variable x2, variable y1, variable y2, variable z1, variable z2, string destname, variable noavg=defaultValue, variable pscale=defaultValue)</td></tr>
<tr class="memdesc:a65bb359c057a9d900c486e186c9974df"><td class="mdescLeft">&#160;</td><td class="mdescRight">2D cut through 3D dataset, integrate in normal dimension <a href="#a65bb359c057a9d900c486e186c9974df">More...</a><br /></td></tr>
<tr class="separator:a65bb359c057a9d900c486e186c9974df"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:af612340d1d132cacda9de7bb77c2e0aa"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#af612340d1d132cacda9de7bb77c2e0aa">ad_extract_slab_x</a> (wave dataset, variable p1, variable p2, string destname, variable noavg=defaultValue)</td></tr>
<tr class="separator:af612340d1d132cacda9de7bb77c2e0aa"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a2eb6a0bcced893e827cfa4e1236e8460"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#a2eb6a0bcced893e827cfa4e1236e8460">ad_extract_slab_y</a> (wave dataset, variable q1, variable q2, string destname, variable noavg=defaultValue)</td></tr>
<tr class="separator:a2eb6a0bcced893e827cfa4e1236e8460"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a71f02613c4a4d21c014493e906dbe922"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#a71f02613c4a4d21c014493e906dbe922">ad_extract_slab_z</a> (wave dataset, variable r1, variable r2, string destname, variable noavg=defaultValue)</td></tr>
<tr class="separator:a71f02613c4a4d21c014493e906dbe922"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ab1a65cf82f6933db3dd7b564582e8ed1"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#ab1a65cf82f6933db3dd7b564582e8ed1">ad_profile_x</a> (wave dataset, variable q1, variable q2, string destname, variable noavg=defaultValue)</td></tr>
<tr class="memdesc:ab1a65cf82f6933db3dd7b564582e8ed1"><td class="mdescLeft">&#160;</td><td class="mdescRight">1D cut through 2D dataset along X dimension, new destination wave. <a href="#ab1a65cf82f6933db3dd7b564582e8ed1">More...</a><br /></td></tr>
<tr class="separator:ab1a65cf82f6933db3dd7b564582e8ed1"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aa40fd5049f993e72fd52a66a6cdde7cc"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#aa40fd5049f993e72fd52a66a6cdde7cc">ad_profile_x_w</a> (wave dataset, variable q1, variable q2, wave destwave, variable noavg=defaultValue)</td></tr>
<tr class="memdesc:aa40fd5049f993e72fd52a66a6cdde7cc"><td class="mdescLeft">&#160;</td><td class="mdescRight">1D cut through 2D dataset along X dimension, existing destination wave. <a href="#aa40fd5049f993e72fd52a66a6cdde7cc">More...</a><br /></td></tr>
<tr class="separator:aa40fd5049f993e72fd52a66a6cdde7cc"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:abb1eed32a982037ebab00f5c3ea95e62"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#abb1eed32a982037ebab00f5c3ea95e62">ad_profile_y</a> (wave dataset, variable p1, variable p2, string destname, variable noavg=defaultValue)</td></tr>
<tr class="memdesc:abb1eed32a982037ebab00f5c3ea95e62"><td class="mdescLeft">&#160;</td><td class="mdescRight">1D cut through 2D dataset along Y dimension, new destination wave. <a href="#abb1eed32a982037ebab00f5c3ea95e62">More...</a><br /></td></tr>
<tr class="separator:abb1eed32a982037ebab00f5c3ea95e62"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a8b09e13162fa47cc076e1e661e80b002"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#a8b09e13162fa47cc076e1e661e80b002">ad_profile_y_w</a> (wave dataset, variable p1, variable p2, wave destwave, variable noavg=defaultValue)</td></tr>
<tr class="memdesc:a8b09e13162fa47cc076e1e661e80b002"><td class="mdescLeft">&#160;</td><td class="mdescRight">1D cut through 2D dataset along X dimension, existing destination wave. <a href="#a8b09e13162fa47cc076e1e661e80b002">More...</a><br /></td></tr>
<tr class="separator:a8b09e13162fa47cc076e1e661e80b002"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ab58b7c0a88743ecbcb0fc8296577a792"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#ab58b7c0a88743ecbcb0fc8296577a792">calc_y_profile_mins</a> (wave image)</td></tr>
<tr class="separator:ab58b7c0a88743ecbcb0fc8296577a792"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a3cadf0b28d1fd84e9922610c20868283"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-area-profiles_8ipf.html#a3cadf0b28d1fd84e9922610c20868283">ad_collect_multiscan_y</a> (wave dataset, wave positions, wave destwave, variable noavg=defaultValue)</td></tr>
<tr class="memdesc:a3cadf0b28d1fd84e9922610c20868283"><td class="mdescLeft">&#160;</td><td class="mdescRight">collect profiles from a multi-scan. <a href="#a3cadf0b28d1fd84e9922610c20868283">More...</a><br /></td></tr>
<tr class="separator:a3cadf0b28d1fd84e9922610c20868283"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>profile extraction for multi-dimensional datasets acquired from area detectors. </p>
<dl class="section author"><dt>Author</dt><dd>matthias muntwiler, <a href="#" onclick="location.href='mai'+'lto:'+'mat'+'th'+'ias'+'.m'+'unt'+'wi'+'ler'+'@p'+'si.'+'ch'; return false;">matth<span style="display: none;">.nosp@m.</span>ias.<span style="display: none;">.nosp@m.</span>muntw<span style="display: none;">.nosp@m.</span>iler<span style="display: none;">.nosp@m.</span>@psi.<span style="display: none;">.nosp@m.</span>ch</a></dd></dl>
<dl class="section copyright"><dt>Copyright</dt><dd>2013-15 Paul Scherrer Institut <br />
Licensed under the Apache License, Version 2.0 (the "License"); <br />
you may not use this file except in compliance with the License. <br />
You may obtain a copy of the License at <a href="http://www.apache.org/licenses/LICENSE-2.0">http://www.apache.org/licenses/LICENSE-2.0</a> </dd></dl>
<p>Definition in file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
</div><h2 class="groupheader">Function Documentation</h2>
<a class="anchor" id="a3cadf0b28d1fd84e9922610c20868283"></a>
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<td class="memname">variable ad_collect_multiscan_y </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>dataset</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>positions</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>destwave</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>noavg</em> = <code>defaultValue</code>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>collect profiles from a multi-scan. </p>
<dl class="section warning"><dt>Warning</dt><dd>experimental: name and interface of this function may change. </dd></dl>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00621">621</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
</div>
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<td class="memname">threadsafe wave ad_extract_rod </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>dataset</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>y1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>y2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>z1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>z2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>destname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>noavg</em> = <code>defaultValue</code>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>sdev</em> = <code>defaultValue</code>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>pscale</em> = <code>defaultValue</code>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>1D cut through 3D dataset, integrate in normal dimensions </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">dataset</td><td></td></tr>
<tr><td class="paramname">x1,x2,y1,y2,z1,z2</td><td>coordinates of integration region by default, the coordinates use wave scaling coordinates of rod dimensions (to be preserved) must be nan coordinate pairs don't have to be ordered, i.e. both x1 &lt;= x2 and x1 &gt;= x2 are allowed. </td></tr>
<tr><td class="paramname">destname</td><td>name of destination wave. to be created in current data folder. if empty, the function returns a free wave </td></tr>
<tr><td class="paramname">noavg</td><td>non-zero = calculate the sum, default = 0 as of version 1.05, this option should rather be called "calc_sum" or similar. it is noavg for compatibility with older code. </td></tr>
<tr><td class="paramname">sdev</td><td>non-zero = calculate the standard deviation, default = 0 by default, the function calculates the average of the integration region set either the noavg or sdev option to select the sum or the standard deviation, respectively. if both options are set, noavg (sum) takes precedence. </td></tr>
<tr><td class="paramname">pscale</td><td>scaling of the slab coordinates x1, x2, ..., z2: zero or default = wave scaling, non-zero = point scaling</td></tr>
</table>
</dd>
</dl>
<dl class="section remark"><dt>Remarks</dt><dd><ul>
<li>version 1.02: the specification of the destination coordinates has changed</li>
<li>version 1.04: the function returns an empty wave reference if an error occurred </li>
</ul>
</dd></dl>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00054">54</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<td class="memname">threadsafe wave ad_extract_rod_x </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>dataset</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>q1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>q2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>r1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>r2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>destname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>noavg</em> = <code>defaultValue</code>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>sdev</em> = <code>defaultValue</code>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>1D cut through 3D dataset along X dimension. </p>
<p>see <a class="el" href="pearl-area-profiles_8ipf.html#a8de5d4f1bcca91df5bbff568ab7b582d" title="1D cut through 3D dataset, integrate in normal dimensions ">ad_extract_rod()</a> for descriptions of common parameters. </p>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00106">106</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<td class="memname">threadsafe wave ad_extract_rod_y </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>dataset</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>p1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>p2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>r1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>r2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>destname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>noavg</em> = <code>defaultValue</code>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>sdev</em> = <code>defaultValue</code>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>1D cut through 3D dataset along Y dimension. </p>
<p>see <a class="el" href="pearl-area-profiles_8ipf.html#a8de5d4f1bcca91df5bbff568ab7b582d" title="1D cut through 3D dataset, integrate in normal dimensions ">ad_extract_rod()</a> for descriptions of common parameters. </p>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00168">168</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<td class="memname">threadsafe wave ad_extract_rod_z </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>dataset</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>p1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>p2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>q1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>q2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>destname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>noavg</em> = <code>defaultValue</code>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>sdev</em> = <code>defaultValue</code>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>1D cut through 3D dataset along Z dimension. </p>
<p>see <a class="el" href="pearl-area-profiles_8ipf.html#a8de5d4f1bcca91df5bbff568ab7b582d" title="1D cut through 3D dataset, integrate in normal dimensions ">ad_extract_rod()</a> for descriptions of common parameters. </p>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00231">231</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<td class="memname">threadsafe wave ad_extract_slab </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>dataset</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>y1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>y2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>z1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>z2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>destname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>noavg</em> = <code>defaultValue</code>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>pscale</em> = <code>defaultValue</code>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>2D cut through 3D dataset, integrate in normal dimension </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">dataset</td><td></td></tr>
<tr><td class="paramname">x1,x2,y1,y2,z1,z2</td><td>coordinates of integration region. by default, the coordinates use wave scaling. coordinates of slab dimensions (to be preserved) must be nan. coordinate pairs don't have to be ordered, i.e. both x1 &lt;= x2 and x1 &gt;= x2 are allowed. coordinates can be out of range (-inf and +inf allowed) to select the whole range. </td></tr>
<tr><td class="paramname">destname</td><td>name of destination wave. to be created in current data folder. if empty, the function returns a free wave. </td></tr>
<tr><td class="paramname">noavg</td><td>zero or default = average, non-zero = sum. </td></tr>
<tr><td class="paramname">pscale</td><td>scaling of the slab coordinates x1, x2, ..., z2: zero or default = wave scaling, non-zero = point scaling.</td></tr>
</table>
</dd>
</dl>
<dl class="section remark"><dt>Remarks</dt><dd><ul>
<li>version 1.02: the specification of the destination coordinates has changed</li>
<li>version 1.04: the function returns an empty wave reference if an error occurred </li>
</ul>
</dd></dl>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00313">313</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<td class="memname">threadsafe wave ad_extract_slab_x </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>dataset</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>p1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>p2</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
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<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00358">358</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<td class="memname">threadsafe wave ad_extract_slab_y </td>
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<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00398">398</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00438">438</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<p>1D cut through 2D dataset along X dimension, new destination wave. </p>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00480">480</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<p>1D cut through 2D dataset along X dimension, existing destination wave. </p>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00504">504</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<p>1D cut through 2D dataset along Y dimension, new destination wave. </p>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00542">542</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>dataset</em>, </td>
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<tr>
<td class="paramkey"></td>
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<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>p1</em>, </td>
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<td class="paramkey"></td>
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<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>p2</em>, </td>
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<td class="paramname"><em>destwave</em>, </td>
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<p>1D cut through 2D dataset along X dimension, existing destination wave. </p>
<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00567">567</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<td class="memname">threadsafe variable calc_y_profile_mins </td>
<td>(</td>
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<p>Definition at line <a class="el" href="pearl-area-profiles_8ipf_source.html#l00603">603</a> of file <a class="el" href="pearl-area-profiles_8ipf_source.html">pearl-area-profiles.ipf</a>.</p>
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<p>data acquisition and analysis package for ARPES at PEARL.
<a href="#details">More...</a></p>
<div class="textblock"><code>#include &quot;pearl-area-display&quot;</code><br />
<code>#include &quot;pearl-area-profiles&quot;</code><br />
<code>#include &quot;pearl-area-import&quot;</code><br />
<code>#include &quot;pearl-pshell-import&quot;</code><br />
<code>#include &quot;pearl-data-explorer&quot;</code><br />
<code>#include &quot;pearl-anglescan-process&quot;</code><br />
<code>#include &quot;pearl-anglescan-panel&quot;</code><br />
<code>#include &quot;pearl-anglescan-tracker&quot;</code><br />
<code>#include &quot;pearl-scienta-preprocess&quot;</code><br />
<code>#include &quot;pearl-elog&quot;</code><br />
</div>
<p><a href="pearl-arpes_8ipf_source.html">Go to the source code of this file.</a></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="namespaces"></a>
Namespaces</h2></td></tr>
<tr class="memitem:namespace_pearl_arpes"><td class="memItemLeft" align="right" valign="top"> &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespace_pearl_arpes.html">PearlArpes</a></td></tr>
<tr class="memdesc:namespace_pearl_arpes"><td class="mdescLeft">&#160;</td><td class="mdescRight">data acquisition and analysis package for ARPES at PEARL. <br /></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
Functions</h2></td></tr>
<tr class="memitem:a8e4eacc6efacf2c65615c1ea72d722ed"><td class="memItemLeft" align="right" valign="top">static variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-arpes_8ipf.html#a8e4eacc6efacf2c65615c1ea72d722ed">AfterCompiledHook</a> ()</td></tr>
<tr class="memdesc:a8e4eacc6efacf2c65615c1ea72d722ed"><td class="mdescLeft">&#160;</td><td class="mdescRight">initializes package data once when the procedure is first loaded <a href="#a8e4eacc6efacf2c65615c1ea72d722ed">More...</a><br /></td></tr>
<tr class="separator:a8e4eacc6efacf2c65615c1ea72d722ed"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ac41f24572943dac2b40c255797a6c7a8"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-arpes_8ipf.html#ac41f24572943dac2b40c255797a6c7a8">UnloadPearlArpesPackage</a> ()</td></tr>
<tr class="separator:ac41f24572943dac2b40c255797a6c7a8"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>data acquisition and analysis package for ARPES at PEARL. </p>
<p>this procedure defines the PEARL ARPES package the main purpose of this file is to load the necessary dependent procedures (see the include statements at the top)</p>
<dl class="section pre"><dt>Precondition</dt><dd><ul>
<li>HDF5 XOP must be loaded.</li>
<li>on-line data acquisition functionality requires the EPICS XOP to be loaded</li>
</ul>
</dd></dl>
<dl class="section author"><dt>Author</dt><dd>matthias muntwiler, <a href="#" onclick="location.href='mai'+'lto:'+'mat'+'th'+'ias'+'.m'+'unt'+'wi'+'ler'+'@p'+'si.'+'ch'; return false;">matth<span style="display: none;">.nosp@m.</span>ias.<span style="display: none;">.nosp@m.</span>muntw<span style="display: none;">.nosp@m.</span>iler<span style="display: none;">.nosp@m.</span>@psi.<span style="display: none;">.nosp@m.</span>ch</a></dd></dl>
<dl class="section copyright"><dt>Copyright</dt><dd>2012-18 Paul Scherrer Institut <br />
Licensed under the Apache License, Version 2.0 (the "License"); <br />
you may not use this file except in compliance with the License. <br />
You may obtain a copy of the License at <a href="http://www.apache.org/licenses/LICENSE-2.0">http://www.apache.org/licenses/LICENSE-2.0</a> </dd></dl>
<p>Definition in file <a class="el" href="pearl-arpes_8ipf_source.html">pearl-arpes.ipf</a>.</p>
</div><h2 class="groupheader">Function Documentation</h2>
<a class="anchor" id="a8e4eacc6efacf2c65615c1ea72d722ed"></a>
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<td class="memname">static variable AfterCompiledHook </td>
<td>(</td>
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p>initializes package data once when the procedure is first loaded </p>
<p>Definition at line <a class="el" href="pearl-arpes_8ipf_source.html#l00083">83</a> of file <a class="el" href="pearl-arpes_8ipf_source.html">pearl-arpes.ipf</a>.</p>
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<td class="memname">variable UnloadPearlArpesPackage </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
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<p>Definition at line <a class="el" href="pearl-arpes_8ipf_source.html#l00090">90</a> of file <a class="el" href="pearl-arpes_8ipf_source.html">pearl-arpes.ipf</a>.</p>
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<div class="title">pearl-fitfuncs.ipf File Reference<div class="ingroups"><a class="el" href="group___arpes_package.html">ARPES package</a></div></div> </div>
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<p>various fit functions for photoelectron spectroscopy.
<a href="#details">More...</a></p>
<div class="textblock"><code>#include &quot;mm-physconst&quot;</code><br />
</div>
<p><a href="pearl-fitfuncs_8ipf_source.html">Go to the source code of this file.</a></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="nested-classes"></a>
Data Structures</h2></td></tr>
<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="struct_doniach_sunjic_struct.html">DoniachSunjicStruct</a></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="namespaces"></a>
Namespaces</h2></td></tr>
<tr class="memitem:namespace_pearl_fit_funcs"><td class="memItemLeft" align="right" valign="top"> &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespace_pearl_fit_funcs.html">PearlFitFuncs</a></td></tr>
<tr class="memdesc:namespace_pearl_fit_funcs"><td class="mdescLeft">&#160;</td><td class="mdescRight">various fit functions for photoelectron spectroscopy. <br /></td></tr>
<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
Functions</h2></td></tr>
<tr class="memitem:aad1418e71830c1ec71d7dd62b2ecf9ba"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#aad1418e71830c1ec71d7dd62b2ecf9ba">MultiGaussLinBG</a> (wave w, variable x)</td></tr>
<tr class="memdesc:aad1418e71830c1ec71d7dd62b2ecf9ba"><td class="mdescLeft">&#160;</td><td class="mdescRight">multiple gaussian peaks on a linear background fit function. <a href="#aad1418e71830c1ec71d7dd62b2ecf9ba">More...</a><br /></td></tr>
<tr class="separator:aad1418e71830c1ec71d7dd62b2ecf9ba"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a2c6547164c0b46efecf4d372ea04c263"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a2c6547164c0b46efecf4d372ea04c263">MultiGaussLinBG_AO</a> (wave pw, wave yw, wave xw)</td></tr>
<tr class="memdesc:a2c6547164c0b46efecf4d372ea04c263"><td class="mdescLeft">&#160;</td><td class="mdescRight">multiple gaussian peaks on a linear background fit function (all at once). <a href="#a2c6547164c0b46efecf4d372ea04c263">More...</a><br /></td></tr>
<tr class="separator:a2c6547164c0b46efecf4d372ea04c263"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a3a94468da285a31eed5e990cd90e5cdf"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a3a94468da285a31eed5e990cd90e5cdf">MultiVoigtLinBG</a> (wave w, variable x)</td></tr>
<tr class="memdesc:a3a94468da285a31eed5e990cd90e5cdf"><td class="mdescLeft">&#160;</td><td class="mdescRight">multiple voigt peaks on a linear background fit function. <a href="#a3a94468da285a31eed5e990cd90e5cdf">More...</a><br /></td></tr>
<tr class="separator:a3a94468da285a31eed5e990cd90e5cdf"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aaa48428994f8720a12e7237ef43e86ea"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#aaa48428994f8720a12e7237ef43e86ea">DoniachSunjic</a> (variable x, variable amp, variable pos, variable sing, variable fwhm)</td></tr>
<tr class="memdesc:aaa48428994f8720a12e7237ef43e86ea"><td class="mdescLeft">&#160;</td><td class="mdescRight">Doniach-Sunjic line shape. <a href="#aaa48428994f8720a12e7237ef43e86ea">More...</a><br /></td></tr>
<tr class="separator:aaa48428994f8720a12e7237ef43e86ea"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a1520bd078ef77fd16ba20e95dbc6829d"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a1520bd078ef77fd16ba20e95dbc6829d">MultiDoniachSunjicLinBG</a> (wave w, variable x)</td></tr>
<tr class="memdesc:a1520bd078ef77fd16ba20e95dbc6829d"><td class="mdescLeft">&#160;</td><td class="mdescRight">multiple doniach-sunjic peaks on a linear background fit function. <a href="#a1520bd078ef77fd16ba20e95dbc6829d">More...</a><br /></td></tr>
<tr class="separator:a1520bd078ef77fd16ba20e95dbc6829d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:af62cb65b7444ff60e956a45bd5d0ec27"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#af62cb65b7444ff60e956a45bd5d0ec27">ds1_bg</a> (wave w, variable x)</td></tr>
<tr class="separator:af62cb65b7444ff60e956a45bd5d0ec27"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a1e729418252bf0d05ea6ec5cbd65b834"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a1e729418252bf0d05ea6ec5cbd65b834">ds2_bg</a> (wave w, variable x)</td></tr>
<tr class="separator:a1e729418252bf0d05ea6ec5cbd65b834"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ab32134566b2573672ac674565deebd36"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#ab32134566b2573672ac674565deebd36">ds4_bg</a> (wave w, variable x)</td></tr>
<tr class="separator:ab32134566b2573672ac674565deebd36"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a5a2a03026b88f3dd99214ab1b26e6f80"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a5a2a03026b88f3dd99214ab1b26e6f80">ds6_bg</a> (wave w, variable x)</td></tr>
<tr class="separator:a5a2a03026b88f3dd99214ab1b26e6f80"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a9d110819fa3cd2173f3103724e394fdf"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a9d110819fa3cd2173f3103724e394fdf">DoniachSunjicBroadS</a> (<a class="el" href="struct_doniach_sunjic_struct.html">DoniachSunjicStruct</a> *s)</td></tr>
<tr class="separator:a9d110819fa3cd2173f3103724e394fdf"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ae2d138beb7cb39e8042487893095b461"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#ae2d138beb7cb39e8042487893095b461">DoniachSunjicBroad</a> (wave pw, wave yw, wave xw)</td></tr>
<tr class="separator:ae2d138beb7cb39e8042487893095b461"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aff8e8b103c32c8e723b57ce7ad5ef0f5"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#aff8e8b103c32c8e723b57ce7ad5ef0f5">Calc_DoniachSunjicBroad</a> (wave pw, wave yw)</td></tr>
<tr class="separator:aff8e8b103c32c8e723b57ce7ad5ef0f5"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a819902ab9f541b75a0fd33a7b52465d0"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a819902ab9f541b75a0fd33a7b52465d0">Fit_DoniachSunjicBroad</a> (wave pw, wave yw, wave xw, wave ww)</td></tr>
<tr class="separator:a819902ab9f541b75a0fd33a7b52465d0"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a13a5ee22049d9a3379cd6e55654e70a3"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a13a5ee22049d9a3379cd6e55654e70a3">Au4f</a> (wave w, variable x)</td></tr>
<tr class="separator:a13a5ee22049d9a3379cd6e55654e70a3"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a24cd6a0c96ef8c720e371bb31ac0a479"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a24cd6a0c96ef8c720e371bb31ac0a479">Au4f_2p2</a> (wave w, variable x)</td></tr>
<tr class="separator:a24cd6a0c96ef8c720e371bb31ac0a479"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a84a0278284332631682ce032018d1716"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a84a0278284332631682ce032018d1716">ShowComponents_Au4f_2p2</a> (wave coef_wave, wave fit_wave)</td></tr>
<tr class="separator:a84a0278284332631682ce032018d1716"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a709f7c4585b1d850ea8aae1885ac18cb"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a709f7c4585b1d850ea8aae1885ac18cb">Au4f_2p3</a> (wave w, variable x)</td></tr>
<tr class="separator:a709f7c4585b1d850ea8aae1885ac18cb"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a02368cc4adfbd746cd2f1e7d73884a61"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a02368cc4adfbd746cd2f1e7d73884a61">ShowComponents_Au4f_2p3</a> (wave coef_wave, wave fit_wave)</td></tr>
<tr class="separator:a02368cc4adfbd746cd2f1e7d73884a61"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a4d20215153c0e0cee3870dfceded8bc9"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-fitfuncs_8ipf.html#a4d20215153c0e0cee3870dfceded8bc9">FermiGaussConv</a> (wave pw, wave yw, wave xw)</td></tr>
<tr class="memdesc:a4d20215153c0e0cee3870dfceded8bc9"><td class="mdescLeft">&#160;</td><td class="mdescRight">convolution of Fermi-Dirac distribution and a Gaussian. <a href="#a4d20215153c0e0cee3870dfceded8bc9">More...</a><br /></td></tr>
<tr class="separator:a4d20215153c0e0cee3870dfceded8bc9"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>various fit functions for photoelectron spectroscopy. </p>
<p>this procedure contains various functions for curve fitting.</p>
<dl class="section author"><dt>Author</dt><dd>matthias muntwiler, <a href="#" onclick="location.href='mai'+'lto:'+'mat'+'th'+'ias'+'.m'+'unt'+'wi'+'ler'+'@p'+'si.'+'ch'; return false;">matth<span style="display: none;">.nosp@m.</span>ias.<span style="display: none;">.nosp@m.</span>muntw<span style="display: none;">.nosp@m.</span>iler<span style="display: none;">.nosp@m.</span>@psi.<span style="display: none;">.nosp@m.</span>ch</a></dd></dl>
<dl class="section copyright"><dt>Copyright</dt><dd>2013-18 Paul Scherrer Institut <br />
Licensed under the Apache License, Version 2.0 (the "License"); <br />
you may not use this file except in compliance with the License. <br />
You may obtain a copy of the License at <a href="http://www.apache.org/licenses/LICENSE-2.0">http://www.apache.org/licenses/LICENSE-2.0</a> </dd></dl>
<p>Definition in file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div><h2 class="groupheader">Function Documentation</h2>
<a class="anchor" id="a13a5ee22049d9a3379cd6e55654e70a3"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable Au4f </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00564">564</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a24cd6a0c96ef8c720e371bb31ac0a479"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable Au4f_2p2 </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00609">609</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a709f7c4585b1d850ea8aae1885ac18cb"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable Au4f_2p3 </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00694">694</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="aff8e8b103c32c8e723b57ce7ad5ef0f5"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable Calc_DoniachSunjicBroad </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>pw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>yw</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00507">507</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="aaa48428994f8720a12e7237ef43e86ea"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">threadsafe variable DoniachSunjic </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>amp</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>pos</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>sing</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>fwhm</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Doniach-Sunjic line shape. </p>
<p>[S. Doniach, M. Sunjic, J. Phys. C 3 (1970) 285]</p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">x</td><td>independent variable </td></tr>
<tr><td class="paramname">amp</td><td>amplitude </td></tr>
<tr><td class="paramname">pos</td><td>position </td></tr>
<tr><td class="paramname">sing</td><td>singularity index (0 &lt;= sing &lt; 1) </td></tr>
<tr><td class="paramname">fwhm</td><td>full width at half maximum </td></tr>
</table>
</dd>
</dl>
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00140">140</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
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<a class="anchor" id="ae2d138beb7cb39e8042487893095b461"></a>
<div class="memitem">
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<td class="memname">variable DoniachSunjicBroad </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>pw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>yw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>xw</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00446">446</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a9d110819fa3cd2173f3103724e394fdf"></a>
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<div class="memproto">
<table class="memname">
<tr>
<td class="memname">threadsafe variable DoniachSunjicBroadS </td>
<td>(</td>
<td class="paramtype"><a class="el" href="struct_doniach_sunjic_struct.html">DoniachSunjicStruct</a> *&#160;</td>
<td class="paramname"><em>s</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00357">357</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="af62cb65b7444ff60e956a45bd5d0ec27"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">threadsafe variable ds1_bg </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00183">183</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
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<a class="anchor" id="a1e729418252bf0d05ea6ec5cbd65b834"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
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<td class="memname">threadsafe variable ds2_bg </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00206">206</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="ab32134566b2573672ac674565deebd36"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable ds4_bg </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00234">234</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a5a2a03026b88f3dd99214ab1b26e6f80"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable ds6_bg </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00275">275</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a4d20215153c0e0cee3870dfceded8bc9"></a>
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<td class="memname">variable FermiGaussConv </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>pw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>yw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>xw</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>convolution of Fermi-Dirac distribution and a Gaussian. </p>
<ul>
<li>pw[0] = constant background </li>
<li>pw[1] = linear background </li>
<li>pw[2] = amplitude </li>
<li>pw[3] = Fermi level in eV </li>
<li>pw[4] = temperature in K </li>
<li>pw[5] = gaussian width = FWHM / 1.66511 </li>
</ul>
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00817">817</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a819902ab9f541b75a0fd33a7b52465d0"></a>
<div class="memitem">
<div class="memproto">
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<tr>
<td class="memname">variable Fit_DoniachSunjicBroad </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>pw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>yw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>xw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>ww</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00528">528</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a1520bd078ef77fd16ba20e95dbc6829d"></a>
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<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable MultiDoniachSunjicLinBG </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>multiple doniach-sunjic peaks on a linear background fit function. </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">w</td><td>shape parameters. the length of the wave defines the number of peaks. <ul>
<li>w[0] = constant coefficient of background </li>
<li>w[1] = linear coefficient of background </li>
<li>w[2 + (i-1) * 4] = amplitude of peak i </li>
<li>w[3 + (i-1) * 4] = position of peak i </li>
<li>w[4 + (i-1) * 4] = width (fwhm) of peak i </li>
<li>w[5 + (i-1) * 4] = singularity index (0...1) of peak i </li>
</ul>
</td></tr>
<tr><td class="paramname">x</td><td>independent variable </td></tr>
</table>
</dd>
</dl>
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00167">167</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="aad1418e71830c1ec71d7dd62b2ecf9ba"></a>
<div class="memitem">
<div class="memproto">
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<tr>
<td class="memname">threadsafe variable MultiGaussLinBG </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>multiple gaussian peaks on a linear background fit function. </p>
<dl class="section note"><dt>Note</dt><dd>FWHM = width * 2 * sqrt(ln(2)) = width * 1.665</dd></dl>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">w</td><td>shape parameters. the length of the wave defines the number of peaks. <ul>
<li>w[0] = constant coefficient of background </li>
<li>w[1] = linear coefficient of background </li>
<li>w[2 + (i-1) * 3] = amplitude of peak i </li>
<li>w[3 + (i-1) * 3] = position of peak i </li>
<li>w[4 + (i-1) * 3] = width of peak i (see note) </li>
</ul>
</td></tr>
<tr><td class="paramname">x</td><td>independent variable </td></tr>
</table>
</dd>
</dl>
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00044">44</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
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<a class="anchor" id="a2c6547164c0b46efecf4d372ea04c263"></a>
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<div class="memproto">
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<tr>
<td class="memname">threadsafe variable MultiGaussLinBG_AO </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>pw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>yw</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>xw</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>multiple gaussian peaks on a linear background fit function (all at once). </p>
<p>this is the all-at-once version of <a class="el" href="pearl-fitfuncs_8ipf.html#aad1418e71830c1ec71d7dd62b2ecf9ba">MultiGaussLinBG</a>. it runs about 15% faster compared to the point-by-point function (measured on a 200 point spectrum with 3 peaks).</p>
<dl class="section note"><dt>Note</dt><dd>FWHM = width * 2 * sqrt(ln(2)) = width * 1.665</dd></dl>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">pw</td><td>shape parameters. the length of the wave defines the number of peaks. <ul>
<li>pw[0] = constant coefficient of background </li>
<li>pw[1] = linear coefficient of background </li>
<li>pw[2 + (i-1) * 3] = amplitude of peak i </li>
<li>pw[3 + (i-1) * 3] = position of peak i </li>
<li>pw[4 + (i-1) * 3] = width of peak i (see note)</li>
</ul>
</td></tr>
<tr><td class="paramname">yw</td><td>y (dependent) values.</td></tr>
<tr><td class="paramname">xw</td><td>x (independent) independent values. </td></tr>
</table>
</dd>
</dl>
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00079">79</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
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<a class="anchor" id="a3a94468da285a31eed5e990cd90e5cdf"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable MultiVoigtLinBG </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>x</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>multiple voigt peaks on a linear background fit function. </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">w</td><td>shape parameters. the length of the wave defines the number of peaks. <ul>
<li>w[0] = constant coefficient of background </li>
<li>w[1] = linear coefficient of background </li>
<li>w[2 + (i-1) * 4] = amplitude of peak i </li>
<li>w[3 + (i-1) * 4] = position of peak i </li>
<li>w[4 + (i-1) * 4] = width of peak i </li>
<li>w[5 + (i-1) * 4] = shape of peak i </li>
</ul>
</td></tr>
<tr><td class="paramname">x</td><td>independent variable </td></tr>
</table>
</dd>
</dl>
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00110">110</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
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<a class="anchor" id="a84a0278284332631682ce032018d1716"></a>
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<table class="memname">
<tr>
<td class="memname">variable ShowComponents_Au4f_2p2 </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>coef_wave</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>fit_wave</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00663">663</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
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</div>
<a class="anchor" id="a02368cc4adfbd746cd2f1e7d73884a61"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable ShowComponents_Au4f_2p3 </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>coef_wave</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>fit_wave</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-fitfuncs_8ipf_source.html#l00762">762</a> of file <a class="el" href="pearl-fitfuncs_8ipf_source.html">pearl-fitfuncs.ipf</a>.</p>
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Functions</h2></td></tr>
<tr class="memitem:aaf29d090c81e00cf44af295193b24c5a"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-gui-tools_8ipf.html#aaf29d090c81e00cf44af295193b24c5a">display_progress_panel</a> (string title, string message, variable progress_max)</td></tr>
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<h2 class="groupheader">Function Documentation</h2>
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<td class="memname">variable display_progress_panel </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>title</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
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<td class="paramtype">string&#160;</td>
<td class="paramname"><em>message</em>, </td>
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<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
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<tr>
<td></td>
<td>)</td>
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</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-gui-tools_8ipf_source.html#l00018">18</a> of file <a class="el" href="pearl-gui-tools_8ipf_source.html">pearl-gui-tools.ipf</a>.</p>
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<td class="memname">variable kill_progress_panel </td>
<td>(</td>
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<td></td>
</tr>
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<p>Definition at line <a class="el" href="pearl-gui-tools_8ipf_source.html#l00050">50</a> of file <a class="el" href="pearl-gui-tools_8ipf_source.html">pearl-gui-tools.ipf</a>.</p>
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<td class="memname">variable update_progress_panel </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>progress</em>, </td>
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<tr>
<td class="paramkey"></td>
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<td class="paramtype">string&#160;</td>
<td class="paramname"><em>message</em> = <code>defaultValue</code>, </td>
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<td></td>
<td>)</td>
<td></td><td></td>
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<p>Definition at line <a class="el" href="pearl-gui-tools_8ipf_source.html#l00032">32</a> of file <a class="el" href="pearl-gui-tools_8ipf_source.html">pearl-gui-tools.ipf</a>.</p>
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&#160;<span id="projectnumber">rev-distro-2.0.2-0-g3235d52</span>
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<p><a href="pearl-menu_8ipf_source.html">Go to the source code of this file.</a></p>
<table class="memberdecls">
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Functions</h2></td></tr>
<tr class="memitem:a3404a53bf13a01c1e811d1af6c35b726"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-menu_8ipf.html#a3404a53bf13a01c1e811d1af6c35b726">PearlMenuEnableFunc</a> (string funcname)</td></tr>
<tr class="separator:a3404a53bf13a01c1e811d1af6c35b726"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:af6c9740540c6242eb7bf57fc49de82ab"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-menu_8ipf.html#af6c9740540c6242eb7bf57fc49de82ab">LoadPearlOptics</a> ()</td></tr>
<tr class="separator:af6c9740540c6242eb7bf57fc49de82ab"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aa70ef420d6fe0f6a433cd2371fc4a03d"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-menu_8ipf.html#aa70ef420d6fe0f6a433cd2371fc4a03d">LoadPearlArpes</a> ()</td></tr>
<tr class="separator:aa70ef420d6fe0f6a433cd2371fc4a03d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a3658ae687e12987fa1d70636849a060f"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-menu_8ipf.html#a3658ae687e12987fa1d70636849a060f">LoadPearlPreparation</a> ()</td></tr>
<tr class="separator:a3658ae687e12987fa1d70636849a060f"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aad7d768680c6d8a9b8a7025c7e1ec75d"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-menu_8ipf.html#aad7d768680c6d8a9b8a7025c7e1ec75d">Display2dProfiles</a> ()</td></tr>
<tr class="separator:aad7d768680c6d8a9b8a7025c7e1ec75d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ac73a94f760455f19294a9f917b43f145"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-menu_8ipf.html#ac73a94f760455f19294a9f917b43f145">Display3dSlicer</a> ()</td></tr>
<tr class="separator:ac73a94f760455f19294a9f917b43f145"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aab34952c2f3b36f9ee8619eb901ff581"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-menu_8ipf.html#aab34952c2f3b36f9ee8619eb901ff581">DisplayGizmoSlicer</a> ()</td></tr>
<tr class="separator:aab34952c2f3b36f9ee8619eb901ff581"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a61ded60be72959b00f22842afa37c56f"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-menu_8ipf.html#a61ded60be72959b00f22842afa37c56f">PearlLiveDisplay</a> (string epicsname, string nickname, string wbRGB)</td></tr>
<tr class="separator:a61ded60be72959b00f22842afa37c56f"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a74bc5da7843ee6c25f2d9c93d22a6ffa"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-menu_8ipf.html#a74bc5da7843ee6c25f2d9c93d22a6ffa">PearlAnglescanTracker</a> (string epicsname, string wbRGB)</td></tr>
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<h2 class="groupheader">Function Documentation</h2>
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<td class="memname">variable Display2dProfiles </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
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<p>Definition at line <a class="el" href="pearl-menu_8ipf_source.html#l00113">113</a> of file <a class="el" href="pearl-menu_8ipf_source.html">pearl-menu.ipf</a>.</p>
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<td class="memname">variable Display3dSlicer </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
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<p>Definition at line <a class="el" href="pearl-menu_8ipf_source.html#l00130">130</a> of file <a class="el" href="pearl-menu_8ipf_source.html">pearl-menu.ipf</a>.</p>
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<td class="memname">variable DisplayGizmoSlicer </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
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<p>Definition at line <a class="el" href="pearl-menu_8ipf_source.html#l00149">149</a> of file <a class="el" href="pearl-menu_8ipf_source.html">pearl-menu.ipf</a>.</p>
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<td class="memname">variable LoadPearlArpes </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
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</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-menu_8ipf_source.html#l00101">101</a> of file <a class="el" href="pearl-menu_8ipf_source.html">pearl-menu.ipf</a>.</p>
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<div class="memitem">
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<td class="memname">variable LoadPearlOptics </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-menu_8ipf_source.html#l00094">94</a> of file <a class="el" href="pearl-menu_8ipf_source.html">pearl-menu.ipf</a>.</p>
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<td class="memname">variable LoadPearlPreparation </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
<td></td>
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</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-menu_8ipf_source.html#l00107">107</a> of file <a class="el" href="pearl-menu_8ipf_source.html">pearl-menu.ipf</a>.</p>
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<a class="anchor" id="a74bc5da7843ee6c25f2d9c93d22a6ffa"></a>
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<td class="memname">variable PearlAnglescanTracker </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>epicsname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>wbRGB</em>&#160;</td>
</tr>
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<td></td>
<td>)</td>
<td></td><td></td>
</tr>
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</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-menu_8ipf_source.html#l00187">187</a> of file <a class="el" href="pearl-menu_8ipf_source.html">pearl-menu.ipf</a>.</p>
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<div class="memitem">
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<table class="memname">
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<td class="memname">variable PearlLiveDisplay </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>epicsname</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>nickname</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>wbRGB</em>&#160;</td>
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<tr>
<td></td>
<td>)</td>
<td></td><td></td>
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</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-menu_8ipf_source.html#l00168">168</a> of file <a class="el" href="pearl-menu_8ipf_source.html">pearl-menu.ipf</a>.</p>
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<td class="memname">string PearlMenuEnableFunc </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>funcname</em></td><td>)</td>
<td></td>
</tr>
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<p>Definition at line <a class="el" href="pearl-menu_8ipf_source.html#l00082">82</a> of file <a class="el" href="pearl-menu_8ipf_source.html">pearl-menu.ipf</a>.</p>
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<li class="footer">Generated on Tue Mar 13 2018 12:43:01 for PEARL Procedures by
<li class="footer">Generated on Sun Feb 10 2019 14:39:17 for PEARL Procedures by
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<img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.11 </li>
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<div id="projectname">PEARL Procedures
&#160;<span id="projectnumber">rev-distro-2.0.0-0-gfda49c3-dirty</span>
&#160;<span id="projectnumber">rev-distro-2.0.2-0-g3235d52</span>
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<div id="projectbrief">Igor procedures for the analysis of PEARL data</div>
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Functions</h2></td></tr>
<tr class="memitem:a603b71176ed838713ec555c440082e22"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-otf-import_8ipf.html#a603b71176ed838713ec555c440082e22">otf_load_itx_all</a> (string pathname)</td></tr>
<tr class="separator:a603b71176ed838713ec555c440082e22"><td class="memSeparator" colspan="2">&#160;</td></tr>
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<tr class="separator:aa47fc4b956ee84a993b6d285b628fe20"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a3632f8a5c0ee32a14a3e589b74a0c496"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-otf-import_8ipf.html#a3632f8a5c0ee32a14a3e589b74a0c496">otf_load_itx</a> (string pathname, string filename)</td></tr>
<tr class="separator:a3632f8a5c0ee32a14a3e589b74a0c496"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a44078e1d8f26e515539acb96973fc630"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-otf-import_8ipf.html#a44078e1d8f26e515539acb96973fc630">otf_gather_iterator</a> (dfref df, string *sdata)</td></tr>
<tr class="separator:a44078e1d8f26e515539acb96973fc630"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ad2a83b85030a7d7769d434d6e2e9e557"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-otf-import_8ipf.html#ad2a83b85030a7d7769d434d6e2e9e557">otf_gather_batch</a> (string ywavematch, string xwavematch, string destfolder)</td></tr>
<tr class="separator:ad2a83b85030a7d7769d434d6e2e9e557"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ae2640256d7d07c11b41621430279cef6"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-otf-import_8ipf.html#ae2640256d7d07c11b41621430279cef6">gather_batch</a> (string foldermatch, string ywavematch, string xwavematch, string destfolder)</td></tr>
<tr class="separator:ae2640256d7d07c11b41621430279cef6"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a882da254075e8d89f0117e491af90df0"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-otf-import_8ipf.html#a882da254075e8d89f0117e491af90df0">otf_rename_folders_iterator</a> (dfref df, string *sdata)</td></tr>
<tr class="separator:a882da254075e8d89f0117e491af90df0"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a715f9cf2d2b1ffb04f2f9a0e344a80ee"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-otf-import_8ipf.html#a715f9cf2d2b1ffb04f2f9a0e344a80ee">otf_rename_folders</a> (string pattern, variable unique_index=defaultValue, string new_suffix=defaultValue, string match_str=defaultValue)</td></tr>
<tr class="separator:a715f9cf2d2b1ffb04f2f9a0e344a80ee"><td class="memSeparator" colspan="2">&#160;</td></tr>
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<h2 class="groupheader">Function Documentation</h2>
<a class="anchor" id="ae2640256d7d07c11b41621430279cef6"></a>
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<div class="memproto">
<table class="memname">
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<td class="memname">variable gather_batch </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>foldermatch</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>ywavematch</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>xwavematch</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>destfolder</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00162">162</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="ad2a83b85030a7d7769d434d6e2e9e557"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable otf_gather_batch </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>ywavematch</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>xwavematch</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>destfolder</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00152">152</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a44078e1d8f26e515539acb96973fc630"></a>
<div class="memitem">
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<tr>
<td class="memname">variable otf_gather_iterator </td>
<td>(</td>
<td class="paramtype">dfref&#160;</td>
<td class="paramname"><em>df</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>sdata</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00106">106</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="abd8897317366046dfb97c6ca53813d18"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable otf_interp </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>e1</em>, </td>
</tr>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>e2</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>npts</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>smo</em>&#160;</td>
</tr>
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<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00271">271</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a3632f8a5c0ee32a14a3e589b74a0c496"></a>
<div class="memitem">
<div class="memproto">
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<tr>
<td class="memname">variable otf_load_itx </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>pathname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>filename</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00076">76</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
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<a class="anchor" id="a603b71176ed838713ec555c440082e22"></a>
<div class="memitem">
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<td class="memname">variable otf_load_itx_all </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>pathname</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00031">31</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
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<a class="anchor" id="aa47fc4b956ee84a993b6d285b628fe20"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable otf_load_itx_match </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>pathname</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>matchstr</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00053">53</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
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</div>
<a class="anchor" id="a715f9cf2d2b1ffb04f2f9a0e344a80ee"></a>
<div class="memitem">
<div class="memproto">
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<td class="memname">variable otf_rename_folders </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>pattern</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>unique_index</em> = <code>defaultValue</code>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>new_suffix</em> = <code>defaultValue</code>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>match_str</em> = <code>defaultValue</code>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00231">231</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
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<a class="anchor" id="a882da254075e8d89f0117e491af90df0"></a>
<div class="memitem">
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<table class="memname">
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<td class="memname">variable otf_rename_folders_iterator </td>
<td>(</td>
<td class="paramtype">dfref&#160;</td>
<td class="paramname"><em>df</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>sdata</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00185">185</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
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<a class="anchor" id="aba965b854836658aa00e3ec2b361d7c9"></a>
<div class="memitem">
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<tr>
<td class="memname">variable otf_smo_int </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>win</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>wout</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>wpe</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>smo</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-otf-import_8ipf_source.html#l00304">304</a> of file <a class="el" href="pearl-otf-import_8ipf_source.html">pearl-otf-import.ipf</a>.</p>
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Functions</h2></td></tr>
<tr class="memitem:aca0a5aaa4854d83ef667c53007312fb8"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-polar-coordinates_8ipf.html#aca0a5aaa4854d83ef667c53007312fb8">cart2polar</a> (variable xx, variable yy, variable zz, variable *radius, variable *theta, variable *phi)</td></tr>
<tr class="separator:aca0a5aaa4854d83ef667c53007312fb8"><td class="memSeparator" colspan="2">&#160;</td></tr>
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<tr class="separator:adfc1f0b3cddf672b0ccdb6a22b97ba9e"><td class="memSeparator" colspan="2">&#160;</td></tr>
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<tr class="separator:a94ccfa9cf52c55eb1f66c2704478c396"><td class="memSeparator" colspan="2">&#160;</td></tr>
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<tr class="separator:a58139e6ebfba242b6b2ba3533b865a9a"><td class="memSeparator" colspan="2">&#160;</td></tr>
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<h2 class="groupheader">Function Documentation</h2>
<a class="anchor" id="aca0a5aaa4854d83ef667c53007312fb8"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable cart2polar </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>xx</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>yy</em>, </td>
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<td class="paramkey"></td>
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<td class="paramname"><em>zz</em>, </td>
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<td class="paramname"><em>radius</em>, </td>
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<td class="paramkey"></td>
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<td class="paramtype">variable *&#160;</td>
<td class="paramname"><em>theta</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable *&#160;</td>
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<td></td>
<td>)</td>
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<p>Definition at line <a class="el" href="pearl-polar-coordinates_8ipf_source.html#l00010">10</a> of file <a class="el" href="pearl-polar-coordinates_8ipf_source.html">pearl-polar-coordinates.ipf</a>.</p>
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<a class="anchor" id="adfc1f0b3cddf672b0ccdb6a22b97ba9e"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable cart2polar_wave </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>in</em>, </td>
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<tr>
<td class="paramkey"></td>
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<td class="paramtype">wave&#160;</td>
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<td></td>
<td>)</td>
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</tr>
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</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-polar-coordinates_8ipf_source.html#l00036">36</a> of file <a class="el" href="pearl-polar-coordinates_8ipf_source.html">pearl-polar-coordinates.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a94ccfa9cf52c55eb1f66c2704478c396"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable polar2cart </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>radius</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>theta</em>, </td>
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<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>phi</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable *&#160;</td>
<td class="paramname"><em>xx</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable *&#160;</td>
<td class="paramname"><em>yy</em>, </td>
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<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable *&#160;</td>
<td class="paramname"><em>zz</em>&#160;</td>
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<td></td>
<td>)</td>
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</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-polar-coordinates_8ipf_source.html#l00048">48</a> of file <a class="el" href="pearl-polar-coordinates_8ipf_source.html">pearl-polar-coordinates.ipf</a>.</p>
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</div>
<a class="anchor" id="a6a0ffb6b9160413d9694b1fd8e10c858"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable polar2cart_wave </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>in</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>out</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-polar-coordinates_8ipf_source.html#l00058">58</a> of file <a class="el" href="pearl-polar-coordinates_8ipf_source.html">pearl-polar-coordinates.ipf</a>.</p>
</div>
</div>
<a class="anchor" id="a58139e6ebfba242b6b2ba3533b865a9a"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable polar_distance </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>polar1</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
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<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>polar2</em>, </td>
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<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>azim2</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-polar-coordinates_8ipf_source.html#l00069">69</a> of file <a class="el" href="pearl-polar-coordinates_8ipf_source.html">pearl-polar-coordinates.ipf</a>.</p>
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<div class="title">pearl-scienta-preprocess.ipf File Reference<div class="ingroups"><a class="el" href="group___arpes_package.html">ARPES package</a></div></div> </div>
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<p>preprocessing functions for Scienta detector images.
<a href="#details">More...</a></p>
<div class="textblock"><code>#include &quot;pearl-fitfuncs&quot;</code><br />
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<p><a href="pearl-scienta-preprocess_8ipf_source.html">Go to the source code of this file.</a></p>
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<tr class="memdesc:namespace_pearl_scienta_preprocess"><td class="mdescLeft">&#160;</td><td class="mdescRight">preprocessing functions for Scienta detector images. <br /></td></tr>
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Functions</h2></td></tr>
<tr class="memitem:a145c7275b8809c5e789b932ef46e4811"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#a145c7275b8809c5e789b932ef46e4811">prompt_int_linbg_reduction</a> (string *param)</td></tr>
<tr class="memdesc:a145c7275b8809c5e789b932ef46e4811"><td class="mdescLeft">&#160;</td><td class="mdescRight">prompt the user for integrate on linear background reduction parameters. <a href="#a145c7275b8809c5e789b932ef46e4811">More...</a><br /></td></tr>
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<tr class="memitem:ae6877c51ad15c2ba8a69c65356cb34b8"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#ae6877c51ad15c2ba8a69c65356cb34b8">capture_int_linbg_cursors</a> ()</td></tr>
<tr class="memdesc:ae6877c51ad15c2ba8a69c65356cb34b8"><td class="mdescLeft">&#160;</td><td class="mdescRight">this function is for testing only, until we implement a proper interface <a href="#ae6877c51ad15c2ba8a69c65356cb34b8">More...</a><br /></td></tr>
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<tr class="memitem:a95fbd22f52f61d2bff0625b7b8e159d1"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#a95fbd22f52f61d2bff0625b7b8e159d1">csr_int_linbg_reduction</a> (string win)</td></tr>
<tr class="memdesc:a95fbd22f52f61d2bff0625b7b8e159d1"><td class="mdescLeft">&#160;</td><td class="mdescRight">set reduction parameters from cursors in a graph. <a href="#a95fbd22f52f61d2bff0625b7b8e159d1">More...</a><br /></td></tr>
<tr class="separator:a95fbd22f52f61d2bff0625b7b8e159d1"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a1e91197cd7a3581b70bc59a194d3f43b"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#a1e91197cd7a3581b70bc59a194d3f43b">int_linbg_reduction</a> (wave source, string *param)</td></tr>
<tr class="memdesc:a1e91197cd7a3581b70bc59a194d3f43b"><td class="mdescLeft">&#160;</td><td class="mdescRight">linear-background subtracted integration reduction function. <a href="#a1e91197cd7a3581b70bc59a194d3f43b">More...</a><br /></td></tr>
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<tr class="memitem:a6d06ea5a11ba79160efeea7fe673af8c"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#a6d06ea5a11ba79160efeea7fe673af8c">prompt_int_quadbg_reduction</a> (string *param)</td></tr>
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<tr class="memitem:ad626526589efec3f2f72ad001702fe39"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#ad626526589efec3f2f72ad001702fe39">int_quadbg_reduction</a> (wave source, string *param)</td></tr>
<tr class="memdesc:ad626526589efec3f2f72ad001702fe39"><td class="mdescLeft">&#160;</td><td class="mdescRight">integrate peak area minus a quadratic background <a href="#ad626526589efec3f2f72ad001702fe39">More...</a><br /></td></tr>
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<tr class="memitem:a6e7de6441bbcba217760448babaca827"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#a6e7de6441bbcba217760448babaca827">prompt_redim_linbg_reduction</a> (string *param)</td></tr>
<tr class="memdesc:a6e7de6441bbcba217760448babaca827"><td class="mdescLeft">&#160;</td><td class="mdescRight">parameter dialog for the <a class="el" href="pearl-scienta-preprocess_8ipf.html#a8e2aef3e0d5f2b304399a11423661fdc" title="linear background reduction function for incorrectly dimensioned scienta image ">redim_linbg_reduction()</a> function <a href="#a6e7de6441bbcba217760448babaca827">More...</a><br /></td></tr>
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<tr class="memitem:a8e2aef3e0d5f2b304399a11423661fdc"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#a8e2aef3e0d5f2b304399a11423661fdc">redim_linbg_reduction</a> (wave source, string *param)</td></tr>
<tr class="memdesc:a8e2aef3e0d5f2b304399a11423661fdc"><td class="mdescLeft">&#160;</td><td class="mdescRight">linear background reduction function for incorrectly dimensioned scienta image <a href="#a8e2aef3e0d5f2b304399a11423661fdc">More...</a><br /></td></tr>
<tr class="separator:a8e2aef3e0d5f2b304399a11423661fdc"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:adb78e8b2bbfd9c0faa5eb049b1dcad1c"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#adb78e8b2bbfd9c0faa5eb049b1dcad1c">test_gauss4_reduction</a> (wave image)</td></tr>
<tr class="memdesc:adb78e8b2bbfd9c0faa5eb049b1dcad1c"><td class="mdescLeft">&#160;</td><td class="mdescRight">apply the gauss4_reduction function to a single image <a href="#adb78e8b2bbfd9c0faa5eb049b1dcad1c">More...</a><br /></td></tr>
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<tr class="memitem:a1514250704b40aa2614d389a2e250d61"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#a1514250704b40aa2614d389a2e250d61">prompt_gauss4_reduction</a> (string *param)</td></tr>
<tr class="memdesc:a1514250704b40aa2614d389a2e250d61"><td class="mdescLeft">&#160;</td><td class="mdescRight">prompt for the gauss4_reduction parameters <a href="#a1514250704b40aa2614d389a2e250d61">More...</a><br /></td></tr>
<tr class="separator:a1514250704b40aa2614d389a2e250d61"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a83cdbd96c5b59011914d53118e5ef71c"><td class="memItemLeft" align="right" valign="top">threadsafe wave&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-scienta-preprocess_8ipf.html#a83cdbd96c5b59011914d53118e5ef71c">gauss4_reduction</a> (wave source, string *param)</td></tr>
<tr class="memdesc:a83cdbd96c5b59011914d53118e5ef71c"><td class="mdescLeft">&#160;</td><td class="mdescRight">fit horizontal cuts of an image with up to four gaussian peaks on a linear background <a href="#a83cdbd96c5b59011914d53118e5ef71c">More...</a><br /></td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>preprocessing functions for Scienta detector images. </p>
<p>this procedure contains functions for data reduction and instrument-specific normalization.</p>
<dl class="section author"><dt>Author</dt><dd>matthias muntwiler, <a href="#" onclick="location.href='mai'+'lto:'+'mat'+'th'+'ias'+'.m'+'unt'+'wi'+'ler'+'@p'+'si.'+'ch'; return false;">matth<span style="display: none;">.nosp@m.</span>ias.<span style="display: none;">.nosp@m.</span>muntw<span style="display: none;">.nosp@m.</span>iler<span style="display: none;">.nosp@m.</span>@psi.<span style="display: none;">.nosp@m.</span>ch</a></dd></dl>
<dl class="section copyright"><dt>Copyright</dt><dd>2013-18 Paul Scherrer Institut <br />
Licensed under the Apache License, Version 2.0 (the "License"); <br />
you may not use this file except in compliance with the License. <br />
You may obtain a copy of the License at <a href="http://www.apache.org/licenses/LICENSE-2.0">http://www.apache.org/licenses/LICENSE-2.0</a> </dd></dl>
<p>Definition in file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
</div><h2 class="groupheader">Function Documentation</h2>
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<p>this function is for testing only, until we implement a proper interface </p>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00067">67</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<td class="memname">string csr_int_linbg_reduction </td>
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<p>set reduction parameters from cursors in a graph. </p>
<p>PRELIMINARY - function arguments may change</p>
<p>sets reduction parameters from cursors in a graph. an even number of cursors (2 or more) must be set on the image. cursor names and order do not matter, except that the alphabetically first cursor which is attached to an image selects the image. the cursors mark the following positions, from innermost to outermost pair: 1) low and high limits of peak region. 2) peak-side boundary of lower and upper background region. 3) lower and upper cropping region. </p>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00089">89</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<td class="memname">threadsafe wave gauss4_reduction </td>
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<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>source</em>, </td>
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<td class="paramkey"></td>
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<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>param</em>&#160;</td>
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<p>fit horizontal cuts of an image with up to four gaussian peaks on a linear background </p>
<p>the function fits each horizontal profile (EDC) with four gaussian peaks on a linear background. the position and width of the peaks is kept fixed according to input parameters. the peak amplitude is constrained to positive value.</p>
<p>the width parameter is defined as in Igor's gauss curve fit function (standard deviation divided by the square root of two). the return value in dest1 is the integrated peak of one of the peaks. dest2 returns the corresponding error estimate.</p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">source</td><td>source wave. two-dimensional distribution of counts. for correct weighting and error estimation it is important that the source wave contains actual counts (Poisson statistics).</td></tr>
<tr><td class="paramname">param</td><td>(in, out) semicolon-separated key=value list of processing parameters. this is a pass-by-reference argument. the following parameters are required. position, width and limit parameters are on the x (energy) scale. <ul>
<li>rngl low limit of fit interval </li>
<li>rngh high limit of fit interval </li>
<li>pos1 position of peak 1 </li>
<li>wid1 width of peak 1 </li>
<li>pos2 position of peak 2 </li>
<li>wid2 width of peak 2 </li>
<li>pos3 position of peak 3 </li>
<li>wid3 width of peak 3 </li>
<li>pos4 position of peak 4 </li>
<li>wid4 width of peak 4 </li>
<li>npeaks number of peaks to fit: 1...4 the others are held at amplitude 0. </li>
<li>ybox box size of averaging in y direction, must be 1 or 3. other values lead to corrupt data.</li>
</ul>
</td></tr>
</table>
</dd>
</dl>
<dl class="section return"><dt>Returns</dt><dd>free wave containing references of the result waves. the number of waves is two times the number of peaks that are fit. the first npeaks waves contain the peak integrals, the second npeaks waves the corresponding error estimates. </dd></dl>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00672">672</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<td class="paramtype">string *&#160;</td>
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<p>linear-background subtracted integration reduction function. </p>
<p>data reduction function for adh5_load_reduced_detector. cf. <a class="el" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a> for an explanation of reduction functions.</p>
<p>this function calculates the average pixel value of each angular slice in one center and two background intervals. a background value is calculated at the center position by linear interpolation from the two background values. returns the center minus linear background in dest1. returns the Poisson one-sigma error in dest2.</p>
<p>typical values (peak centered on detector, FWHM ~ 20 % of image) Lcrop=0.11;Hcrop=0.11;Lsize=0.2;Hsize=0.2;Cpos=0.5;Csize=0.2</p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">source</td><td>scienta detector image, energy axis along X, angle axis along Y. two-dimensional intensity distribution (image). the scales are carried over to the result waves.</td></tr>
<tr><td class="paramname">param</td><td>parameters in a key1=value1;key2=value2;... list. all region parameters are relative to the image size (0...1). <ul>
<li>Lcrop = size of the lower cropping region </li>
<li>Hcrop = size of the upper cropping region </li>
<li>Lsize = size of the lower background integration region </li>
<li>Hsize = size of the upper background integration region </li>
<li>Cpos = center position of the of the peak integration region </li>
<li>Csize = size of the peak integration region</li>
</ul>
</td></tr>
</table>
</dd>
</dl>
<dl class="section return"><dt>Returns</dt><dd>free wave containing references of the two result waves. the first wave is the integral minus linear background. the second wave is the Poisson one-sigma error. </dd></dl>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00214">214</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<p>integrate peak area minus a quadratic background </p>
<p>data reduction function for adh5_load_reduced_detector. cf. <a class="el" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a> for an explanation of reduction functions.</p>
<p>this function calculates the average pixel value of each angular slice in one center and two background intervals. a background value is calculated at the center position by linear interpolation from the two background values. returns the center minus linear background in dest1. returns the Poisson one-sigma error in dest2.</p>
<p>typical values (peak centered on detector, FWHM ~ 20 % of image) Lcrop=0.11;Hcrop=0.11;Lsize=0.2;Hsize=0.2;Cpos=0.5;Csize=0.2</p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">source</td><td>scienta detector image, energy axis along X, angle axis along Y. two-dimensional intensity distribution (image). the scales are carried over to the result waves.</td></tr>
<tr><td class="paramname">param</td><td>parameters in a key1=value1;key2=value2;... list. all region parameters are relative to the image size (0...1). <ul>
<li>Lcrop = size of the lower cropping region </li>
<li>Hcrop = size of the upper cropping region </li>
<li>Lsize = size of the lower background integration region </li>
<li>Hsize = size of the upper background integration region </li>
<li>Cpos = center position of the of the peak integration region </li>
<li>Csize = size of the peak integration region</li>
</ul>
</td></tr>
</table>
</dd>
</dl>
<dl class="section return"><dt>Returns</dt><dd>free wave containing references of the two result waves. the first wave is the integral minus linear background. the second wave is the Poisson one-sigma error. </dd></dl>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00367">367</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<p>prompt for the gauss4_reduction parameters </p>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00580">580</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<p>prompt the user for integrate on linear background reduction parameters. </p>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00035">35</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<td class="memname">variable prompt_int_quadbg_reduction </td>
<td>(</td>
<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>param</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00305">305</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<td class="memname">variable prompt_redim_linbg_reduction </td>
<td>(</td>
<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>param</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>parameter dialog for the <a class="el" href="pearl-scienta-preprocess_8ipf.html#a8e2aef3e0d5f2b304399a11423661fdc" title="linear background reduction function for incorrectly dimensioned scienta image ">redim_linbg_reduction()</a> function </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">param</td><td>parameter string in a key1=value1;key2=value2;... list. the parameter string is passed by reference. see <a class="el" href="pearl-scienta-preprocess_8ipf.html#a8e2aef3e0d5f2b304399a11423661fdc" title="linear background reduction function for incorrectly dimensioned scienta image ">redim_linbg_reduction()</a> for a description of parameters.</td></tr>
</table>
</dd>
</dl>
<dl class="section return"><dt>Returns</dt><dd>zero if the user clicked OK, non-zero if the user clicked Cancel. </dd></dl>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00463">463</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
</div>
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<a class="anchor" id="a8e2aef3e0d5f2b304399a11423661fdc"></a>
<div class="memitem">
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<td class="memname">threadsafe wave redim_linbg_reduction </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>source</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>param</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>linear background reduction function for incorrectly dimensioned scienta image </p>
<p>if the energy step size does not divide the energy range to an integer number, the scienta image is exported with the wrong array size. this can be fixed by redimensioning the array.</p>
<p>the current implementation works in the case where dimension 0 needs to be incremented. the function may be generalized to dimension 1 and/or decrementing by additional parameters. it is not known yet whether a generalization is needed or whether it can cover all cases.</p>
<p>background subtraction and peak integration is the same as by the <a class="el" href="pearl-scienta-preprocess_8ipf.html#a1e91197cd7a3581b70bc59a194d3f43b" title="linear-background subtracted integration reduction function. ">int_linbg_reduction()</a> function.</p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">source</td><td>source wave Scienta detector image, energy axis along X, angle axis along Y</td></tr>
<tr><td class="paramname">param</td><td>parameter string in a key1=value1;key2=value2;... list. the parameter string is passed by reference.</td></tr>
</table>
</dd>
</dl>
<p>all region parameters are relative to the image size (0...1). </p><ul>
<li>Lcrop size of the lower cropping region </li>
<li>Hcrop size of the upper cropping region </li>
<li>Lsize size of the lower background integration region </li>
<li>Hsize size of the upper background integration region </li>
<li>Cpos center position of the of the peak integration region </li>
<li>Csize size of the peak integration region</li>
</ul>
<p>typical values (peak centered on detector, FWHM ~ 20 % of image) Lcrop=0.11;Hcrop=0.11;Lsize=0.2;Hsize=0.2;Cpos=0.5;Csize=0.2</p>
<dl class="section return"><dt>Returns</dt><dd>free wave containing references of the two result waves. the first wave is the integral minus linear background. the second wave is the Poisson one-sigma error. </dd></dl>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00526">526</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<td class="memname">variable test_gauss4_reduction </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>image</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p>apply the gauss4_reduction function to a single image </p>
<p>useful for testing or manual processing. to debug, (temporarily) remove the threadsafe attribute from the gauss2_reduction function. </p>
<p>Definition at line <a class="el" href="pearl-scienta-preprocess_8ipf_source.html#l00546">546</a> of file <a class="el" href="pearl-scienta-preprocess_8ipf_source.html">pearl-scienta-preprocess.ipf</a>.</p>
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<div id="projectname">PEARL Procedures
&#160;<span id="projectnumber">rev-distro-2.0.0-0-gfda49c3-dirty</span>
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<div class="textblock"><code>#include &quot;pearl-gui-tools&quot;</code><br />
</div>
<p><a href="pearl-tools_8ipf_source.html">Go to the source code of this file.</a></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
Functions</h2></td></tr>
<tr class="memitem:a6bdd1c0b269f1d7d99843ce0cb218cc7"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-tools_8ipf.html#a6bdd1c0b269f1d7d99843ce0cb218cc7">DefaultWaveIterator</a> (wave w, string *sdata)</td></tr>
<tr class="separator:a6bdd1c0b269f1d7d99843ce0cb218cc7"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a90c62bdfc186e2482ccb18113a591d5e"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-tools_8ipf.html#a90c62bdfc186e2482ccb18113a591d5e">AppendToGraphIterator</a> (wave w, string *sdata)</td></tr>
<tr class="separator:a90c62bdfc186e2482ccb18113a591d5e"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aea193a1b5fbdbb2a5dec9f25f3c05c45"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-tools_8ipf.html#aea193a1b5fbdbb2a5dec9f25f3c05c45">SumWavesIterator</a> (wave w, string *sdata)</td></tr>
<tr class="separator:aea193a1b5fbdbb2a5dec9f25f3c05c45"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aabc250f68dd85ca58d7be5077255af99"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-tools_8ipf.html#aabc250f68dd85ca58d7be5077255af99">IterateWaves</a> (string matchStr, funcref iterator, string sdata)</td></tr>
<tr class="separator:aabc250f68dd85ca58d7be5077255af99"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a3fb8c06030dc41a599380150807caeb0"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-tools_8ipf.html#a3fb8c06030dc41a599380150807caeb0">DefaultFolderIterator</a> (dfref df, string *sdata)</td></tr>
<tr class="separator:a3fb8c06030dc41a599380150807caeb0"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a7c5307e5e7c0202d2b088fdc11887069"><td class="memItemLeft" align="right" valign="top">string&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="pearl-tools_8ipf.html#a7c5307e5e7c0202d2b088fdc11887069">IterateDataFolders</a> (string matchStr, funcref iterator, string sdata, string progress_title=defaultValue)</td></tr>
<tr class="separator:a7c5307e5e7c0202d2b088fdc11887069"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table>
<h2 class="groupheader">Function Documentation</h2>
<a class="anchor" id="a90c62bdfc186e2482ccb18113a591d5e"></a>
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<div class="memproto">
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<tr>
<td class="memname">variable AppendToGraphIterator </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>sdata</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-tools_8ipf_source.html#l00026">26</a> of file <a class="el" href="pearl-tools_8ipf_source.html">pearl-tools.ipf</a>.</p>
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<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable DefaultFolderIterator </td>
<td>(</td>
<td class="paramtype">dfref&#160;</td>
<td class="paramname"><em>df</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>sdata</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-tools_8ipf_source.html#l00065">65</a> of file <a class="el" href="pearl-tools_8ipf_source.html">pearl-tools.ipf</a>.</p>
</div>
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<a class="anchor" id="a6bdd1c0b269f1d7d99843ce0cb218cc7"></a>
<div class="memitem">
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<tr>
<td class="memname">variable DefaultWaveIterator </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>sdata</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-tools_8ipf_source.html#l00018">18</a> of file <a class="el" href="pearl-tools_8ipf_source.html">pearl-tools.ipf</a>.</p>
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<div class="memitem">
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<td class="memname">string IterateDataFolders </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>matchStr</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">funcref&#160;</td>
<td class="paramname"><em>iterator</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>sdata</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>progress_title</em> = <code>defaultValue</code>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-tools_8ipf_source.html#l00079">79</a> of file <a class="el" href="pearl-tools_8ipf_source.html">pearl-tools.ipf</a>.</p>
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<td class="memname">string IterateWaves </td>
<td>(</td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>matchStr</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">funcref&#160;</td>
<td class="paramname"><em>iterator</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string&#160;</td>
<td class="paramname"><em>sdata</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-tools_8ipf_source.html#l00045">45</a> of file <a class="el" href="pearl-tools_8ipf_source.html">pearl-tools.ipf</a>.</p>
</div>
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<a class="anchor" id="aea193a1b5fbdbb2a5dec9f25f3c05c45"></a>
<div class="memitem">
<div class="memproto">
<table class="memname">
<tr>
<td class="memname">variable SumWavesIterator </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">string *&#160;</td>
<td class="paramname"><em>sdata</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>Definition at line <a class="el" href="pearl-tools_8ipf_source.html#l00034">34</a> of file <a class="el" href="pearl-tools_8ipf_source.html">pearl-tools.ipf</a>.</p>
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&#160;<span id="projectnumber">rev-distro-2.0.0-0-gfda49c3-dirty</span>
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Functions</h2></td></tr>
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<h2 class="groupheader">Function Documentation</h2>
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<p>Definition at line <a class="el" href="pearl-vector-operations_8ipf_source.html#l00026">26</a> of file <a class="el" href="pearl-vector-operations_8ipf_source.html">pearl-vector-operations.ipf</a>.</p>
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<p>Definition at line <a class="el" href="pearl-vector-operations_8ipf_source.html#l00010">10</a> of file <a class="el" href="pearl-vector-operations_8ipf_source.html">pearl-vector-operations.ipf</a>.</p>
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<p>Definition at line <a class="el" href="pearl-vector-operations_8ipf_source.html#l00018">18</a> of file <a class="el" href="pearl-vector-operations_8ipf_source.html">pearl-vector-operations.ipf</a>.</p>
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<p>Definition at line <a class="el" href="pearl-vector-operations_8ipf_source.html#l00083">83</a> of file <a class="el" href="pearl-vector-operations_8ipf_source.html">pearl-vector-operations.ipf</a>.</p>
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<p>Definition at line <a class="el" href="pearl-vector-operations_8ipf_source.html#l00101">101</a> of file <a class="el" href="pearl-vector-operations_8ipf_source.html">pearl-vector-operations.ipf</a>.</p>
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<p>Definition at line <a class="el" href="pearl-vector-operations_8ipf_source.html#l00119">119</a> of file <a class="el" href="pearl-vector-operations_8ipf_source.html">pearl-vector-operations.ipf</a>.</p>
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<td class="memname">wave set_rotation_x </td>
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<p>Definition at line <a class="el" href="pearl-vector-operations_8ipf_source.html#l00035">35</a> of file <a class="el" href="pearl-vector-operations_8ipf_source.html">pearl-vector-operations.ipf</a>.</p>
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<p>Definition at line <a class="el" href="pearl-vector-operations_8ipf_source.html#l00051">51</a> of file <a class="el" href="pearl-vector-operations_8ipf_source.html">pearl-vector-operations.ipf</a>.</p>
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<p>Definition at line <a class="el" href="pearl-vector-operations_8ipf_source.html#l00067">67</a> of file <a class="el" href="pearl-vector-operations_8ipf_source.html">pearl-vector-operations.ipf</a>.</p>
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