PEET
Particle Estimateion for Electron Tomography
Installation
PEET is shipped as a self-expanding installation script. Run ./build to
install.
An experimental config.yaml files is included using Pmodules/1.1.10 syntax. This should probably not be used until yaml support in modbuild stabilizes.
Testing
calcFSCshould print the version number
Build notes
Building was successful with Pmodules 1.1.8 but not 1.1.9 or 1.1.10.
Linking the binary is a bit of a pain. It requires gcc to be loaded to provide relatively recent versions of libstdc++.so.6. I didn't fine what exact version Matlab MCR expects, but 9.5.0 seemed to work. MCR is linked dynamically at runtime through LD_LIBRARY_PATH. This is not set in the modulefile as expected, but rather in wrapper scripts which source particle.cfg. Sed commands in pbuild::install update this file so that it reads the loaded modules correctly.