31 lines
993 B
Markdown
31 lines
993 B
Markdown
# PEET
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[Particle Estimateion for Electron Tomography](https://bio3d.colorado.edu/PEET/)
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## Installation
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PEET is shipped as a self-expanding installation script. Run `./build` to
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install.
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This module is usually used in combination with IMOD (etomo GUI).
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## Testing
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- `calcFSC` should print the version number
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## Build notes
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Linking the binary is a bit of a pain. It requires gcc to be loaded to provide
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relatively recent versions of libstdc++.so.6. I didn't fine what exact version
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Matlab MCR expects, but 9.5.0 seemed to work. MCR is linked dynamically at
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runtime through LD_LIBRARY_PATH. This is not set in the modulefile as expected,
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but rather in wrapper scripts which source particle.cfg. Sed commands in
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pbuild::install update this file so that it reads the loaded modules correctly.
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(Remark Nov. 2024: still true for version 1.17.0)
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## Versions
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According to the website (INSTALL.TXT) the following Matlab is needed :
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-1.17.0 : 2022b (Merlin7, automatically loads matlab)
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