Spencer Bliven
5233ffd6e6
- Improves the build system to install the submission scripts in bin - Add README
31 lines
739 B
Bash
Executable File
31 lines
739 B
Bash
Executable File
#!/bin/bash
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#SBATCH -p day
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#SBATCH -t 1-00:00:00
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#SBATCH -J alphafold
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#SBATCH -n 1
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#SBATCH -c 10
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# Alphafold submission script for the ra cluster
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# Usage: sbatch [slurm_opts] $ALPHAFOLD_DIR/bin/submit_merlin.sh fasta_file [max_template_date]
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#
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# Output will be in the same directory as the fasta_file.
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# Slurm logs will be in the current directory.
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#
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# 2021-08-09 Spencer Bliven, D.Ozerov
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#
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export ALPHAFOLD_DATA=/das/work/common/opt/alphafold/data
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# Need at least rc6 to see alphafold
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PMODULES_VERSION=1.0.0rc10;
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source /opt/psi/config/profile.bash;
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module --version
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module purge
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module use MX unstable Programming
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module load alphafold/ALPHAFOLD_VERSION
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module list
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exec "${ALPHAFOLD_DIR:?Error loading module}/bin/submit.sh" "$@"
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