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Merge branch '123-trilinos-deprecate-all-modules-build-with-openmpi-1-and-2' into 'master'

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Resolve "trilinos: deprecate all modules build with openmpi/1 and 2"

Closes #123

See merge request Pmodules/buildblocks!167
This commit is contained in:
gsell
2021-02-26 17:30:06 +01:00
parent f6d2468f81 bf791285d1
commit 94a586e9ae
6 changed files with 133 additions and 56 deletions
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41
HDF5/trilinos/11/variants
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trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.7.4 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.7.4 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.7.4 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.8.3 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.8.3 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.8.3 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.8.4 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.8.4 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.8.4 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.9.2 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.9.2 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.10.2 stable b:cmake/2.8.12.2 gcc/4.9.2 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.7.4 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.7.4 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.7.4 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.8.3 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.8.3 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.8.3 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.8.4 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.8.4 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.8.4 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.9.2 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.9.2 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 stable b:cmake/2.8.12.2 gcc/4.9.2 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.7.4 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.7.4 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.7.4 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.8.3 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.8.3 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.8.3 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.8.4 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.8.4 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.8.4 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.9.2 openmpi/1.6.5 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.9.2 openmpi/1.8.2 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 unstable b:cmake/3.1.3 gcc/4.9.2 openmpi/1.8.4 OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.3 unstable b:cmake/3.4.1 gcc/4.8.5 openmpi/1.10.2 b:OpenBLAS/0.2.9 b:parmetis/3.2.0
trilinos/11.14.3 unstable b:cmake/3.4.1 gcc/6.2.0 openmpi/1.10.2 b:OpenBLAS/0.2.9 b:parmetis/3.2.0
trilinos/11.14.3 unstable b:cmake/3.4.1 gcc/6.2.0 openmpi/1.10.4 b:OpenBLAS/0.2.9 b:parmetis/3.2.0
trilinos/11.14.3 unstable b:cmake/3.4.1 gcc/6.2.0 openmpi/2.0.1 b:OpenBLAS/0.2.9 b:parmetis/3.2.0

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HDF5/trilinos/11/variants.Edison
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trilinos/11.14.3 unstable b:cmake/3.6.3 gcc/6.1.0 openmpi/1.10.4 b:OpenBLAS/0.2.9 b:parmetis/3.2.0

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HDF5/trilinos/files/variants.rhel6
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#trilinos/11.10.2 deprecated b:cmake/2.8.12.2 gcc/{4.7.4,4.8.3,4.8.4,9.2.0} openmpi/{1.6.5,1.8.2,1.8.4} OpenBLAS/0.2.9 parmetis/3.2.0
#trilinos/11.12.1 deprecated b:cmake/2.8.12.2 gcc/{4.7.4,4.8.3,4.8.4,9.2.0} openmpi/{1.6.5,1.8.2,1.8.4} OpenBLAS/0.2.9 parmetis/3.2.0
#trilinos/11.14.1 deprecated b:cmake/3.1.3 gcc/{4.7.4,4.8.3,4.8.4,9.2.0} openmpi/{1.6.5,1.8.2,1.8.4} OpenBLAS/0.2.9 parmetis/3.2.0
#trilinos/11.14.3 deprecated b:cmake/3.4.1 gcc/4.8.5 openmpi/1.10.2 b:OpenBLAS/0.2.9 b:parmetis/3.2.0
#trilinos/11.14.3 deprecated b:cmake/3.4.1 gcc/6.2.0 openmpi/{1.10.2,1.10.4,2.0.1} b:OpenBLAS/0.2.9 b:parmetis/3.2.0
trilinos/12.2.1 deprecated gcc/4.8.2 openmpi/1.6.5 hdf5/1.8.12 b:cmake/3.6.3 b:OpenBLAS/0.2.9 b:parmetis/4.0.3
trilinos/12.8.1 stable gcc/{4.8.5,4.9.4,5.4.0,6.2.0} openmpi/1.10.4 b:cmake/3.6.3 b:OpenBLAS/0.2.19 b:parmetis/4.0.3
trilinos/12.10.1 stable gcc/{4.8.5,4.9.4,5.4.0,6.2.0} openmpi/1.10.4 b:cmake/3.6.3 b:OpenBLAS/0.2.19 b:parmetis/4.0.3
trilinos/12.10.1-1 deprecated gcc/{5.4.0,6.2.0} openmpi/1.10.4 hdf5/1.8.18 b:cmake/3.6.3 b:OpenBLAS/0.2.19 b:parmetis/4.0.3
trilinos/12.10.1-2 deprecated gcc/5.4.0 openmpi/1.10.4 hdf5/1.8.18 b:cmake/3.6.3 b:OpenBLAS/0.2.19 b:parmetis/4.0.3
trilinos/12.10.1-3 deprecated gcc/5.4.0 openmpi/1.10.4 hdf5/1.8.18 b:cmake/3.6.3 b:OpenBLAS/0.2.19 b:parmetis/4.0.3
trilinos/12.10.1-1 stable gcc/{5.4.0,6.2.0} openmpi/1.10.4 hdf5/1.8.18 b:cmake/3.6.3 b:OpenBLAS/0.2.19 b:parmetis/4.0.3
trilinos/12.10.1-2 stable gcc/5.4.0 openmpi/1.10.4 hdf5/1.8.18 b:cmake/3.6.3 b:OpenBLAS/0.2.19 b:parmetis/4.0.3
trilinos/12.12.1 deprecated gcc/7.3.0 openmpi/{1.10.7,2.1.2,3.0.0} hdf5/1.10.1 b:cmake/3.6.3 b:OpenBLAS/0.2.20 b:parmetis/4.0.3
trilinos/12.12.1 deprecated gcc/7.3.0 openmpi/3.1.2 hdf5/1.10.3
trilinos/12.12.1 deprecated gcc/7.3.0 openmpi/3.1.3 hdf5/1.10.4
trilinos/12.12.1 stable gcc/7.3.0 openmpi/{1.10.7,2.1.2,3.0.0,3.1.2,3.1.3} hdf5/1.10.1 b:cmake/3.6.3 b:OpenBLAS/0.2.20 b:parmetis/4.0.3
trilinos/12.12.1 stable gcc/7.4.0 openmpi/3.1.4 hdf5/1.10.5 b:cmake/3.10.3 b:OpenBLAS/0.3.7 b:parmetis/4.0.3
trilinos/12.12.1 deprecated gcc/7.4.0 openmpi/3.1.4 hdf5/1.10.5
trilinos/12.12.1 deprecated gcc/7.4.0 openmpi/3.1.4 hdf5/1.10.5 b:cmake/3.10.3 b:OpenBLAS/0.3.7 b:parmetis/4.0.3
trilinos/12.12.1 stable gcc/7.3.0 mpich/3.3 hdf5/1.10.4 b:cmake/3.9.6 b:OpenBLAS/0.2.20 b:parmetis/4.0.3
trilinos/12.12.1 stable intel/17.4 openmpi/{1.10.7,2.1.2,3.0.0} hdf5/1.10.1 b:cmake/3.6.3 b:OpenBLAS/0.2.20 b:parmetis/4.0.3
trilinos/12.12.1 deprecated intel/17.4 openmpi/{1.10.7,2.1.2,3.0.0} hdf5/1.10.1 b:cmake/3.6.3 b:OpenBLAS/0.2.20 b:parmetis/4.0.3
trilinos/12.18.1 stable gcc/{7.5.0,8.4.0,9.3.0,10.1.0} openmpi/3.1.6 hdf5/1.10.6 b:cmake/3.15.5 b:OpenBLAS/0.3.10 b:parmetis/4.0.3
#trilinos/12.12.1 unstable HDF5 intel/17.4 openmpi/1.10.7 hdf5/1.10.1
#trilinos/12.12.1 unstable HDF5 intel/17.4 openmpi/2.1.2 hdf5/1.10.1
#trilinos/12.12.1 unstable HDF5 intel/17.4 openmpi/3.0.0 hdf5/1.10.1

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MPI/trilinos/build Executable file
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#!/usr/bin/env modbuild
pbuild::set_download_url \
"https://github.com/$P/$P/tarball/$P-release-${V//./-}" \
"$P-${V_PKG}.tar.gz"
pbuild::set_sha256sum \
"trilinos-12.12.1.tar.gz:c8f2029fa36230b9f384c56139aaa33111227bcf653e73f7daf3c9efdecc1d2d"
declare -rx AR=ar
pbuild::configure() {
declare config_args=()
if [[ "${OS}" == "Linux" ]]; then
BLAS_PREFIX="${OPENBLAS_PREFIX}"
BLAS_INCLUDE_DIRS="${BLAS_PREFIX}/include"
BLAS_LIBRARY_DIRS="${BLAS_PREFIX}/lib"
BLAS_LIBRARY_NAMES="openblas"
LAPACK_PREFIX="${OPENBLAS_PREFIX}"
LAPACK_INCLUDE_DIRS="${LAPACK_PREFIX}/include"
LAPACK_LIBRARY_DIRS="${LAPACK_PREFIX}/lib"
LAPACK_LIBRARY_NAMES="openblas"
config_args+=( "-DBLAS_LIBRARY_DIRS:PATH=${BLAS_LIBRARY_DIRS}" )
config_args+=( "-DBLAS_INCLUDE_DIRS:PATH=${BLAS_LIBRARY_DIRS}" )
config_args+=( "-DBLAS_LIBRARY_NAMES:STRING=${BLAS_LIBRARY_NAMES}" )
config_args+=( "-DLAPACK_LIBRARY_DIRS:PATH=${LAPACK_LIBRARY_DIRS}" )
config_args+=( "-DLAPACK_INCLUDE_DIRS:PATH=${LAPACK_INCLUDE_DIRS}" )
config_args+=( "-DLAPACK_LIBRARY_NAMES:STRING=${LAPACK_LIBRARY_NAMES}" )
fi
if (( V_MAJOR == 12 && V_MINOR >= 12)); then
config_args+=( "-DTrilinos_ENABLE_SEACAS:BOOL=OFF" )
config_args+=( "-DTrilinos_ENABLE_OpenMP:BOOL=OFF" )
config_args+=( "-DKokkos_ENABLE_Serial:BOOL=ON" )
config_args+=( "-DKokkos_ENABLE_OpenMP:BOOL=OFF" )
config_args+=( "-DKokkos_ENABLE_Pthread:BOOL=OFF" )
config_args+=( "-DKokkos_ENABLE_Cuda:BOOL=OFF" )
config_args+=( "-DKokkos_ENABLE_Cuda_UVM:BOOL=OFF" )
config_args+=( "-DTpetra_INST_SERIAL:BOOL=ON" )
config_args+=( "-DTrilinos_ENABLE_TESTS:BOOL=OFF" )
config_args+=( "-DTrilinos_ENABLE_MueLu:BOOL=ON" )
fi
PARMETIS_INCLUDE_DIRS="${PARMETIS_PREFIX}/include"
PARMETIS_LIBRARIES="${PARMETIS_PREFIX}/lib/libparmetis.a"
METIS_INCLUDE_DIRS="${PARMETIS_PREFIX}/include/metis"
METIS_LIBRARIES="${PARMETIS_PREFIX}/lib/libmetis.a"
cmake \
-D CMAKE_BUILD_TYPE:STRING=Release \
--prefix=$PREFIX \
-DCMAKE_INSTALL_PREFIX:PATH=$PREFIX \
-DCMAKE_CXX_FLAGS:STRING="-DMPICH_IGNORE_CXX_SEEK -fPIC" \
-DCMAKE_C_FLAGS:STRING="-DMPICH_IGNORE_CXX_SEEK -fPIC" \
-DCMAKE_CXX_STANDARD:STRING="11" \
-DCMAKE_Fortran_FLAGS:STRING="-fPIC" \
-DTPL_ENABLE_DLlib:BOOL=OFF \
-DTPL_ENABLE_QT:BOOL=OFF \
-DTPL_ENABLE_MPI:BOOL=ON \
-DTPL_ENABLE_BLAS:BOOL=ON \
-DTPL_ENABLE_LAPACK:BOOL=ON \
-DTPL_ENABLE_METIS:BOOL=ON \
-DTPL_ENABLE_ParMETIS:BOOL=ON \
-DTPL_METIS_INCLUDE_DIRS:PATH=$METIS_INCLUDE_DIRS \
-DTPL_METIS_LIBRARIES:PATH=$METIS_LIBRARIES \
-DTPL_ParMETIS_INCLUDE_DIRS:PATH=$PARMETIS_INCLUDE_DIRS \
-DTPL_ParMETIS_LIBRARIES:PATH=$PARMETIS_LIBRARIES \
-DTrilinos_ENABLE_Amesos:BOOL=ON \
-DTrilinos_ENABLE_Amesos2:BOOL=ON \
-DTrilinos_ENABLE_AztecOO:BOOL=ON \
-DTrilinos_ENABLE_Belos:BOOL=ON \
-DTrilinos_ENABLE_Epetra:BOOL=ON \
-DTrilinos_ENABLE_EpetraExt:BOOL=ON \
-DTrilinos_ENABLE_Galeri:BOOL=ON \
-DTrilinos_ENABLE_Ifpack:BOOL=ON \
-DTrilinos_ENABLE_Isorropia:BOOL=ON \
-DTrilinos_ENABLE_ML:BOOL=ON \
-DTrilinos_ENABLE_NOX:BOOL=ON \
-DTrilinos_ENABLE_Optika:BOOL=OFF \
-DTrilinos_ENABLE_Teuchos:BOOL=ON \
-DTrilinos_ENABLE_Tpetra:BOOL=ON \
-DTrilinos_ENABLE_TESTS:BOOL=OFF \
"${config_args[@]}" \
"${SRC_DIR}" || exit 1
}
pbuild::add_to_group 'MPI'
pbuild::install_docfiles Copyright.txt LICENSE README RELEASE_NOTES

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MPI/trilinos/files/variants.rhel6 Normal file
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trilinos/11.10.2 deprecated b:cmake/2.8.12.2 gcc/{4.7.4,4.8.3,4.8.4,4.9.2} openmpi/{1.6.5,1.8.2,1.8.4} OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.12.1 deprecated b:cmake/2.8.12.2 gcc/{4.7.4,4.8.3,4.8.4,4.9.2} openmpi/{1.6.5,1.8.2,1.8.4} OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.1 deprecated b:cmake/3.1.3 gcc/{4.7.4,4.8.3,4.8.4,4.9.2} openmpi/{1.6.5,1.8.2,1.8.4} OpenBLAS/0.2.9 parmetis/3.2.0
trilinos/11.14.3 deprecated b:cmake/3.4.1 gcc/4.8.5 openmpi/1.10.2 b:OpenBLAS/0.2.9 b:parmetis/3.2.0
trilinos/11.14.3 deprecated b:cmake/3.4.1 gcc/6.2.0 openmpi/{1.10.2,1.10.4,2.0.1} b:OpenBLAS/0.2.9 b:parmetis/3.2.0
trilinos/11.14.3 deprecated intel/15.3 openmpi/1.8.4
trilinos/12.8.1 deprecated gcc/{4.8.5,4.9.4,5.4.0,6.2.0} openmpi/1.10.4 b:cmake/3.6.3 b:OpenBLAS/0.2.19 b:parmetis/4.0.3
trilinos/12.10.1 deprecated gcc/{4.8.5,4.9.4,5.4.0,6.2.0} openmpi/1.10.4 b:cmake/3.6.3 b:OpenBLAS/0.2.19 b:parmetis/4.0.3
trilinos/12.12.1 stable gcc/7.3.0 mpich/3.3 hdf5/1.10.4 b:cmake/3.9.6 b:OpenBLAS/0.2.20 b:parmetis/4.0.3

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MPI/trilinos/modulefile Normal file
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#%Module1.0
module-whatis "Object-Oriented Solver Framework"
module-url "http://trilinos.sandia.gov/"
module-license "BSD-like"
module-maintainer "Achim Gsell <achim.gsell@psi.ch>"
module-help "
Trilinos is a collection of open source software libraries, called packages,
intended to be used as building blocks for the development of scientific
applications. The word \"Trilinos\" is Greek and conveys the idea of \"a string
of pearls,\" suggesting a number of software packages linked together by a
common infrastructure. Trilinos was developed at Sandia National Laboratories
from a core group of existing algorithms, and utilizes the functionality of
software interfaces such as the BLAS, LAPACK, and MPI.
(Wikipedia)
"