Added SandBox/gromacs
This commit is contained in:
21
SandBox/gromacs/build
Executable file
21
SandBox/gromacs/build
Executable file
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#!/usr/bin/env modbuild
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pbuild::set_download_url "http://ftp.gromacs.org/pub/$P/$P-${V_PKG}.tar.gz"
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pbuild::add_to_group 'SandBox'
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pbuild::install_docfiles ACKNOWLEDGMENTS COPYING MANIFEST README.txt
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pbuild::pre_configure() {
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pbuild::add_configure_args "-DCMAKE_BUILD_TYPE=RELEASE"
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pbuild::add_configure_args "-DGMX_MPI=on"
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if pbuild::use_flag dp ; then
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pbuild::add_configure_args "-DGFMX_DOUBLE=on"
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fi
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if pbuild::use_flag sp ; then
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pbuild::add_configure_args "-DGFMX_DOUBLE=off"
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fi
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pbuild::add_configure_args "-DGMX_GPU=off"
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pbuild::add_configure_args "-DGMX_BUILD_OWN_FFTW=on"
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}
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3
SandBox/gromacs/files/variants
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3
SandBox/gromacs/files/variants
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gromacs/2018.3_dp unstable gcc/8.2.0 openmpi/3.1.1 Python/2.7.14 b:cmake/3.9.6
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gromacs/2018.3_sp unstable gcc/8.2.0 openmpi/3.1.1 Python/2.7.14 b:cmake/3.9.6
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18
SandBox/gromacs/modulefile
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18
SandBox/gromacs/modulefile
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#%Module1.0
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module-whatis "GROMACS is a versatile package to perform molecular dynamics"
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module-url "http://www.gromacs.org/"
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module-license "See PREFIX/share/doc/COPYING"
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module-maintainer "Marc Caubet <marc.caubet@psi.ch>"
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module-help "
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GROMACS is a versatile package to perform molecular dynamics, i.e. simulate
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the Newtonian equations of motion for systems with hundreds to millions of
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particles.
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It is primarily designed for biochemical molecules like proteins, lipids and
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nucleic acids that have a lot of complicated bonded interactions, but since
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GROMACS is extremely fast at calculating the nonbonded interactions (that
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usually dominate simulations) many groups are also using it for research on
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non-biological systems, e.g. polymers.
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"
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3
SandBox/gromacs/with_modules
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3
SandBox/gromacs/with_modules
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gcc/8.2.0
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openmpi/3.1.1
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Python/2.7.14
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