adding Xtrapol8
This commit is contained in:
@@ -89,5 +89,3 @@ Show your appreciation to those who have contributed to the project.
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## License
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For open source projects, say how it is licensed.
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## Project status
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If you have run out of energy or time for your project, put a note at the top of the README saying that development has slowed down or stopped completely. Someone may choose to fork your project or volunteer to step in as a maintainer or owner, allowing your project to keep going. You can also make an explicit request for maintainers.
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17
Xtrapol8/build
Executable file
17
Xtrapol8/build
Executable file
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#!/usr/bin/env modbuild
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pbuild::configure() {
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:
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}
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pbuild::compile() {
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:
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}
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pbuild::install(){
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mkdir "$PREFIX/bin"
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cd "$PREFIX/bin"
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tar -xf "${PMODULES_DISTFILESDIR}/Xtrapol8-${V_PKG}.tar.gz" --strip-components=1
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}
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10
Xtrapol8/files/config.yaml
Normal file
10
Xtrapol8/files/config.yaml
Normal file
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format: 1
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Xtrapol8:
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defaults:
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group: MX
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relstage: unstable
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urls:
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- url: https://github.com/ElkeDeZitter/Xtrapol8/archive/refs/tags/v${V_PKG}.tar.gz
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name: Xtrapol8-${V_PKG}.tar.gz
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versions:
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1.2.1:
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19
Xtrapol8/modulefile
Normal file
19
Xtrapol8/modulefile
Normal file
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#%Module1.0
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module-whatis "Xtrapol8 is software for the structure determination of low-occupancy states in crystallography"
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module-url "https://github.com/ElkeDeZitter/Xtrapol8"
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module-license "MIT license"
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module-maintainer "Greta Assmann - greta.assmann@psi.ch"
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module-help "
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Xtrapol8 is software for the calculation of Fourier difference maps, extrapolated structure factors and estimation of the occupancy of at triggered state that occupies the crystal
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at low occupancy. It is based on the cctbx toolbox and uses some CCP4 programs. In order to run Xtrapol8, you will need to have a proper licence for Phenix and CCP4 and have both
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software suites installed. Please use Phenix 1.19 or higher.
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An introduction into Fourier difference maps, structure factor extrapolation and the software itself can be found on the youtube channel of CCP4 (https://www.youtube.com/watch?v=H
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21L3-M_ge4)
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If Xtrapol8 was useful in your project, please cite us: De Zitter, E., Coquelle, N., Oeser, P., Barends, T. R. M., Colletier, J.-P., Xtrapol8 enables automatic elucidation of low-
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occupancy intermediate-states in crystallographic studies, Communications Biology, 5(1):640, 2022. (https://www.nature.com/articles/s42003-022-03575-7)
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"
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