adding Xtrapol8

This commit is contained in:
2024-02-23 15:57:28 +01:00
parent 6b1c9a720f
commit 59d8707eaa
4 changed files with 46 additions and 2 deletions

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## License
For open source projects, say how it is licensed.
## Project status
If you have run out of energy or time for your project, put a note at the top of the README saying that development has slowed down or stopped completely. Someone may choose to fork your project or volunteer to step in as a maintainer or owner, allowing your project to keep going. You can also make an explicit request for maintainers.

17
Xtrapol8/build Executable file
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#!/usr/bin/env modbuild
pbuild::configure() {
:
}
pbuild::compile() {
:
}
pbuild::install(){
mkdir "$PREFIX/bin"
cd "$PREFIX/bin"
tar -xf "${PMODULES_DISTFILESDIR}/Xtrapol8-${V_PKG}.tar.gz" --strip-components=1
}

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format: 1
Xtrapol8:
defaults:
group: MX
relstage: unstable
urls:
- url: https://github.com/ElkeDeZitter/Xtrapol8/archive/refs/tags/v${V_PKG}.tar.gz
name: Xtrapol8-${V_PKG}.tar.gz
versions:
1.2.1:

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Xtrapol8/modulefile Normal file
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#%Module1.0
module-whatis "Xtrapol8 is software for the structure determination of low-occupancy states in crystallography"
module-url "https://github.com/ElkeDeZitter/Xtrapol8"
module-license "MIT license"
module-maintainer "Greta Assmann - greta.assmann@psi.ch"
module-help "
Xtrapol8 is software for the calculation of Fourier difference maps, extrapolated structure factors and estimation of the occupancy of at triggered state that occupies the crystal
at low occupancy. It is based on the cctbx toolbox and uses some CCP4 programs. In order to run Xtrapol8, you will need to have a proper licence for Phenix and CCP4 and have both
software suites installed. Please use Phenix 1.19 or higher.
An introduction into Fourier difference maps, structure factor extrapolation and the software itself can be found on the youtube channel of CCP4 (https://www.youtube.com/watch?v=H
21L3-M_ge4)
If Xtrapol8 was useful in your project, please cite us: De Zitter, E., Coquelle, N., Oeser, P., Barends, T. R. M., Colletier, J.-P., Xtrapol8 enables automatic elucidation of low-
occupancy intermediate-states in crystallographic studies, Communications Biology, 5(1):640, 2022. (https://www.nature.com/articles/s42003-022-03575-7)
"