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Update README.md

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gsell
2018-05-09 12:55:44 +02:00
parent 6ab7d87953
commit 4ca64a762d
1 changed files with 43 additions and 45 deletions
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MPI/elegant/README.md
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@@ -42,54 +42,25 @@ https://ops.aps.anl.gov/publish/Pelegant_manual/node2.html
module load gcc/7.3.0 gsl/2.4 mpich/3.2.1
```
## Set used versions
```
SDDS_VERSION=3.6.1
ELEGANT_VERSION=34.2.0
```
## Setup Environment
```
DOWNLOAD_DIR='/afs/psi.ch/software/Pmodules/distfiles/elegant'
PREFIX=/opt/psi/MPI/elegant/34.2.0/mpich/3.2.1/gcc/7.3.0
PREFIX=/opt/psi/MPI/elegant/${ELEGANT_VERSION}/${MPI}/${MPI_VERSION}/${COMPILER}/${COMPILER_VERSION}
export EPICS_BASE="${PREFIX}/epics/base"
export HOST_ARCH=linux-x86_64
export EPICS_HOST_ARCH=linux-x86_64
export RPN_DEFNS="${PREFIX}/RPN_DEFNS/defns.rpn
export RPN_DEFNS="${PREFIX}/RPN_DEFNS/defns.rpn"
```
## Prepare build environment
EPICS base configuration
```
mkdir -p "${PREFIX}"
cd "${PREFIX}"
tar xvf "${DOWNLOAD_DIR}/epics.base.configure.tar.gz"
cd epics/base
make
```
Prepare configuration files for EPICS build system
```
cd "${PREFIX}"
tar xvf "${DOWNLOAD_DIR}/epics.extensions.configure.tar.gz
```
Prepare configuration files for elegant and other OAG apps
```
cd "${PREFIX}"
tar xvf "${DOWNLOAD_DIR}/oag.apps.configure.tar.gz
```
## Base configuration for SDDS and elegant
```
ARGS=()
ARGS+=( "AR=ar -rc" )
ARGS+=( "LD=ld -r" )
ARGS+=( "RANLIB=ranlib" )
ARGS+=( "GNU_DIR=${GCC_DIR}" )
ARGS+=( "CLAPACK_LIB=${ATLAS_LIBRARY_DIR}" )
ARGS+=( "ATLAS_LIB=${ATLAS_LIBRARY_DIR}" )
ARGS+=( "ATLAS_INCLUDE=${ATLAS_INCLUDE_DIR}" )
ARGS+=( "SYSGSL=1" )
ARGS+=( "LAPACK=0" )
ARGS+=( "GFORTRAN=1" )
ARGS+=( "CLAPACK=1" )
ARGS+=( "EPICS_BASE=${PREFIX}/epics/base" )
ARGS+=( "INSTALL_LOCATION=${PREFIX}" )
ARGS+=( "INSTALL_LIB=${PREFIX}/lib" )
ARGS+=( "INSTALL_SHRLIB=${PREFIX}/lib" )
@@ -97,17 +68,44 @@ ARGS+=( "INSTALL_TCLLIB=${PREFIX}/lib" )
ARGS+=( "INSTALL_BIN=${PREFIX}/bin" )
```
== Compile SDDS
## Prepare base build environment
EPICS base configuration
```
cd ${PREFIX}/epics/extensions/src/SDDS/
make "${ARGS[@]}" OP_SYS_LDLIBS="-lgfortran -lquadmath -lf2c" -C png
make "${ARGS[@]}" OP_SYS_LDLIBS="-lgfortran -lquadmath -lf2c" -C pgapack
make "${ARGS[@]}" OP_SYS_LDLIBS="-lgfortran -lquadmath -lf2c"
make "${ARGS[@]}" OP_SYS_LDLIBS="-lgfortran -lquadmath -lf2c" MPI=1 -C SDDSlib
mkdir -p "${PREFIX}"
mkdir -p "${RPN_DEFNS%/*}"
cp "${DOWNLOAD_DIR}/defns.rpn" "${RPN_DEFNS}"
cd "${PREFIX}"
tar xvf "${DOWNLOAD_DIR}/epics.base.configure.tar.gz"
cd epics/base
make
```
== Compile elegant
## Unpack EPICS extensions and OAG apps configuration
```
cd "${PREFIX}"
tar xvf "${DOWNLOAD_DIR}/epics.extensions.configure.tar.gz"
tar xvf "${DOWNLOAD_DIR}/oag.apps.configure.tar.gz"
cd "${PREFIX}/oag/apps/configure"
```
## Build required tools and libraries from SDDS
```
cd "${PREFIX}"
tar xvf "${DOWNLOAD_DIR}/SDDS.${SDDS_VERSION}.tar.gz"
make -e "${ARGS[@]}" -C namelist
make -e "${ARGS[@]}" -C pgapack
make -e "${ARGS[@]}" -C SDDSlib
make -e "${ARGS[@]}" -C SDDSlib clean
make -e "${ARGS[@]}" MPI=1 -C SDDSlib
```
== Compile (P)elegant
```
cd "${PREFIX}"
tar xvf "${DOWNLOAD_DIR}/elegant.${ELEGANT_VERSION}"
PATH+=":${PREFIX}/bin"
cd "${PREFIX}/oag/apps/src/physics"