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Jungfraujoch/reader/CMakeLists.txt
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v1.0.0-rc.178 (#88)
* Rugnux: Processes serial crystallography data from XFELs - SACLA (MPCCD), PAL-XFEL and European XFEL (CXI), LCLS (XTC) and SwissFEL Alvra (JUNGFRAU with a CrystFEL module geometry) - with several files or Jungfraujoch master files merged in one run (`rugnux *_master.h5`).
* Rugnux: Stills processing takes a known unit cell and space group as a starting point, finds the beam centre (and, with a cell, the detector distance) from the images, detects the saturation level in other facilities' files and refines the placement of individual detector panels.
* Rugnux: The stills report gives R_split and CC1/2 from frame half-sets, comparable with CrystFEL.
* jfjoch_viewer: Opens the same XFEL file formats.
* Validation: A stills battery checks Rugnux against deposited structures from SACLA, PAL-XFEL, LCLS, European XFEL and SwissFEL.
* Rugnux: More reliable convergence of rotation scaling, and live molecular replacement starts as soon as the model is uploaded.
* jfjoch_broker: Initialize clears the previous dataset's bearer tokens, image buffer and live Rugnux status, and a slow CUDA JIT cache is reported at start.

Reviewed-on: #88
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
2026-10-21 11:20:01 +02:00

57 lines
1.8 KiB
CMake

ADD_LIBRARY(JFJochReader STATIC
JFJochReader.cpp JFJochReader.h
JFJochHDF5Reader.cpp
JFJochHDF5Reader.h
JFJochMultiReader.cpp
JFJochMultiReader.h
SweepLayout.cpp
SweepLayout.h
MiniCBF.cpp
MiniCBF.h
JFJochCBFReader.cpp
JFJochCBFReader.h
MarCCD.cpp
MarCCD.h
JFJochMarCCDReader.cpp
JFJochMarCCDReader.h
CrystFELGeometry.cpp
CrystFELGeometry.h
JFJochXFELReader.cpp
JFJochXFELReader.h
DetectorLayout.h
SMV.cpp
SMV.h
JFJochSMVReader.cpp
JFJochSMVReader.h
XTC.cpp
XTC.h
JFJochXTCReader.cpp
JFJochXTCReader.h
NXmxModules.cpp
NXmxModules.h
HDF5ImageLocator.cpp
JFJochStartMessageReader.cpp
JFJochStartMessageReader.h
JFJochImageBufferReader.cpp
JFJochImageBufferReader.h
HDF5ImageLocator.h
HDF5ImageSource.cpp
HDF5ImageSource.h
HDF5MetadataSource.cpp
HDF5MetadataSource.h
JFJochReaderImage.cpp
JFJochReaderImage.h
JFJochReaderDataset.cpp
JFJochReaderDataset.h
JFJochReaderSpots.h
)
# NB: JFJochHttpReader (the viewer's live-broker HTTP client) lives in viewer/ and links Mbed TLS;
# it is deliberately NOT part of this always-built library, so the broker/writer never pull in a
# TLS stack.
# tiff: the marCCD reader's files are ordinary uncompressed TIFFs, so libtiff - which the build
# already fetches for JFJochPreview in every mode - reads the pixels and there is no new dependency.
TARGET_LINK_LIBRARIES(JFJochReader JFJochImageAnalysis JFJochAPI JFJochCommon JFJochZMQ JFJochLogger
JFJochHDF5Wrappers CBORStream2FrameSerialize tiff ZLIB::ZLIB
${CMAKE_DL_LIBS})