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leonarski_fandClaude Opus 5.5 e6bbfea4c4 Indexing: a coplanar cell leaves the frame unindexed instead of throwing 
The online broker cancelled a collection with "Crystal lattice is coplanar and has no reciprocal
cell". The candidate filter in PostIndexingRefinement (used by FFT, FFTW and ffbidx) tests lengths,
angles and spot count only; three rows 120 deg apart in one plane pass all of them, and spots along
the plane normal index as (0,0,0). Such a candidate - from ffbidx, or one the least-squares
refinement walked flat - went on to LatticeSearch and XtalOptimizer, which refuses it and leaves it
in place, and then reached Astar() in AnalyzeIndexing/prediction, which throws; the receiver turns
that into a cancelled acquisition.

- Refine() rejects a candidate below MIN_BASIS_VOLUME_FRACTION, like any other bad candidate.
- XtalOptimizerInternal builds the refined lattice first and counts a coplanar result as a failed
  refinement, writing nothing back (the residual's volume clamp lets a solve end there and report
  success).

Test: PostIndexingRefinement_CoplanarCandidateIsRejected threw the exact message before the fix.
rugnux p.mtz unchanged on the three in-house reference sets at --prepass-fraction 1.

Co-Authored-By: Claude Opus 5.5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01SVmAWnzCmRKAXVUCdc4iNi
2026-10-07 13:55:44 +02:00
..
crystfel
v1.0.0.rc-161 (#71)
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data
v1.0.0-rc.173 (#83)
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test_data
v1.0.0-rc.160 (#70)
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xds
v1.0.0-rc.134 (#43)
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xds_durin
version 1.0.0-rc.13
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xds_neggia
version 1.0.0-rc.13
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AcquisitionCountersTest.cpp
v1.0.0-rc.36
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AdaptiveSpotFinderCPUTest.cpp
v1.0.0-rc.173 (#83)
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AdaptiveSpotFinderGPUTest.cpp
1.0.0-rc.174 (#84)
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AdaptiveThresholdTest.cpp
v1.0.0-rc.166 (#76)
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AnisotropyAnalysisTest.cpp
1.0.0-rc.174 (#84)
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AutoIncrVectorTest.cpp
v1.0.0-rc.139 (#49)
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AzimuthalIntegrationTest.cpp
v1.0.0-rc.173 (#83)
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BandwidthEstimateTest.cpp
v1.0.0-rc.173 (#83)
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BeamCenterFFTGPUTest.cpp
v1.0.0-rc.169 (#79)
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BeamCenterFFTTest.cpp
v1.0.0-rc.169 (#79)
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BeamCenterFromBackgroundTest.cpp
1.0.0-rc.174 (#84)
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BearerTokensTest.cpp
v1.0.0-rc.173 (#83)
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BraggIntegrationEngineCompressedImageTest.cpp
1.0.0-rc.174 (#84)
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BraggIntegrationEngineCPUTest.cpp
1.0.0-rc.174 (#84)
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BraggIntegrationEngineGPUTest.cpp
1.0.0-rc.174 (#84)
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BraggStencilTest.cpp
1.0.0-rc.174 (#84)
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BrokerHttpAuthTest.cpp
v1.0.0-rc.173 (#83)
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BSLZ4DecoderGPUFuzzTest.cpp
v1.0.0.rc-161 (#71)
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BSLZ4DecoderGPUTest.cpp
v1.0.0.rc-161 (#71)
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CalcBraggPredictionTest.cpp
v1.0.0-rc.173 (#83)
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CalibrationTest.cpp
v1.0.0-rc.166 (#76)
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CBORTest.cpp
v1.0.0-rc.173 (#83)
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CCTest.cpp
v1.0.0-rc.146 (#56)
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CheckImageOutput.h
v1.0.0-rc.36
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CMakeLists.txt
rugnux: remove --estimate-beam-center and the spot-symmetry beam-centre estimator
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CoordTest.cpp
v1.0.0-rc.41
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CorrectionSurfaceGPUTest.cpp
1.0.0-rc.174 (#84)
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CrystalLatticeTest.cpp
v1.0.0-rc.166 (#76)
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CrystalSettingTest.cpp
v1.0.0-rc.173 (#83)
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CudaHandledErrorTest.cpp
v1.0.0-rc.172 (#82)
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CUDAMemHelpersTest.cpp
v1.0.0-rc.173 (#83)
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DetectorGeometryTest.cpp
v1.0.0-rc.103 (#8)
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DetectorSettingsTest.cpp
v1.0.0-rc.139 (#49)
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DetectorSetupTest.cpp
v1.0.0.rc-162 (#72)
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DetGeomCalibTest.cpp
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DiagnosticOutputTest.cpp
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DiffractionExperimentTest.cpp
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DiffractionGeometryTest.cpp
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DiffractionSpotTest.cpp
v1.0.0.rc-161 (#71)
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enospc_shim.c
SHIM library improvements from the HDF Group
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FPGAFrameGeneratorTest.cpp
version 1.0.0-rc.25
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FPGAHLSModulesTest.cpp
v1.0.0-rc.91
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FPGAHostWriterTest.cpp
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FPGAIntegrationTest.cpp
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FPGANetworkTest.cpp
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FPGAPTPTest.cpp
v1.0.0-rc.72
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FPGASpotFindingUnitTest.cpp
v.1.0.0-rc.32
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FrameTransformationTest.cpp
v1.0.0-rc.172 (#82)
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FrenchWilsonTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
GoniometerAxisTest.cpp
v1.0.0-rc49
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GridScanSettingsTest.cpp
v1.0.0-rc.166 (#76)
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HDF5WritingTest.cpp
v1.0.0-rc.167 (#77)
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HistogramTest.cpp
v1.0.0-rc.121 (#28)
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HKLKeyTest.cpp
v1.0.0-rc.124 (#31)
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HotPixelFinderTest.cpp
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ImageBufferTest.cpp
v1.0.0-rc.128 (#35)
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ImageMetadataTest.cpp
v1.0.0-rc.103 (#8)
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ImagePreprocessorGPUFusedTest.cpp
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ImageSpotFinderCPUTest.cpp
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ImageSpotFinderGPUTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
IndexingUnitTest.cpp
Indexing: a coplanar cell leaves the frame unindexed instead of throwing
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JFCalibrationTest.cpp
v1.0.0-rc.36
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JFConversionTest.cpp
version 1.0.0-rc.25
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jfjoch_hdf5_enospc_test.cpp
v1.0.0.rc-162 (#72)
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JFJochReaderTest.cpp
1.0.0-rc.174 (#84)
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JFJochReceiverIntegrationTest.cpp
v1.0.0-rc.150 (#60)
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JFJochReceiverLiteTest.cpp
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JFJochReceiverPlotsTest.cpp
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JFJochReceiverProcessingTest.cpp
v1.0.0-rc.160 (#70)
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JFJochStateMachineTest.cpp
v1.0.0-rc.169 (#79)
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JFPedestalTest.cpp
version 1.0.0-rc.25
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JPEGTest.cpp
v1.0.0-rc.173 (#83)
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LatticeReductionTest.cpp
v1.0.0-rc.153 (#63)
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LatticeSearchTest.cpp
v1.0.0-rc.173 (#83)
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LePageLatticeTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
LoadReferenceMtzFreeFlagsTest.cpp
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LoadReferenceSfCifTest.cpp
v1.0.0-rc.173 (#83)
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LossyFilterTest.cpp
version 1.0.0-rc.25
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MergeScaleTest.cpp
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ModelMaskGPUTest.cpp
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ModelScaleGPUTest.cpp
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ModelScalingTest.cpp
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ModelValidationTest.cpp
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ModuleSummationTest.cpp
version 1.0.0-rc.27 minor fixes
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MovingAverageTest.cpp
v1.0.0-rc.31
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MultiLatticeSearchTest.cpp
v1.0.0-rc.148 (#58)
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nxmx_geometry_dials_test.py
v1.0.0.rc-162 (#72)
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ParallelForTest.cpp
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PedestalCalcTest.cpp
v1.0.0-rc.97
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PixelMaskTest.cpp
v1.0.0.rc-161 (#71)
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PortableTest.cpp
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PostRefineTest.cpp
v1.0.0-rc.173 (#83)
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PreflightTest.cpp
v1.0.0-rc.165 (#75)
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PreviewCounterTest.cpp
version 1.0.0-rc.25
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RawToConvertedGeometryTest.cpp
v1.0.0-rc.97
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RegressionTest.cpp
1.0.0-rc.89
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ReindexAmbiguityTest.cpp
v1.0.0-rc.172 (#82)
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ResolutionShellsTest.cpp
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ResultReportTest.cpp
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RfreeFlagsTest.cpp
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RingsFromProfileTest.cpp
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ROIIntegrationCPUTest.cpp
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ROIIntegrationGPUTest.cpp
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ROIMapTest.cpp
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RotationIndexerTest.cpp
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RotationScaleWalkTest.cpp
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RugnuxLargeTest.cpp
v1.0.0-rc.173 (#83)
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RugnuxTest.cpp
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SearchSpaceGroupTest.cpp
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SearchSpaceGroupTwinTest.cpp
v1.0.0-rc.169 (#79)
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ShadowFinderTest.cpp
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SphericalHarmonicSurfaceTest.cpp
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SpindleBlindFractionTest.cpp
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SpindleCuspLossTest.cpp
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2026-09-09 07:25:13 +02:00
SpotExtractorGPUParityTest.cpp
v1.0.0.rc-161 (#71)
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SpotFootprintTest.cpp
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SpotUtilsTest.cpp
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StatusVectorTest.cpp
v1.0.0-rc.127 (#34)
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StreamWriterTest.cpp
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StrongPixelSetTest.cpp
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SweepLayoutTest.cpp
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SyntheticMergedReflections.h
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TCPImagePusherTest.cpp
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TestData.h
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ThreadSafeFIFOSetTest.cpp
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TIFFTest.cpp
v1.0.0-rc.153 (#63)
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TimeTest.cpp
v1.0.0-rc.96 (#1)
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TopPixelsTest.cpp
v1.0.0-rc.121 (#28)
2025-12-12 21:24:20 +01:00
TranslationalNCSTest.cpp
v1.0.0-rc.172 (#82)
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TwinningAnalysisTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
UnitCellTest.cpp
v1.0.0-rc.146 (#56)
2026-05-28 18:48:35 +02:00
WilsonOutliersTest.cpp
v1.0.0-rc.173 (#83)
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WriteReflectionsTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
XDSPluginTest.cpp
v1.0.0.rc-161 (#71)
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XtalOptimizerTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
XtalRefineCeres.h
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
XtalRefineTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
ZMQImagePusherTest.cpp
v1.0.0-rc.169 (#79)
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ZMQMetadataSocketTest.cpp
v1.0.0-rc.133
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ZMQPreviewSocketTest.cpp
version 1.0.0-rc.25
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ZSTDCompressorTest.cpp
v1.0.0-rc.173 (#83)
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