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leonarski_fandClaude Opus 5.5 e39489dfe0 ModelScaleGPU: the rigid body's scale fit on the GPU 
gemmi's Scaling<float> fit as RigidBodyTarget uses it - fit_isotropic_b_approximately() and the
Levenberg-Marquardt of fit_parameters() with k_sol and b_sol fixed - and FitModelScale's k_sol/b_sol
grid, with the sums over the reflections on the device (double, fixed launch shape, shuffle tree per
warp, warps and then blocks summed in order: no float atomics, bit-identical repeats). The LevMar
control is gemmi's, ported line for line to the host and unrolled into its requests, so the 88 coarse
and up to 25 fine grid fits share one launch per step.

Against gemmi on real zone hkl sets with synthetic amplitudes: k_overall and b* within 1e-9..1e-5
relative, the same grid winner every time, R within 1e-7.

Co-Authored-By: Claude Opus 5.5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01D1G8gJVAy6gp1K5Dz3NE5C
2026-09-28 16:56:34 +02:00
..
crystfel
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
data
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
test_data
v1.0.0-rc.160 (#70)
2026-07-19 09:39:28 +02:00
xds
v1.0.0-rc.134 (#43)
2026-04-09 13:30:47 +02:00
xds_durin
version 1.0.0-rc.13
2024-10-05 13:14:49 +02:00
xds_neggia
version 1.0.0-rc.13
2024-10-05 13:14:49 +02:00
AcquisitionCountersTest.cpp
v1.0.0-rc.36
2025-05-05 19:32:22 +02:00
AdaptiveSpotFinderCPUTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
AdaptiveSpotFinderGPUTest.cpp
GPU adaptive spot finder: sigma clips from a histogram, one image pass instead of three
2026-09-27 21:38:45 +02:00
AdaptiveThresholdTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
AnisotropyAnalysisTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
AutoIncrVectorTest.cpp
v1.0.0-rc.139 (#49)
2026-04-29 09:50:50 +02:00
AzimuthalIntegrationTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
BandwidthEstimateTest.cpp
rugnux: measure the X-ray bandwidth from the pre-scan's spot shapes (reported only)
2026-09-23 20:42:46 +02:00
BeamCenterFFTGPUTest.cpp
v1.0.0-rc.169 (#79)
2026-09-15 17:09:31 +02:00
BeamCenterFFTTest.cpp
v1.0.0-rc.169 (#79)
2026-09-15 17:09:31 +02:00
BeamCenterFromBackgroundTest.cpp
v1.0.0-rc.169 (#79)
2026-09-15 17:09:31 +02:00
BeamCenterFromSpotsTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
BearerTokensTest.cpp
Per-dataset bearer tokens in the broker; viewer token, model option, grid-scan plot, dark theme, tutorial
2026-09-27 10:30:06 +02:00
BraggIntegrationEngineCompressedImageTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
BraggIntegrationEngineGPUTest.cpp
Bragg integration: a ring the neighbours starved is taken whole, not dropped
2026-09-28 00:11:01 +02:00
BraggStencilTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
BrokerHttpAuthTest.cpp
Per-dataset bearer tokens in the broker; viewer token, model option, grid-scan plot, dark theme, tutorial
2026-09-27 10:30:06 +02:00
BSLZ4DecoderGPUFuzzTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
BSLZ4DecoderGPUTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
CalcBraggPredictionTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
CalibrationTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
CBORTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
CCTest.cpp
v1.0.0-rc.146 (#56)
2026-05-28 18:48:35 +02:00
CheckImageOutput.h
v1.0.0-rc.36
2025-05-05 19:32:22 +02:00
CMakeLists.txt
ModelScaleGPU: the rigid body's scale fit on the GPU
2026-09-28 16:56:34 +02:00
CoordTest.cpp
v1.0.0-rc.41
2025-06-10 18:14:04 +02:00
CrystalLatticeTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
CrystalSettingTest.cpp
Rugnux: write the standard setting, or the user's; match a reference MTZ on its own axes
2026-09-25 20:16:42 +02:00
CudaHandledErrorTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
CUDAMemHelpersTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
DetectorGeometryTest.cpp
v1.0.0-rc.103 (#8)
2025-11-19 09:40:50 +01:00
DetectorSettingsTest.cpp
v1.0.0-rc.139 (#49)
2026-04-29 09:50:50 +02:00
DetectorSetupTest.cpp
v1.0.0.rc-162 (#72)
2026-08-25 08:21:39 +02:00
DetGeomCalibTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
DiagnosticOutputTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
DiffractionExperimentTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
DiffractionGeometryTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
DiffractionSpotTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
enospc_shim.c
SHIM library improvements from the HDF Group
2026-05-08 11:39:51 +02:00
FPGAFrameGeneratorTest.cpp
version 1.0.0-rc.25
2024-11-22 21:25:20 +01:00
FPGAHLSModulesTest.cpp
v1.0.0-rc.91
2025-10-20 20:43:44 +02:00
FPGAHostWriterTest.cpp
v1.0.0-rc.34
2025-04-14 11:52:06 +02:00
FPGAIntegrationTest.cpp
v1.0.0-rc.97
2025-11-09 12:42:27 +01:00
FPGANetworkTest.cpp
v1.0.0-rc.72
2025-09-08 20:28:59 +02:00
FPGAPTPTest.cpp
v1.0.0-rc.72
2025-09-08 20:28:59 +02:00
FPGASpotFindingUnitTest.cpp
v.1.0.0-rc.32
2025-03-24 12:16:33 +01:00
FrameTransformationTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
FrenchWilsonTest.cpp
Rugnux: French-Wilson amplitudes as ctruncate gives them
2026-09-26 13:43:59 +02:00
GoniometerAxisTest.cpp
v1.0.0-rc49
2025-06-18 15:19:18 +02:00
GridScanSettingsTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
HDF5WritingTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
HistogramTest.cpp
v1.0.0-rc.121 (#28)
2025-12-12 21:24:20 +01:00
HKLKeyTest.cpp
v1.0.0-rc.124 (#31)
2026-02-01 13:29:33 +01:00
HotPixelFinderTest.cpp
HotPixelFinder: the defective-pixel pass on the GPU, bit-identical
2026-09-27 09:32:26 +02:00
ImageBufferTest.cpp
v1.0.0-rc.128 (#35)
2026-03-03 22:24:44 +01:00
ImageMetadataTest.cpp
v1.0.0-rc.103 (#8)
2025-11-19 09:40:50 +01:00
ImagePreprocessorGPUFusedTest.cpp
v1.0.0.rc-162 (#72)
2026-08-25 08:21:39 +02:00
ImageSpotFinderCPUTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
ImageSpotFinderGPUTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
IndexingUnitTest.cpp
rugnux: report-only supercell probe - the eight parity classes of the doubled cell
2026-09-25 06:02:50 +02:00
JFCalibrationTest.cpp
v1.0.0-rc.36
2025-05-05 19:32:22 +02:00
JFConversionTest.cpp
version 1.0.0-rc.25
2024-11-22 21:25:20 +01:00
jfjoch_hdf5_enospc_test.cpp
v1.0.0.rc-162 (#72)
2026-08-25 08:21:39 +02:00
JFJochReaderTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
JFJochReceiverIntegrationTest.cpp
v1.0.0-rc.150 (#60)
2026-06-15 20:24:15 +02:00
JFJochReceiverLiteTest.cpp
pixel_mask_applied is false on the DECTRIS broker path
2026-09-23 21:17:42 +02:00
JFJochReceiverPlotsTest.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
JFJochReceiverProcessingTest.cpp
v1.0.0-rc.160 (#70)
2026-07-19 09:39:28 +02:00
JFJochStateMachineTest.cpp
v1.0.0-rc.169 (#79)
2026-09-15 17:09:31 +02:00
JFPedestalTest.cpp
version 1.0.0-rc.25
2024-11-22 21:25:20 +01:00
JPEGTest.cpp
v1.0.0-rc.40
2025-05-28 18:49:27 +02:00
LatticeReductionTest.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
LatticeSearchTest.cpp
Rugnux: test angle promotions of the metric symmetry; score model frames at the data's best indexing
2026-09-26 13:43:58 +02:00
LePageLatticeTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
LoadReferenceMtzFreeFlagsTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
LoadReferenceSfCifTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
LossyFilterTest.cpp
version 1.0.0-rc.25
2024-11-22 21:25:20 +01:00
MergeScaleTest.cpp
Merge statistics: R_meas weighted as the merge weights each observation
2026-09-25 04:52:24 +02:00
ModelScaleGPUTest.cpp
ModelScaleGPU: the rigid body's scale fit on the GPU
2026-09-28 16:56:34 +02:00
ModelScalingTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
ModelValidationTest.cpp
rugnux --model null: redraw a replicate the rigid body carried onto the model's own orientation
2026-09-28 12:45:38 +02:00
ModuleSummationTest.cpp
version 1.0.0-rc.27 minor fixes
2024-12-04 20:58:51 +01:00
MovingAverageTest.cpp
v1.0.0-rc.31
2025-03-02 13:15:28 +01:00
MultiLatticeSearchTest.cpp
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
nxmx_geometry_dials_test.py
v1.0.0.rc-162 (#72)
2026-08-25 08:21:39 +02:00
ParallelForTest.cpp
v1.0.0.rc-162 (#72)
2026-08-25 08:21:39 +02:00
PedestalCalcTest.cpp
v1.0.0-rc.97
2025-11-09 12:42:27 +01:00
PixelMaskTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
PortableTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
PostRefineTest.cpp
Rugnux: report the oscillation the run integrated at; test the rotation-scale fit on a simulated sweep
2026-09-24 11:37:38 +02:00
PreflightTest.cpp
v1.0.0-rc.165 (#75)
2026-08-27 22:16:54 +02:00
PreviewCounterTest.cpp
version 1.0.0-rc.25
2024-11-22 21:25:20 +01:00
RawToConvertedGeometryTest.cpp
v1.0.0-rc.97
2025-11-09 12:42:27 +01:00
RegressionTest.cpp
1.0.0-rc.89
2025-10-01 22:54:40 +02:00
ReindexAmbiguityTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
ResolutionShellsTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
ResultReportTest.cpp
Rugnux report: low warning thresholds, worded as prompts to check; ice apart from powder
2026-09-26 14:02:05 +02:00
RfreeFlagsTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
RingsFromProfileTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
ROIIntegrationCPUTest.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ROIIntegrationGPUTest.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ROIMapTest.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
RotationIndexerTest.cpp
tests: a rotation-indexer case in [portable], on the Auto indexer choice
2026-09-28 00:16:32 +02:00
RotationScaleWalkTest.cpp
Rugnux: walk the goniometer rotation scale to its fixed point, decided on the whole sweep
2026-09-24 11:34:06 +02:00
RugnuxLargeTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
RugnuxTest.cpp
Beam-centre check: carry both centres when only lean first passes index, decide on the merge
2026-09-24 13:44:52 +02:00
SearchSpaceGroupTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
SearchSpaceGroupTwinTest.cpp
v1.0.0-rc.169 (#79)
2026-09-15 17:09:31 +02:00
ShadowFinderTest.cpp
Merge branch 'shadow-6jgh-dimfield' into r4-integration
2026-09-27 10:10:07 +02:00
SphericalHarmonicSurfaceTest.cpp
Rugnux: spherical-harmonic crystal-frame absorption as a candidate surface
2026-09-26 13:43:59 +02:00
SpindleBlindFractionTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
SpindleCuspLossTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
SpotExtractorGPUParityTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
SpotUtilsTest.cpp
Rugnux report: low warning thresholds, worded as prompts to check; ice apart from powder
2026-09-26 14:02:05 +02:00
StatusVectorTest.cpp
v1.0.0-rc.127 (#34)
2026-03-02 15:57:12 +01:00
StreamWriterTest.cpp
v1.0.0-rc.97
2025-11-09 12:42:27 +01:00
StrongPixelSetTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
SweepLayoutTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
SyntheticMergedReflections.h
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
TCPImagePusherTest.cpp
v1.0.0-rc.157 (#67)
2026-07-11 07:19:11 +02:00
TestData.h
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
ThreadSafeFIFOSetTest.cpp
v1.0.0-rc.135 (#44)
2026-04-16 11:59:59 +02:00
TIFFTest.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
TimeTest.cpp
v1.0.0-rc.96 (#1)
2025-11-02 13:45:57 +01:00
TopPixelsTest.cpp
v1.0.0-rc.121 (#28)
2025-12-12 21:24:20 +01:00
TranslationalNCSTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
TwinningAnalysisTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
UnitCellTest.cpp
v1.0.0-rc.146 (#56)
2026-05-28 18:48:35 +02:00
WilsonOutliersTest.cpp
Merge: a clipped observation is no witness in the Wilson test
2026-09-24 07:26:42 +02:00
WriteReflectionsTest.cpp
tests: jfjoch_portable_test, quick [portable] checks for the macOS and Windows jobs
2026-09-27 23:44:53 +02:00
XDSPluginTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
XtalOptimizerTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
ZMQImagePusherTest.cpp
v1.0.0-rc.169 (#79)
2026-09-15 17:09:31 +02:00
ZMQMetadataSocketTest.cpp
v1.0.0-rc.133
2026-03-26 20:50:33 +01:00
ZMQPreviewSocketTest.cpp
version 1.0.0-rc.25
2024-11-22 21:25:20 +01:00
ZSTDCompressorTest.cpp
Merge branch 'cpu-fused-pixels' into rc173 (CPU: decode, preprocess and ring statistics fused per bitshuffle block)
2026-09-28 02:11:35 +02:00