leonarski_fandClaude Opus 5.5
dc784c073d
SpotToSave gains int16_t panel (-1 = no panel table). It sits in the padding after the two bools, so sizeof(SpotToSave) stays 80. It is serialised only where it is set: CBOR spot key "panel", HDF5 /entry/MX/peakPanel (data file, plus a virtual dataset in a VDS master when the start message has panels), read back by HDF5MetadataSource. For a flat detector none of these is written, so files and streams for existing data are byte-for-byte unchanged. The start message carries the panel table (detector_modules, CBOR key absent when empty), filled from the experiment; JFJochHttpReader takes it, so a stream viewer knows the panels too. AssignModules takes the spot's panel id where it has one - the stored pixel box it was found in - and falls back to the plane position otherwise (every spot until per-panel spot finding sets the id). Reflection deliberately gets no panel id (owner decision): it is needed only between prediction and integration, and the struct feeds GPU layout and memory budgets. Tests: CBORSerialize_SpotPanelId, CBORSerialize_StartDetectorModules, JFJochReader_PanelId (VDS/legacy/integrated, with and without panels). Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_015CeEGgpKdfkCTJb3YNMJcu
Jungfraujoch
Application to receive and analyse data from the PSI JUNGFRAU and EIGER detectors, together with
rugnux, its program for processing stored diffraction data - rotation and serial, macromolecular
and small-molecule - from images to merged reflections.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.