leonarski_fandClaude Fable 5.1
d122118d73
Byte-identical: every pass is element by element in the serial loop's order, or a copy that is no longer made. - The engine's gradients are read in place from its pinned buffers and widened to double on the threads (RefinementGPUEngine::HostGradient/HostRestraintGradient); the positions go up from a pinned vector of the engine's host side; the model's atom pointers are kept between calls (the model is the context's own). - Context: the riders moved and folded on the threads - a parent takes its riders in index order through a CSR list (SetRiderParents), as the serial walk added them. - AtomTarget: the parameters set and the gradient assembled on the threads; the per-atom gradient vectors kept between evaluations (7 MB each on a large model: made anew, their pages fault in every time). - RefinementMinimiser: the sweeps over the parameters (x + alpha d, s, y) on the threads it is given, the dot products the serial chains they were; Direction()'s working vector and a let-go pair's vectors reused. A/B against the frozen combined2 binary, one lock hold each, outputs identical but provenance lines: cytc refinement 1.600 -> 1.548 s (live), 1.724 -> 1.668 (CLI); thau 1.906 -> 1.885, 2.031 -> 2.027; 4nwv (with the commit before) 39.9 -> 35.5 s, the ladder 14.6 -> 12.7, each step 8.3 -> 7.2. Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_015CeEGgpKdfkCTJb3YNMJcu
Jungfraujoch
Application to receive and analyse data from the PSI JUNGFRAU and EIGER detectors, together with
rugnux, its program for processing stored diffraction data - rotation and serial, macromolecular
and small-molecule - from images to merged reflections.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.