leonarski_f
c3c5a32a0d
RUGNUX: a model run also refines the model it placed; the model can be given as an input; only the unmerged MTZ is written by default; the _process.h5 is not a default output; a short "when a run fails" note. TUTORIAL: the .ins, the refined model/maps/blobs, the log and _modules.h5 in the output list; the report is not written with -o ""; stills: -X Auto picks ffbidx with a cell, a run over several files. FORMATS: the XFEL stills formats and model/reference inputs told by content. CALIBRATION: -C and -S as the calibrant. INSTALL: the CPU path runs every indexer and the refinement. MODEL_AND_REFERENCE: the refined model is written as .pdb too. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_015CeEGgpKdfkCTJb3YNMJcu (cherry picked from commit 0062d72b95e996438ddc65dc343b526c84daa7fb)
Jungfraujoch
Application to receive and analyse data from the PSI JUNGFRAU and EIGER detectors, together with
rugnux, its program for processing stored diffraction data - rotation and serial, macromolecular
and small-molecule - from images to merged reflections.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.