99617c549a305ddd566a874db77c3682a04a7fcf
Document the newest rc.160 work: rotation geometry post-refinement (now default-on), the opt-in per-batch relative-B, the always-on radiation-damage report, net-absence space-group centering ranking, and software/geometry provenance in the merged mmCIF. Add a §7.5 for the two-pass post-refinement. Drop the removed .hkl output from RUGNUX.md and add the new CLI options (--rotation-no-postrefine, --relative-b, --refine-geometry, --background-trim, --stills-modulation, --still-partiality, --spot-low-resolution, --min-pix-per-spot, -S symbol, -r flex). Add a plain-lysozyme (HEWL) carve-out to the no-sample-identity rule: the field's universal standard specimen and its reference cell are allowed, while named user datasets and every other sample stay forbidden. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Jungfraujoch
Application to receive data from the PSI JUNGFRAU and EIGER detectors.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.
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