leonarski_fandClaude Opus 4.8
7ceffde5a4
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Stage B of SearchSpaceGroup chose the largest centering that explained the most absences and was self-consistent, ranking candidates by the gross observed-absent count. A false super-centering over-claims: on a C222 crystal, F222 predicts every C absence (all genuinely weak) PLUS a block of C-present reflections it wrongly calls absent. Its absent class is then bimodal - many true zeros diluting a strong block - so its mean <I/sigma>abs (and the violation-rate arm) slip under the centering strength gate, which cannot see the over-claim in isolation. With the gross-count ranking F222 then beat the true C222, and the strength gate is scale-invariant here, so real C-centered data trips it identically (the rotation battery just has no C-centered crystal on this path; the synthetic unit test does). Rank instead by the absences GENUINELY explained, absent_observed - absent_violations, then by fewer violations, then lower space-group number. C222 and F222 net to the same count (F222's genuine absences ARE C222's), so the fewer-violations tie-break keeps the honest, less-centred C222. Symmetric: on a real F222 crystal F explains strictly more weak absences and still wins. Also tighten the "indistinguishable alternatives" grouping to require the same absent AND violation counts, so a super-centering is never reported as an equal alternative. No tuned threshold is changed; the ranking is a no-op for any 0-violation winner. Fixes the SearchSpaceGroup C222 synthetic-space-group test. Rotation battery (32 crystals, de-novo) is space-group-identical to before. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Jungfraujoch
Application to receive data from the PSI JUNGFRAU and EIGER detectors.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.