leonarski_fandClaude Opus 5
76395539fd
"Analyze dataset" cleared the stored cell and space group unless "Use the stored unit cell / space group" was ticked, and that checkbox defaulted off. But the settings panel writes the user's own cell and space group onto the experiment, so a cell typed into the panel was discarded too - while the checkbox label said "stored", implying it came from the file. It also contradicted the dialog next to it: "Refine geometry (stills)" is offered and default-ticked precisely because a cell is present, and the run then removed that cell. The default dialog state on a stills dataset with a known cell ran the bundle adjustment with nothing to anchor on and dropped indexing off ffbidx, which needs a cell, onto de-novo FFT. Drop the checkbox and take the crystal from the panel, which already has exactly the right semantics: "Unit cell known" ticked writes the cell and group, unticked clears both, and a space group of 0 means none. So ticked = -C/-S, unticked = bare rugnux, and what a run will use is always what is on screen. That also keeps the copied command line honest, since RugnuxCommandLine emits -C/-S from the same experiment. The panel is refilled from the file when one is opened, so a finished job's _process.h5 becoming the active snapshot now shows its group and can be cleared, instead of silently pinning every later run to it. Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
Jungfraujoch
Application to receive data from the PSI JUNGFRAU and EIGER detectors.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.