leonarski_fandClaude Opus 4.8
6c80dbdc32
The refined beam centre / detector rotations were written from the StartMessage at file open and then partially overwritten in Finalize - but the overwrite updated beam_center_x/y and rot1/2/3 and NOT the transformations/translation vector, which is what actually encodes the beam centre in the NXmx geometry chain read by XDS/DIALS/dxtbx. The reprocessed _process.h5 therefore had an internally inconsistent geometry (refined rotations combined with the stale, unrefined beam centre). The master file is never read before Finalize, so write the whole refinable geometry (beam_center_x/y + translation + rot1/2/3) once there, from the refined values when present and the StartMessage otherwise. This drops the open-time write plus in-place overwrite and, unlike the old path, keeps translation consistent with the refined beam centre. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Jungfraujoch
Application to receive data from the PSI JUNGFRAU and EIGER detectors.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.