leonarski_fandClaude Opus 5 6b713cf3da rugnux: size the written datasets by the ordinals reached, not by the successes
Each image is written at its own ordinal, so a frame that fails to load or analyse leaves
a HOLE - the frames after it keep their positions rather than shifting up. The end
message nevertheless reported the number of frames that SUCCEEDED as the image count,
and the writer sizes /entry/data/data and every per-image array from that.

So one failed frame in the middle of a run made the declared extent one short, and the
image it dropped was the LAST one written, not the one that failed. Two failures dropped
two, and so on: the file quietly ends before the data does, with the per-image metadata
still carrying rows for images the VDS no longer maps. It also under-counted the data
files when the run was split.

Track the highest ordinal actually written and use that. A hole then reads as the fill
value, which is what a frame that was never written should look like, and the counts of
collected and written images stay counts.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
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Jungfraujoch

Application to receive data from the PSI JUNGFRAU and EIGER detectors.

All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.

S
Description
Jungfraujoch Data Acquisition System
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