leonarski_f
680c36c20d
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* `rugnux --mode calibration` writes `<prefix>.json` beside the `.poni`, whose `dataset_settings` member is a `jfjoch_broker` `dataset_settings` body as it stands. * `rugnux` and `jfjoch_viewer` read PILATUS miniCBF sweeps natively, without conversion. * Masters written by other facilities open, including Eiger 1.x and third-party NXmx variants. * `rugnux` measures the beam centre on every run, and indexes with it when the file's value indexes nothing. * A detector swung out on a 2theta arm is placed where the file says it stands, and the calibration can hold the tilt fixed. * `rugnux` writes the unmerged MTZ by default, and a P1 merge beside it, so a wrong space group can be re-merged without reprocessing. * Significant improvements to symmetry handling in `rugnux`: the lattice, the point group, the setting and the systematic absences. * The `rugnux` report gives the resolution the CC1/2 fit reached, beside the range the reflections were written to. * The `rugnux` report gives the twinning statistics measured before the space group was decided, beside the ones measured after. * The `rugnux` report gives the strong-direction diffraction limit, and warns when CC1/2 is not monotone with resolution. * `rugnux` ranks screw axes on the evidence their absences carry, rather than on how many control reflections a candidate happens to have. * Twinning is no longer reported when the L-test contradicts it. * The `rugnux` report gives the detector tilt, the measured tilt and the direct beam beside the beam centre, and a post-refined beam centre is judged against the run's own measurement rather than the file's. * `--no-refine-tilt` holds the detector tilt at the value in the file, instead of zeroing it, when the calibration starts from the spots. * The `jfjoch_viewer` grid scan view draws the cells in the proportion of the scan steps, so the map has the shape of the scanned area. Reviewed-on: #76 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
36 lines
1.5 KiB
Markdown
36 lines
1.5 KiB
Markdown
# RotationAxis
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Definition of a crystal rotation axis
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## Properties
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Name | Type | Description | Notes
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------------ | ------------- | ------------- | -------------
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**name** | **str** | Name of rotation axis (e.g., omega, phi) | [optional] [default to 'omega']
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**step** | **float** | Angle step (per image) in degrees. 0 for an axis that does not turn: the axis then records the angle the spindle stood at, which is how a grid scan or a set of stills states its head position. |
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**start** | **float** | Start angle in degrees | [optional] [default to 0]
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**vector** | **List[float]** | Rotation axis |
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**helical_step_um** | **List[float]** | Translation (per image) for helical scan | [optional]
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**screening_wedge_deg** | **float** | Wedge angle value; used if rotation per image is smaller than increment between images (so particularly in screening) | [optional]
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## Example
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```python
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from jfjoch_client.models.rotation_axis import RotationAxis
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# TODO update the JSON string below
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json = "{}"
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# create an instance of RotationAxis from a JSON string
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rotation_axis_instance = RotationAxis.from_json(json)
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# print the JSON string representation of the object
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print(RotationAxis.to_json())
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# convert the object into a dict
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rotation_axis_dict = rotation_axis_instance.to_dict()
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# create an instance of RotationAxis from a dict
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rotation_axis_from_dict = RotationAxis.from_dict(rotation_axis_dict)
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```
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[[Back to Model list]](../README.md#documentation-for-models) [[Back to API list]](../README.md#documentation-for-api-endpoints) [[Back to README]](../README.md)
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