5d1ddccee8615b1184ba42278b3dcd59f1211625
Wire the recently-added stills knobs into jfjoch_viewer - they were reachable only from the rugnux CLI, and the viewer had silently diverged from the CLI once --refine-geometry became default-on for stills-with-cell. - Stills geometry-refinement two-pass (--refine-geometry): a checkbox + frame count in the reprocessing-job dialog, offered (and defaulted on, matching the CLI) only for a stills-with-cell run; wired into ProcessConfig and the "Copy command" generator (joined =N, or =off to reproduce opting out of the CLI default-on). - Stills partiality (--still-partiality) checkbox in Bragg integration and the partiality-uncertainty merge term (--partiality-uncertainty) in Scaling, both mirrored in the command-line generator. Rename the "best per-image refinement" mode from "multi" to "flex" everywhere: GeomRefinementAlgorithmEnum::Flex, CLI -r flex (with "multi" kept as a hidden back-compat alias), OpenAPI enum "Flex" + regenerated C++/TS clients, viewer combo, frontend dropdown, and the stored HDF5 string. "multi" collides with CrystFEL's multi-lattice sense; "flex" = let the pipeline decide. The API now carries a dedicated Flex value instead of masquerading as BeamCenter. Also fix a pre-existing bug in Convert(IndexingSettings): OrientationOnly was missing from the outbound switch and serialized as an invalid API value. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Jungfraujoch
Application to receive data from the PSI JUNGFRAU and EIGER detectors.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.
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