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battery: cross-platform timing report for rc175 3be5dcaac - the timing benchmark on six platforms

tools/battery/results/timing_platforms/: the timing benchmark (myob and cytochrome C from AlphaFold DB
models, 4nwv from a moved deposited model, all placed by molecular replacement) on the workstation
(RTX 5080, and CPU only), the 4x T4 server, GB10, an 8 GB Windows laptop and a Mac mini M6: Table 1 wall
time for the three sets, Tables 2-4 time per pipeline stage (the workflow figure's boxes) with the sum of
steps against the wall time, and per platform the commit, build, command, hardware and conditions as
recorded. All checks pass everywhere with the same MR decisions. Generated by timing_table.py from
platforms.json (the packs it reads are kept outside the repository).

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01PXc1zD1yxHqaR1DGdCTHL4

2026-10-16 12:04:44 +02:00

.gitea/workflows

Metal Bragg integration engine on macOS, output unchanged (bit-identical to the CPU engine)

2026-10-14 23:18:42 +02:00

acquisition_device

v1.0.0.rc-161 (#71 )

2026-08-13 17:03:10 +02:00

broker

Broker: log why a DECTRIS run ends in a detector error, reuse one SIMPLON connection

2026-10-08 22:45:42 +02:00

common

Merge gpumem-run round 2 into rc175: FFT indexer transforms 4096 directions at a time (a third of its card memory), first-pass and pre-scan GPU workers sized from the card, single-indexer probes on a small card, beam-centre point transforms with two spectra and one work area; output unchanged

2026-10-15 17:26:32 +02:00

compression

CBF byte-offset decoder: plain stores instead of SSE streaming stores

2026-10-13 07:54:56 +02:00

detector_control

DectrisSimplonClient: separate connections for commands and status reads

2026-10-08 22:53:01 +02:00

docker

1.0.0-rc.174 (#84 )

2026-10-06 14:03:18 +02:00

docs

battery.py on Windows: relative site-config paths from the config's directory, a copied pdb_cache usable as is, Windows hardware info

2026-10-16 08:33:45 +02:00

etc

v1.0.0-rc.166 (#76 )

2026-09-02 21:17:31 +02:00

fpga

1.0.0-rc.175

2026-10-07 14:14:39 +02:00

frame_serialize

v1.0.0-rc.173 (#83 )

2026-09-29 15:57:32 +02:00

frontend

1.0.0-rc.175

2026-10-07 14:14:39 +02:00

gemmi_gph

gemmi dencalc: an atom whose density at the starting radius is exactly the cutoff gets a radius, not NaN

2026-10-13 14:28:51 +02:00

image_analysis

Merge host-mem into rc175: the merge's working arrays handed back before the space-group search and after the all-observation merge, post-refinement frees its gather before the fit; output unchanged

2026-10-15 23:13:40 +02:00

image_puller

ZeroMQ puller: the message region without a ring takes the message's read-only bytes

2026-10-13 13:17:48 +02:00

image_pusher

ZeroMQ pusher: say so when a stalled writer switches the socket to dropping

2026-10-13 12:51:34 +02:00

include

v1.0.0-rc.133

2026-03-26 20:50:33 +01:00

jungfrau

v1.0.0-rc.153 (#63 )

2026-06-23 20:29:49 +02:00

licenses

battery.py timing: a three-set benchmark placed by molecular replacement, checked and timed per step

2026-10-15 09:01:46 +02:00

preview

Thread count from the CPUs the process may use, not the machine's

2026-10-08 11:15:29 +02:00

reader

marCCD frames are widened on the device

2026-10-12 22:37:47 +02:00

receiver

receiver: allow 30 s instead of 10 s for the image pusher to return its buffers after END

2026-10-13 19:57:15 +02:00

rugnux

Merge host-mem into rc175: the merge's working arrays handed back before the space-group search and after the all-observation merge, post-refinement frees its gather before the fit; output unchanged

2026-10-15 23:13:40 +02:00

tests

Beam-centre FFT capture: the 1D line-mirror surfaces removed, as nothing ever read them

2026-10-15 22:48:01 +02:00

tools

battery: cross-platform timing report for rc175 3be5dcaac - the timing benchmark on six platforms

2026-10-16 12:04:44 +02:00

viewer

Viewer: a run's results shown leave "Known unit cell" unticked too

2026-10-15 16:58:38 +02:00

writer

Writer: CloseOldFiles walks the open data files, not every file slot of the run

2026-10-13 12:51:34 +02:00

xds-plugin

XDS plugin 1.1.0: mask module/chip edges, pass saturation through; recommend Durin

2026-10-08 10:56:34 +02:00

.gitattributes

v1.0.0-rc.153 (#63 )

2026-06-23 20:29:49 +02:00

.gitignore

battery.py timing: a three-set benchmark placed by molecular replacement, checked and timed per step

2026-10-15 09:01:46 +02:00

.readthedocs.yaml

version 1.0.0-rc.25

2024-11-22 21:25:20 +01:00

CLAUDE.md

rugnux -X FFT is the algorithm: cuFFT on a GPU, FFTW without one; -X cuFFT names the GPU implementation

2026-10-14 10:13:23 +02:00

CMakeLists.txt

Metal Bragg integration engine on macOS, output unchanged (bit-identical to the CPU engine)

2026-10-14 23:18:42 +02:00

CONTRIBUTING.md

version 1.0.0-rc.27

2024-12-02 21:17:14 +01:00

gen_python_client.sh

v1.0.0.rc-161 (#71 )

2026-08-13 17:03:10 +02:00

gitea_create_release.py

v1.0.0-rc.94

2025-10-25 22:05:47 +02:00

gitea_upload_file.py

v1.0.0-rc.156 (#66 )

2026-07-03 19:18:56 +02:00

LICENSE

XDS plugin 1.1.0: mask module/chip edges, pass saturation through; recommend Durin

2026-10-08 10:56:34 +02:00

make_doc.sh

v1.0.0.rc-161 (#71 )

2026-08-13 17:03:10 +02:00

README.md

1.0.0-rc.174 (#84 )

2026-10-06 14:03:18 +02:00

rugnux_anomalous.py

v1.0.0.rc-162 (#72 )

2026-08-25 08:21:39 +02:00

rugnux_stills_ab.py

v1.0.0-rc.172 (#82 )

2026-09-22 06:48:37 +02:00

stills_datasets.tsv

v1.0.0-rc.164 (#74 )

2026-08-26 22:47:00 +02:00

THIRD_PARTY_NOTICES.md

battery.py timing: a three-set benchmark placed by molecular replacement, checked and timed per step

2026-10-15 09:01:46 +02:00

update_version.sh

XDS plugin: GPL linking permission, own tgz with its notices, macOS build; one portable CI build

2026-10-07 20:29:19 +02:00

VERSION

1.0.0-rc.175

2026-10-07 14:14:39 +02:00

README.md

Jungfraujoch

Application to receive and analyse data from the PSI JUNGFRAU and EIGER detectors, together with rugnux, its program for processing stored diffraction data - rotation and serial, macromolecular and small-molecule - from images to merged reflections.

All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.