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This is an UNSTABLE release. It includes many experimental features, as well as many AI generated fixes. We recommend using rc.152 for production use. * jfjoch_process: Major rotation (rot3d) data processing overhaul - robust profile-fit integration, Cauchy-loss scaling with optional absorption surface, de-novo indexing and space-group/centering determination fixes, and merging statistics + ISa in the mmCIF output. * jfjoch_process: Add EXPERIMENTAL ice-ring detection (--detect-ice-rings) that excludes ice reflections from scaling. * Compression: Add BSHUF_ZSTD_RLE_HUFF, make compression size-aware (drop frames that don't fit rather than aborting), and add the jfjoch_recompress tool. * jfjoch_viewer: Report "Multiple lattices detected" and grey out "Analyze dataset" on a live connection. * jfjoch_broker: Write smargon chi/phi goniometer positions to NXmx; read sensor thickness/material from HDF5 metadata. * CI: Build Windows (CUDA and non-CUDA) installers.Reviewed-on: #66 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
49 lines
1.4 KiB
C++
49 lines
1.4 KiB
C++
// SPDX-FileCopyrightText: 2025 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
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// SPDX-License-Identifier: GPL-3.0-only
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#pragma once
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#include <cstdint>
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#include <optional>
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#include <cmath>
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#include "SpotToSave.h"
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struct Reflection {
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int32_t h;
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int32_t k;
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int32_t l;
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float image_number; // Can be in-between for 3D integration
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float delta_phi_deg; // phi angle from XDS - difference from middle of current frame (NOT an absolute angle)
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float predicted_x;
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float predicted_y;
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float observed_x;
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float observed_y;
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float d;
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float I;
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float bkg;
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float sigma;
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float dist_ewald;
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float rlp;
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float partiality; // fraction of the reflection recorded in the sampled (rocking) slice
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float completeness = 1.0f; // fraction of the spot footprint on live pixels (1 = not clipped by edge/gap/mask)
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float zeta;
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float image_scale_corr; // I_true = scaling_correction * I; scaling_correction = rlp / (partiality * image_scale)
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bool observed = false;
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bool on_ice_ring = false; // sits on a hexagonal-ice powder ring: excluded from scaling, kept for merging
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};
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struct MergedReflection {
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int32_t h = 0;
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int32_t k = 0;
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int32_t l = 0;
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float I = NAN;
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float sigma = NAN;
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float I_half[2] = {NAN, NAN};
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float sigma_half[2] = {NAN, NAN};
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float d = 0.0;
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bool rfree_flag = false;
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};
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