leonarski_f
3d382ce0a0
A slot builder thread that throws (gemmi's topology or hydrogen placement, bad_alloc) would call std::terminate - rugnux or the broker gone. The slot is now left out as one the card cannot take is, with a warning, and MakeOwnSlot's GPU engine catches std::exception, not only JFJochException. Both callers of RefineModel (after the merge, and --mode refine) catch std::exception: the refinement is reported NOT_PERFORMED with "refinement failed: <what>" and the run writes everything else (cell e.s.d.s, unmerged MTZ, report), as the refinement is processing-inert. Test: --mode refine on a cell too large for the bulk-solvent grid comes back with REFINE= NOT_PERFORMED and the reason, not an exception. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_015CeEGgpKdfkCTJb3YNMJcu (cherry picked from commit dc4e99fe4b3da2a9a3fa4290b5f70bfcc8c7bdb8)
Jungfraujoch
Application to receive and analyse data from the PSI JUNGFRAU and EIGER detectors, together with
rugnux, its program for processing stored diffraction data - rotation and serial, macromolecular
and small-molecule - from images to merged reflections.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.