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leonarski_fandClaude Opus 5.5 280ff0a4a0 rugnux: remove --estimate-beam-center and the spot-symmetry beam-centre estimator 
--estimate-beam-center was opt-in, off by default and used by no battery run. Removed with it: the
half-turn spot-symmetry estimator (image_analysis/geom_refinement/BeamCenterFromSpots and its tests,
used nowhere else), its pre-scan branch and paired-frame sample, the sparse-sweep extra reads, the
BEAM_CENTER_* constants used only there, beam_center_placed_, the spindle fit that only ran inside
it (--fit-spindle / --no-fit-spindle, ProcessConfig::fit_spindle; its estimate was only logged),
the viewer's "Measure beam centre before indexing" job option and the RugnuxCommandLine emission.

The background centre (FindBeamCenter on the pre-scan projection), the asynchronous beam-centre
capture, the beam-centre check that indexes at both centres and the measured centre's bound on the
post-refinement are unchanged, and so is the pre-scan sample for the shadow, the defective pixels
and the spot width. Warnings that pointed at --estimate-beam-center now point at --beam-x/--beam-y.

Co-Authored-By: Claude Opus 5.5 (1M context) <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01SVmAWnzCmRKAXVUCdc4iNi
2026-10-07 12:35:40 +02:00
..
crystfel
v1.0.0.rc-161 (#71)
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data
v1.0.0-rc.173 (#83)
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test_data
v1.0.0-rc.160 (#70)
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xds
v1.0.0-rc.134 (#43)
2026-04-09 13:30:47 +02:00
xds_durin
version 1.0.0-rc.13
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xds_neggia
version 1.0.0-rc.13
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AcquisitionCountersTest.cpp
v1.0.0-rc.36
2025-05-05 19:32:22 +02:00
AdaptiveSpotFinderCPUTest.cpp
v1.0.0-rc.173 (#83)
2026-09-29 15:57:32 +02:00
AdaptiveSpotFinderGPUTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
AdaptiveThresholdTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
AnisotropyAnalysisTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
AutoIncrVectorTest.cpp
v1.0.0-rc.139 (#49)
2026-04-29 09:50:50 +02:00
AzimuthalIntegrationTest.cpp
v1.0.0-rc.173 (#83)
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BandwidthEstimateTest.cpp
v1.0.0-rc.173 (#83)
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BeamCenterFFTGPUTest.cpp
v1.0.0-rc.169 (#79)
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BeamCenterFFTTest.cpp
v1.0.0-rc.169 (#79)
2026-09-15 17:09:31 +02:00
BeamCenterFromBackgroundTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
BearerTokensTest.cpp
v1.0.0-rc.173 (#83)
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BraggIntegrationEngineCompressedImageTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
BraggIntegrationEngineCPUTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
BraggIntegrationEngineGPUTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
BraggStencilTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
BrokerHttpAuthTest.cpp
v1.0.0-rc.173 (#83)
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BSLZ4DecoderGPUFuzzTest.cpp
v1.0.0.rc-161 (#71)
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BSLZ4DecoderGPUTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
CalcBraggPredictionTest.cpp
v1.0.0-rc.173 (#83)
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CalibrationTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
CBORTest.cpp
v1.0.0-rc.173 (#83)
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CCTest.cpp
v1.0.0-rc.146 (#56)
2026-05-28 18:48:35 +02:00
CheckImageOutput.h
v1.0.0-rc.36
2025-05-05 19:32:22 +02:00
CMakeLists.txt
rugnux: remove --estimate-beam-center and the spot-symmetry beam-centre estimator
2026-10-07 12:35:40 +02:00
CoordTest.cpp
v1.0.0-rc.41
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CorrectionSurfaceGPUTest.cpp
1.0.0-rc.174 (#84)
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CrystalLatticeTest.cpp
v1.0.0-rc.166 (#76)
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CrystalSettingTest.cpp
v1.0.0-rc.173 (#83)
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CudaHandledErrorTest.cpp
v1.0.0-rc.172 (#82)
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CUDAMemHelpersTest.cpp
v1.0.0-rc.173 (#83)
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DetectorGeometryTest.cpp
v1.0.0-rc.103 (#8)
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DetectorSettingsTest.cpp
v1.0.0-rc.139 (#49)
2026-04-29 09:50:50 +02:00
DetectorSetupTest.cpp
v1.0.0.rc-162 (#72)
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DetGeomCalibTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
DiagnosticOutputTest.cpp
v1.0.0-rc.172 (#82)
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DiffractionExperimentTest.cpp
v1.0.0-rc.166 (#76)
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DiffractionGeometryTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
DiffractionSpotTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
enospc_shim.c
SHIM library improvements from the HDF Group
2026-05-08 11:39:51 +02:00
FPGAFrameGeneratorTest.cpp
version 1.0.0-rc.25
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FPGAHLSModulesTest.cpp
v1.0.0-rc.91
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FPGAHostWriterTest.cpp
v1.0.0-rc.34
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FPGAIntegrationTest.cpp
v1.0.0-rc.97
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FPGANetworkTest.cpp
v1.0.0-rc.72
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FPGAPTPTest.cpp
v1.0.0-rc.72
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FPGASpotFindingUnitTest.cpp
v.1.0.0-rc.32
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FrameTransformationTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
FrenchWilsonTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
GoniometerAxisTest.cpp
v1.0.0-rc49
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GridScanSettingsTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
HDF5WritingTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
HistogramTest.cpp
v1.0.0-rc.121 (#28)
2025-12-12 21:24:20 +01:00
HKLKeyTest.cpp
v1.0.0-rc.124 (#31)
2026-02-01 13:29:33 +01:00
HotPixelFinderTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
ImageBufferTest.cpp
v1.0.0-rc.128 (#35)
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ImageMetadataTest.cpp
v1.0.0-rc.103 (#8)
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ImagePreprocessorGPUFusedTest.cpp
v1.0.0.rc-162 (#72)
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ImageSpotFinderCPUTest.cpp
v1.0.0-rc.173 (#83)
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ImageSpotFinderGPUTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
IndexingUnitTest.cpp
v1.0.0-rc.173 (#83)
2026-09-29 15:57:32 +02:00
JFCalibrationTest.cpp
v1.0.0-rc.36
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JFConversionTest.cpp
version 1.0.0-rc.25
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jfjoch_hdf5_enospc_test.cpp
v1.0.0.rc-162 (#72)
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JFJochReaderTest.cpp
1.0.0-rc.174 (#84)
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JFJochReceiverIntegrationTest.cpp
v1.0.0-rc.150 (#60)
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JFJochReceiverLiteTest.cpp
v1.0.0-rc.173 (#83)
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JFJochReceiverPlotsTest.cpp
v1.0.0-rc.153 (#63)
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JFJochReceiverProcessingTest.cpp
v1.0.0-rc.160 (#70)
2026-07-19 09:39:28 +02:00
JFJochStateMachineTest.cpp
v1.0.0-rc.169 (#79)
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JFPedestalTest.cpp
version 1.0.0-rc.25
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JPEGTest.cpp
v1.0.0-rc.173 (#83)
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LatticeReductionTest.cpp
v1.0.0-rc.153 (#63)
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LatticeSearchTest.cpp
v1.0.0-rc.173 (#83)
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LePageLatticeTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
LoadReferenceMtzFreeFlagsTest.cpp
v1.0.0-rc.173 (#83)
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LoadReferenceSfCifTest.cpp
v1.0.0-rc.173 (#83)
2026-09-29 15:57:32 +02:00
LossyFilterTest.cpp
version 1.0.0-rc.25
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MergeScaleTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
ModelMaskGPUTest.cpp
v1.0.0-rc.173 (#83)
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ModelScaleGPUTest.cpp
1.0.0-rc.174 (#84)
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ModelScalingTest.cpp
v1.0.0-rc.172 (#82)
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ModelValidationTest.cpp
v1.0.0-rc.173 (#83)
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ModuleSummationTest.cpp
version 1.0.0-rc.27 minor fixes
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MovingAverageTest.cpp
v1.0.0-rc.31
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MultiLatticeSearchTest.cpp
v1.0.0-rc.148 (#58)
2026-06-08 08:30:35 +02:00
nxmx_geometry_dials_test.py
v1.0.0.rc-162 (#72)
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ParallelForTest.cpp
v1.0.0-rc.173 (#83)
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PedestalCalcTest.cpp
v1.0.0-rc.97
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PixelMaskTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
PortableTest.cpp
v1.0.0-rc.173 (#83)
2026-09-29 15:57:32 +02:00
PostRefineTest.cpp
v1.0.0-rc.173 (#83)
2026-09-29 15:57:32 +02:00
PreflightTest.cpp
v1.0.0-rc.165 (#75)
2026-08-27 22:16:54 +02:00
PreviewCounterTest.cpp
version 1.0.0-rc.25
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RawToConvertedGeometryTest.cpp
v1.0.0-rc.97
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RegressionTest.cpp
1.0.0-rc.89
2025-10-01 22:54:40 +02:00
ReindexAmbiguityTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
ResolutionShellsTest.cpp
v1.0.0-rc.166 (#76)
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ResultReportTest.cpp
1.0.0-rc.174 (#84)
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RfreeFlagsTest.cpp
v1.0.0-rc.172 (#82)
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RingsFromProfileTest.cpp
v1.0.0-rc.166 (#76)
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ROIIntegrationCPUTest.cpp
v1.0.0-rc.153 (#63)
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ROIIntegrationGPUTest.cpp
v1.0.0-rc.153 (#63)
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ROIMapTest.cpp
v1.0.0-rc.153 (#63)
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RotationIndexerTest.cpp
v1.0.0-rc.173 (#83)
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RotationScaleWalkTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
RugnuxLargeTest.cpp
v1.0.0-rc.173 (#83)
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RugnuxTest.cpp
v1.0.0-rc.173 (#83)
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SearchSpaceGroupTest.cpp
1.0.0-rc.174 (#84)
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SearchSpaceGroupTwinTest.cpp
v1.0.0-rc.169 (#79)
2026-09-15 17:09:31 +02:00
ShadowFinderTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
SphericalHarmonicSurfaceTest.cpp
v1.0.0-rc.173 (#83)
2026-09-29 15:57:32 +02:00
SpindleBlindFractionTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
SpindleCuspLossTest.cpp
v1.0.0-rc.167 (#77)
2026-09-09 07:25:13 +02:00
SpotExtractorGPUParityTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
SpotFootprintTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
SpotUtilsTest.cpp
v1.0.0-rc.173 (#83)
2026-09-29 15:57:32 +02:00
StatusVectorTest.cpp
v1.0.0-rc.127 (#34)
2026-03-02 15:57:12 +01:00
StreamWriterTest.cpp
v1.0.0-rc.97
2025-11-09 12:42:27 +01:00
StrongPixelSetTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
SweepLayoutTest.cpp
v1.0.0-rc.173 (#83)
2026-09-29 15:57:32 +02:00
SyntheticMergedReflections.h
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
TCPImagePusherTest.cpp
v1.0.0-rc.157 (#67)
2026-07-11 07:19:11 +02:00
TestData.h
v1.0.0-rc.153 (#63)
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ThreadSafeFIFOSetTest.cpp
v1.0.0-rc.135 (#44)
2026-04-16 11:59:59 +02:00
TIFFTest.cpp
v1.0.0-rc.153 (#63)
2026-06-23 20:29:49 +02:00
TimeTest.cpp
v1.0.0-rc.96 (#1)
2025-11-02 13:45:57 +01:00
TopPixelsTest.cpp
v1.0.0-rc.121 (#28)
2025-12-12 21:24:20 +01:00
TranslationalNCSTest.cpp
v1.0.0-rc.172 (#82)
2026-09-22 06:48:37 +02:00
TwinningAnalysisTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
UnitCellTest.cpp
v1.0.0-rc.146 (#56)
2026-05-28 18:48:35 +02:00
WilsonOutliersTest.cpp
v1.0.0-rc.173 (#83)
2026-09-29 15:57:32 +02:00
WriteReflectionsTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
XDSPluginTest.cpp
v1.0.0.rc-161 (#71)
2026-08-13 17:03:10 +02:00
XtalOptimizerTest.cpp
v1.0.0-rc.166 (#76)
2026-09-02 21:17:31 +02:00
XtalRefineCeres.h
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
XtalRefineTest.cpp
1.0.0-rc.174 (#84)
2026-10-06 14:03:18 +02:00
ZMQImagePusherTest.cpp
v1.0.0-rc.169 (#79)
2026-09-15 17:09:31 +02:00
ZMQMetadataSocketTest.cpp
v1.0.0-rc.133
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ZMQPreviewSocketTest.cpp
version 1.0.0-rc.25
2024-11-22 21:25:20 +01:00
ZSTDCompressorTest.cpp
v1.0.0-rc.173 (#83)
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