leonarski_fandClaude Opus 5.5
0cf62452cd
Saturation clips the strongest spots, and those are at low resolution. On a Rayonix stills set the saturated pixels sat almost entirely past 4 A (0.002% of the reflections coarser than 4 A against 0.59% overall) - flagged or hot pixels, not clipped spots - and keeping those observations as lower bounds put the saturation limit into high-resolution intensities: R_split 0.12 -> 0.93, CC1/2 0.99 -> 0.33. The run now keeps overloads only where their share coarser than 4 A is at least 1.5x their overall share; otherwise they are flagged and dropped as before, with a log line saying so. On clipped CCD stills the share coarser than 4 A is 2.6-5.9x the overall one and nothing changes (R_split and R_free identical); on the Rayonix set R_split returns to 0.12. A pragmatic gate until saturation is told from bad pixels per spot. Rotation never keeps overloads and is unaffected. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_015CeEGgpKdfkCTJb3YNMJcu
Jungfraujoch
Application to receive and analyse data from the PSI JUNGFRAU and EIGER detectors, together with
rugnux, its program for processing stored diffraction data - rotation and serial, macromolecular
and small-molecule - from images to merged reflections.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.