leonarski_fandClaude Opus 5.5
07a43a13eb
The first stills battery of e8145d8 lost on one Rayonix set (lcls242_s, dimple R_free 0.2302 ->
0.2323): there the whole-frame radial correction hurts. On 40,000 of its frames: battery default
0.2462, ring 12 with the correction 0.2444, ring 12 without it 0.2336, ring 14 with it 0.2467. Its
beam is strongly polarised and the azimuthally averaged ring background does not describe the local
background.
So the empty apertures now also carry the corrected difference: the frame's ring background
(RingBackground, factored out of the engine) averaged over the ring pixels minus over the disk pixels
- what the integrator's kernel takes off a reflection - is subtracted from each disk-minus-ring
difference. The ring is still chosen on the plain differences, so its reach does not rest on the
radial model; where the correction was left to auto it is then kept only if it makes that ring predict
the disk better. Decisions on 15-60 pre-scan frames:
pal86 ring 10, correction on (240.6 -> 221.1) lcls222 ring 10, on (6.34e4 -> 3.41e4)
lcls242_s ring 12, off (277.2 -> 285.8) alvra213_int16 ring 14, on (0.01424 -> 0.01422)
Choosing ring and correction jointly instead picked ring 14 with the correction on lcls222, where dimple
reads 0.204 against 0.196 at ring 10; a median instead of the mean square picked ring 14 with the
correction on lcls242_s, the worst arm there. The sequential rule is the one that agrees with dimple on
every set measured.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_015CeEGgpKdfkCTJb3YNMJcu
Jungfraujoch
Application to receive and analyse data from the PSI JUNGFRAU and EIGER detectors, together with
rugnux, its program for processing stored diffraction data - rotation and serial, macromolecular
and small-molecule - from images to merged reflections.
All documentation is now placed in docs/ subdirectory and for the current version hosted on Jungfraujoch Read The Docs page.