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* Rugnux: Several rotation sweeps of one crystal are merged as one dataset (`rugnux a_master.h5 b_master.h5`), on a common indexing and cell, with a non-isomorphous sweep left out and reported; `--sweeps separate` processes each sweep on its own. Bruker `.sfrm` frames and imgCIF files with a full goniometer axis chain are read. * Rugnux: More robust rotation processing - a retry with a more sensitive spot finder when no lattice is found, a self-consistent detector distance, long axes and doubled cells tested as hypotheses, a `-C` supercell multiple stepped down, and each ice ring merged, down-weighted or rejected on its own. * Rugnux: Serial stills are merged with a partiality-aware error model, reported as `ERROR_MODEL_A/B/C` with no ISa or R_merge/R_meas/R_pim; runs without `-S` have an overall intensity scale about 0.86-0.88 times that of earlier versions, with unchanged statistics. A second crystal form is left out of the merge and reported, the indexing ambiguity is resolved more reliably, and `--model` no longer influences processing. * Rugnux: The reported CC1/2 is the standard unweighted one, which can be lower than before on sweeps with weak frames; ISa comes with a 95% interval (`ISA_LOW`/`ISA_HIGH`). * Rugnux: Model refinement adds anisotropic/TLS, local NCS and twin refinement where R-free supports them; building waters and relabelling ions is now off by default (`--refine-solvent` turns it on). * NXmx: A detector of several modules is written as `module_0` ... `module_N` only, so DIALS reads each module as its own panel. * Other: JPEG previews use a bundled encoder (libjpeg-turbo no longer needed), Rugnux prints how to cite it, and the release archives contain the HTML documentation. Reviewed-on: #92 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch>
108 lines
2.7 KiB
C++
108 lines
2.7 KiB
C++
// SPDX-FileCopyrightText: 2026 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
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// SPDX-License-Identifier: GPL-3.0-only
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#include "HostMemory.h"
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#include <algorithm>
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#if defined(_WIN32)
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#ifndef NOMINMAX
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#define NOMINMAX
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#endif
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#include <windows.h>
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#elif defined(__APPLE__)
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#include <cstdint>
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#include <sys/types.h>
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#include <sys/sysctl.h>
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#else
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#include <unistd.h>
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#endif
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size_t get_host_total_memory() {
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#if defined(_WIN32)
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MEMORYSTATUSEX status{};
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status.dwLength = sizeof(status);
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if (!GlobalMemoryStatusEx(&status))
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return 0;
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return static_cast<size_t>(status.ullTotalPhys);
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#elif defined(__APPLE__)
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uint64_t bytes = 0;
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size_t len = sizeof(bytes);
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if (sysctlbyname("hw.memsize", &bytes, &len, nullptr, 0) != 0)
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return 0;
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return static_cast<size_t>(bytes);
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#else
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const long pages = sysconf(_SC_PHYS_PAGES), page = sysconf(_SC_PAGE_SIZE);
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if (pages <= 0 || page <= 0)
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return 0;
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return static_cast<size_t>(pages) * static_cast<size_t>(page);
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#endif
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}
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size_t DefaultHostMemoryBudget() {
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return static_cast<size_t>(HOST_MEMORY_BUDGET_FRACTION * static_cast<double>(get_host_total_memory()));
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}
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HostWorkerPool &HostWorkerPool::Instance() {
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static HostWorkerPool pool;
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return pool;
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}
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HostWorkerPool::HostWorkerPool() {
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SetBudget(0);
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SetSize(0);
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}
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void HostWorkerPool::SetSize(size_t bytes) {
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std::lock_guard lock(m);
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size = bytes > 0 ? bytes
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: static_cast<size_t>(HOST_WORKER_POOL_FRACTION * static_cast<double>(DefaultHostMemoryBudget()));
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cv.notify_all();
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}
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void HostWorkerPool::SetBudget(size_t bytes) {
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std::lock_guard lock(m);
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budget = bytes > 0 ? bytes : DefaultHostMemoryBudget();
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cv.notify_all();
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}
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size_t HostWorkerPool::available() const {
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return std::min(size, budget > held ? budget - held : 0);
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}
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size_t HostWorkerPool::Size() {
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std::lock_guard lock(m);
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return available();
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}
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HostWorkerPool::Reservation::Reservation(HostWorkerPool &pool, size_t bytes) : pool(pool), bytes(bytes) {
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std::unique_lock lock(pool.m);
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pool.cv.wait(lock, [&] { return pool.reserved == 0 || pool.reserved + bytes <= pool.available(); });
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pool.reserved += bytes;
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}
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HostWorkerPool::Reservation::~Reservation() {
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{
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std::lock_guard lock(pool.m);
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pool.reserved -= bytes;
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}
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pool.cv.notify_all();
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}
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HostWorkerPool::Held::Held(HostWorkerPool &pool, size_t bytes) : pool(pool), bytes(0) {
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Set(bytes);
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}
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HostWorkerPool::Held::~Held() {
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Set(0);
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}
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void HostWorkerPool::Held::Set(size_t new_bytes) {
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{
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std::lock_guard lock(pool.m);
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pool.held = pool.held - bytes + new_bytes;
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bytes = new_bytes;
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}
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pool.cv.notify_all();
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}
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