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This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144. * jfjoch_broker: Improve azimuthal integration (add <I^2> calculation) * jfjoch_broker: Fixes around indexing, aiming to handle multi-lattice crystals (work in progress, it is not fully integrated) * jfjoch_writer: Save mean(I), stddev(I), and count(I) for each azimuthal bin Reviewed-on: #58
56 lines
2.0 KiB
C++
56 lines
2.0 KiB
C++
// SPDX-FileCopyrightText: 2025 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
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// SPDX-License-Identifier: GPL-3.0-only
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#pragma once
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#include <limits>
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#include <type_traits>
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#include "AzIntEngine.h"
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class AzIntEngineCPU : public AzIntEngine {
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public:
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// image is anything that can be referenced with operator[]
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template <class T>
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void RunAzint(const T &image, AzimuthalIntegrationProfile &profile) {
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for (int i = 0; i < azint_count.size(); i++) {
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azint_sum[i] = 0.0f;
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azint_sum2[i] = 0.0f;
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azint_count[i] = 0;
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}
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if (image.size() != npixel)
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throw std::runtime_error("ImageSpotFinder::AzimIntegration: Mismatch in size");
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const uint16_t *pixel_to_bin = integration.GetPixelToBin().data();
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const float *corrections = integration.Corrections().data();
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using pixel_t = std::remove_cv_t<std::remove_reference_t<decltype(image[0])>>;
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for (int i = 0; i < image.size(); i++) {
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const pixel_t v = image[i];
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// saturated pixels use the type's max value; for signed types
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// masked/bad pixels additionally use the min value
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if (v == std::numeric_limits<pixel_t>::max())
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continue;
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if constexpr (std::is_signed_v<pixel_t>) {
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if (v == std::numeric_limits<pixel_t>::min())
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continue;
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}
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const float val = static_cast<float>(v) * corrections[i];
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const float val_sq = val * val;
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const uint16_t bin = pixel_to_bin[i];
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if (bin < azint_bins) {
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azint_sum[bin] += val;
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azint_sum2[bin] += val_sq;
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++azint_count[bin];
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}
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}
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profile.Clear(integration);
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profile.Add(azint_sum, azint_sum2, azint_count);
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}
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AzIntEngineCPU(const AzimuthalIntegrationMapping& integration);
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void Run(const ImagePreprocessorBuffer &image, AzimuthalIntegrationProfile &profile) override;
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}; |