leonarski_f
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This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144. * jfjoch_broker: Improve azimuthal integration (add <I^2> calculation) * jfjoch_broker: Fixes around indexing, aiming to handle multi-lattice crystals (work in progress, it is not fully integrated) * jfjoch_writer: Save mean(I), stddev(I), and count(I) for each azimuthal bin Reviewed-on: #58
56 lines
2.2 KiB
C++
56 lines
2.2 KiB
C++
// SPDX-FileCopyrightText: 2024 Filip Leonarski, Paul Scherrer Institute <filip.leonarski@psi.ch>
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// SPDX-License-Identifier: GPL-3.0-only
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#pragma once
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#include "DetectorSetup.h"
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#include "DiffractionExperiment.h"
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#include "../jungfrau/JFCalibration.h"
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struct PixelMaskStatistics {
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uint32_t user_mask;
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uint32_t noisy_pixel;
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uint32_t error_pixel;
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uint32_t chip_gap_pixel;
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uint32_t total_masked;
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uint32_t module_gap_pixel;
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};
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class PixelMask {
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std::vector<uint32_t> mask;
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std::vector<uint32_t> raw_mask;
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uint32_t LoadMask(const std::vector<uint32_t>& mask, uint8_t bit);
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void UpdateRawMask(const DiffractionExperiment& experiment);
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void CalcEdgePixels_i(const DiffractionExperiment& experiment);
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public:
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// NXmx bits
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constexpr static const uint8_t ModuleGapPixelBit = 0;
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constexpr static const uint8_t ErrorPixelBit = 1;
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constexpr static const uint8_t NoisyPixelBit = 4;
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constexpr static const uint8_t UserMaskedPixelBit = 8;
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constexpr static const uint8_t ChipGapPixelBit = 31;
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constexpr static const uint8_t ModuleEdgePixelBit = 30;
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PixelMask();
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explicit PixelMask(size_t width, size_t height);
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explicit PixelMask(const DiffractionExperiment& experiment);
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explicit PixelMask(const std::vector<uint32_t> &mask);
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void CalcEdgePixels(const DiffractionExperiment& experiment);
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void LoadUserMask(const DiffractionExperiment& experiment, const std::vector<uint32_t>& mask);
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void LoadDECTRISBadPixelMask(const std::vector<uint32_t>& mask);
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void LoadDarkBadPixelMask(const DiffractionExperiment& experiment, const std::vector<uint32_t>& mask);
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void LoadDetectorBadPixelMask(const DiffractionExperiment& experiment, const JFCalibration *calib);
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[[nodiscard]] const std::vector<uint32_t> &GetMaskRaw() const;
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[[nodiscard]] const std::vector<uint32_t> &GetMask(const DiffractionExperiment& experiment) const;
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[[nodiscard]] const std::vector<uint32_t> &GetMask() const;
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[[nodiscard]] std::vector<uint32_t> GetUserMask(const DiffractionExperiment& experiment) const;
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[[nodiscard]] std::vector<uint32_t> GetUserMask() const;
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[[nodiscard]] PixelMaskStatistics GetStatistics() const;
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};
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