v1.0.0-rc.112 #18

Merged

leonarski_f merged 37 commits from 2511-1.0.0-rc.112 into main

2025-11-30 17:39:23 +01:00

Author	SHA1	Message	Date
Filip Leonarski	16a6d9f309	CHANGELOG: Collapse all prior rc versions under 1.0.0 Some checks failed Build Packages / build:rpm (ubuntu2204_nocuda) (push) Successful in 12m39s Details Build Packages / build:rpm (ubuntu2404_nocuda) (push) Successful in 12m43s Details Build Packages / build:rpm (rocky8_nocuda) (push) Successful in 12m54s Details Build Packages / Generate python client (push) Successful in 16s Details Build Packages / build:rpm (rocky8) (push) Successful in 13m14s Details Build Packages / Create release (push) Has been skipped Details Build Packages / build:rpm (ubuntu2204) (push) Successful in 13m19s Details Build Packages / build:rpm (rocky8_sls9) (push) Successful in 13m25s Details Build Packages / Build documentation (push) Successful in 40s Details Build Packages / build:rpm (rocky9_nocuda) (push) Successful in 14m0s Details Build Packages / build:rpm (rocky9) (push) Successful in 13m54s Details Build Packages / build:rpm (ubuntu2404) (push) Successful in 6m38s Details Build Packages / Unit tests (push) Successful in 53m53s Details Build Packages / build:rpm (ubuntu2404_nocuda) (pull_request) Successful in 12m9s Details Build Packages / build:rpm (rocky8_nocuda) (pull_request) Successful in 13m5s Details Build Packages / build:rpm (rocky8) (pull_request) Successful in 13m6s Details Build Packages / Generate python client (pull_request) Successful in 12s Details Build Packages / build:rpm (ubuntu2204_nocuda) (pull_request) Successful in 13m19s Details Build Packages / Create release (pull_request) Has been skipped Details Build Packages / build:rpm (ubuntu2204) (pull_request) Successful in 13m17s Details Build Packages / build:rpm (rocky8_sls9) (pull_request) Successful in 13m24s Details Build Packages / build:rpm (rocky9_nocuda) (pull_request) Successful in 13m46s Details Build Packages / Build documentation (pull_request) Successful in 43s Details Build Packages / build:rpm (rocky9) (pull_request) Successful in 14m6s Details Build Packages / build:rpm (ubuntu2404) (pull_request) Successful in 9m21s Details Build Packages / Unit tests (pull_request) Failing after 1h17m33s Details	2025-11-30 14:14:16 +01:00
Filip Leonarski	e1962fb20c	Frontend: Update	2025-11-30 14:09:48 +01:00
Filip Leonarski	276f951ba4	IndexAndRefine: Add option to turn off indexing via spot_finding_settings Some checks failed Build Packages / build:rpm (ubuntu2404_nocuda) (push) Successful in 11m26s Details Build Packages / build:rpm (rocky8_nocuda) (push) Successful in 12m11s Details Build Packages / Generate python client (push) Successful in 31s Details Build Packages / build:rpm (ubuntu2204) (push) Successful in 12m30s Details Build Packages / build:rpm (rocky8_sls9) (push) Successful in 13m2s Details Build Packages / build:rpm (rocky8) (push) Successful in 13m0s Details Build Packages / Create release (push) Has been skipped Details Build Packages / Build documentation (push) Successful in 40s Details Build Packages / build:rpm (ubuntu2204_nocuda) (push) Successful in 13m15s Details Build Packages / build:rpm (rocky9_nocuda) (push) Successful in 13m36s Details Build Packages / build:rpm (rocky9) (push) Successful in 13m22s Details Build Packages / build:rpm (ubuntu2404) (push) Successful in 7m1s Details Build Packages / Unit tests (push) Has been cancelled Details	2025-11-30 13:43:32 +01:00
Filip Leonarski	31c6aca777	IndexAndRefine: Refinement step is shared between rotation and still indexing Some checks failed Build Packages / build:rpm (ubuntu2404) (push) Has been cancelled Details Build Packages / Generate python client (push) Has been cancelled Details Build Packages / Build documentation (push) Has been cancelled Details Build Packages / Unit tests (push) Has been cancelled Details Build Packages / Create release (push) Has been cancelled Details Build Packages / build:rpm (rocky9) (push) Has been cancelled Details Build Packages / build:rpm (rocky8) (push) Has been cancelled Details Build Packages / build:rpm (ubuntu2404_nocuda) (push) Has been cancelled Details Build Packages / build:rpm (ubuntu2204) (push) Has been cancelled Details Build Packages / build:rpm (ubuntu2204_nocuda) (push) Has been cancelled Details Build Packages / build:rpm (rocky8_sls9) (push) Has been cancelled Details Build Packages / build:rpm (rocky8_nocuda) (push) Has been cancelled Details Build Packages / build:rpm (rocky9_nocuda) (push) Has been cancelled Details	2025-11-30 13:39:21 +01:00
Filip Leonarski	48241604f8	RotationIndexer: Fixes	2025-11-30 13:33:13 +01:00
Filip Leonarski	8326e4a59f	Revert "jfjoch_indexing_test: Bring back old, working code, to further modify" This reverts commit `756115606c`.	2025-11-30 13:32:13 +01:00
Filip Leonarski	756115606c	jfjoch_indexing_test: Bring back old, working code, to further modify Some checks failed Build Packages / build:rpm (ubuntu2404_nocuda) (push) Successful in 10m47s Details Build Packages / build:rpm (ubuntu2204_nocuda) (push) Successful in 12m40s Details Build Packages / build:rpm (rocky8_nocuda) (push) Successful in 12m45s Details Build Packages / Generate python client (push) Successful in 19s Details Build Packages / build:rpm (rocky8_sls9) (push) Successful in 13m18s Details Build Packages / Create release (push) Has been skipped Details Build Packages / Build documentation (push) Successful in 41s Details Build Packages / build:rpm (rocky8) (push) Successful in 13m22s Details Build Packages / build:rpm (ubuntu2204) (push) Successful in 13m26s Details Build Packages / build:rpm (rocky9_nocuda) (push) Successful in 13m54s Details Build Packages / build:rpm (rocky9) (push) Successful in 13m54s Details Build Packages / Unit tests (push) Has been cancelled Details Build Packages / build:rpm (ubuntu2404) (push) Has been cancelled Details	2025-11-30 13:23:07 +01:00
Filip Leonarski	cb983f5c74	IndexAndRefine: Another iteration	2025-11-30 13:20:26 +01:00
Filip Leonarski	69afeb488f	IndexAndRefine: Work in progress All checks were successful Build Packages / build:rpm (ubuntu2404_nocuda) (push) Successful in 11m41s Details Build Packages / build:rpm (ubuntu2204_nocuda) (push) Successful in 12m57s Details Build Packages / build:rpm (rocky8_nocuda) (push) Successful in 13m1s Details Build Packages / Generate python client (push) Successful in 10s Details Build Packages / build:rpm (rocky8_sls9) (push) Successful in 13m7s Details Build Packages / Create release (push) Has been skipped Details Build Packages / build:rpm (rocky9_nocuda) (push) Successful in 13m26s Details Build Packages / build:rpm (rocky8) (push) Successful in 13m27s Details Build Packages / build:rpm (ubuntu2204) (push) Successful in 13m23s Details Build Packages / Build documentation (push) Successful in 34s Details Build Packages / build:rpm (rocky9) (push) Successful in 13m58s Details Build Packages / build:rpm (ubuntu2404) (push) Successful in 7m5s Details Build Packages / Unit tests (push) Successful in 52m30s Details	2025-11-30 09:54:55 +01:00
Filip Leonarski	222b28c224	IndexAndRefine: Work in progress	2025-11-30 09:52:08 +01:00
Filip Leonarski	a08cc17f9f	IndexAndRefine: Fixes All checks were successful Build Packages / build:rpm (ubuntu2404_nocuda) (push) Successful in 12m15s Details Build Packages / build:rpm (rocky8_nocuda) (push) Successful in 13m17s Details Build Packages / build:rpm (ubuntu2204_nocuda) (push) Successful in 13m14s Details Build Packages / build:rpm (rocky8) (push) Successful in 13m13s Details Build Packages / build:rpm (ubuntu2204) (push) Successful in 13m13s Details Build Packages / Create release (push) Has been skipped Details Build Packages / build:rpm (rocky8_sls9) (push) Successful in 13m24s Details Build Packages / Generate python client (push) Successful in 19s Details Build Packages / Build documentation (push) Successful in 39s Details Build Packages / build:rpm (rocky9_nocuda) (push) Successful in 14m2s Details Build Packages / build:rpm (rocky9) (push) Successful in 14m0s Details Build Packages / build:rpm (ubuntu2404) (push) Successful in 6m45s Details Build Packages / Unit tests (push) Successful in 53m38s Details	2025-11-30 08:28:02 +01:00
Filip Leonarski	2c35655f5e	Frontend: Fix Some checks failed Build Packages / build:rpm (rocky8_nocuda) (push) Failing after 10m6s Details Build Packages / build:rpm (rocky9_nocuda) (push) Failing after 10m29s Details Build Packages / Generate python client (push) Successful in 27s Details Build Packages / Build documentation (push) Successful in 52s Details Build Packages / build:rpm (ubuntu2404_nocuda) (push) Failing after 11m50s Details Build Packages / Create release (push) Has been skipped Details Build Packages / build:rpm (ubuntu2204_nocuda) (push) Failing after 12m15s Details Build Packages / build:rpm (rocky9) (push) Failing after 12m18s Details Build Packages / build:rpm (rocky8) (push) Failing after 12m25s Details Build Packages / build:rpm (rocky8_sls9) (push) Failing after 12m34s Details Build Packages / build:rpm (ubuntu2204) (push) Failing after 12m31s Details Build Packages / build:rpm (ubuntu2404) (push) Failing after 6m52s Details Build Packages / Unit tests (push) Failing after 3h6m3s Details	2025-11-29 21:27:57 +01:00
Filip Leonarski	bbcf0efb4d	IndexAndRefine: Work in progress - seems to not work at the moment Some checks failed Build Packages / build:rpm (ubuntu2204_nocuda) (push) Failing after 3m6s Details Build Packages / build:rpm (ubuntu2404_nocuda) (push) Failing after 3m7s Details Build Packages / build:rpm (rocky8_nocuda) (push) Failing after 3m22s Details Build Packages / build:rpm (rocky8_sls9) (push) Failing after 3m16s Details Build Packages / build:rpm (rocky9_nocuda) (push) Failing after 3m22s Details Build Packages / build:rpm (rocky8) (push) Failing after 3m15s Details Build Packages / Create release (push) Has been skipped Details Build Packages / build:rpm (ubuntu2204) (push) Failing after 3m24s Details Build Packages / build:rpm (rocky9) (push) Failing after 3m26s Details Build Packages / Generate python client (push) Successful in 34s Details Build Packages / Build documentation (push) Successful in 48s Details Build Packages / build:rpm (ubuntu2404) (push) Has been cancelled Details Build Packages / Unit tests (push) Has been cancelled Details	2025-11-29 21:22:12 +01:00
Filip Leonarski	59930dfea0	OpenAPI: Add angular range Some checks failed Build Packages / build:rpm (ubuntu2404_nocuda) (push) Failing after 3m1s Details Build Packages / build:rpm (rocky9_nocuda) (push) Failing after 3m8s Details Build Packages / build:rpm (ubuntu2204_nocuda) (push) Failing after 3m6s Details Build Packages / build:rpm (rocky8_nocuda) (push) Failing after 3m13s Details Build Packages / build:rpm (ubuntu2204) (push) Failing after 2m59s Details Build Packages / build:rpm (rocky8_sls9) (push) Failing after 3m7s Details Build Packages / Create release (push) Has been skipped Details Build Packages / build:rpm (rocky8) (push) Failing after 3m22s Details Build Packages / build:rpm (rocky9) (push) Failing after 3m20s Details Build Packages / Generate python client (push) Successful in 32s Details Build Packages / Build documentation (push) Successful in 52s Details Build Packages / build:rpm (ubuntu2404) (push) Has been cancelled Details Build Packages / Unit tests (push) Has been cancelled Details	2025-11-29 21:14:05 +01:00
Filip Leonarski	118fed1d83	IndexAndRefine: Refactor integration	2025-11-29 21:05:42 +01:00
Filip Leonarski	70a03b87ff	IndexingSettings: Add rotation indexer specific settings	2025-11-29 20:21:26 +01:00
Filip Leonarski	c8d28a8921	RotationIndexer: Add resulting data	2025-11-29 19:04:05 +01:00
Filip Leonarski	36454a9637	RotationIndexer: Add quick refinement for the final frame to increase indexing stability All checks were successful Build Packages / build:rpm (ubuntu2404_nocuda) (push) Successful in 11m41s Details Build Packages / build:rpm (ubuntu2204_nocuda) (push) Successful in 12m0s Details Build Packages / Generate python client (push) Successful in 30s Details Build Packages / build:rpm (rocky8_sls9) (push) Successful in 12m50s Details Build Packages / build:rpm (rocky8_nocuda) (push) Successful in 13m2s Details Build Packages / Create release (push) Has been skipped Details Build Packages / Build documentation (push) Successful in 38s Details Build Packages / build:rpm (rocky8) (push) Successful in 13m7s Details Build Packages / build:rpm (ubuntu2204) (push) Successful in 13m15s Details Build Packages / build:rpm (rocky9_nocuda) (push) Successful in 13m39s Details Build Packages / build:rpm (rocky9) (push) Successful in 13m55s Details Build Packages / build:rpm (ubuntu2404) (push) Successful in 7m4s Details Build Packages / Unit tests (push) Successful in 53m30s Details	2025-11-29 18:55:00 +01:00
Filip Leonarski	a6745e7a1a	RotationIndexer: More information in output	2025-11-29 18:46:30 +01:00
Filip Leonarski	1b64f45fdc	RotationIndexer: Seems to return valid lattice for each image	2025-11-29 18:30:23 +01:00
Filip Leonarski	c67b4d0bb7	RotationIndexer: Works on test lyso with consistent result to XDS!!!	2025-11-29 18:10:09 +01:00
Filip Leonarski	549bb9fb5d	RotationIndexer: Work in progress	2025-11-29 17:28:33 +01:00
Filip Leonarski	163518f724	RotationIndexer: Further improvements	2025-11-29 16:35:20 +01:00
Filip Leonarski	1d753524e4	XtalOptimizer: Add rotation axis	2025-11-29 16:12:35 +01:00
Filip Leonarski	c9ffe8d60e	SpotToSave: Add image number	2025-11-29 15:53:36 +01:00
Filip Leonarski	020b5d6651	XtalOptimizer: add option to refine distance mm	2025-11-29 15:40:46 +01:00
Filip Leonarski	907774e3a6	XtalOptimizer: Provide 3x3 rotation matrix as parameter (to combine detector rotation with crystal rotation array) All checks were successful Build Packages / build:rpm (ubuntu2404_nocuda) (push) Successful in 11m25s Details Build Packages / build:rpm (ubuntu2204_nocuda) (push) Successful in 12m44s Details Build Packages / build:rpm (rocky8_nocuda) (push) Successful in 12m48s Details Build Packages / Generate python client (push) Successful in 12s Details Build Packages / build:rpm (ubuntu2204) (push) Successful in 12m52s Details Build Packages / Create release (push) Has been skipped Details Build Packages / build:rpm (rocky8_sls9) (push) Successful in 13m13s Details Build Packages / build:rpm (rocky8) (push) Successful in 13m15s Details Build Packages / build:rpm (rocky9_nocuda) (push) Successful in 13m28s Details Build Packages / Build documentation (push) Successful in 39s Details Build Packages / build:rpm (rocky9) (push) Successful in 13m59s Details Build Packages / build:rpm (ubuntu2404) (push) Successful in 7m13s Details Build Packages / Unit tests (push) Successful in 50m24s Details	2025-11-29 15:22:31 +01:00
Filip Leonarski	3881438781	jfjoch_indexing_test: Rotation indexer test (for the time being)	2025-11-29 15:13:09 +01:00
Filip Leonarski	e4da987070	RotationalIndexer: Work in progress	2025-11-29 15:12:36 +01:00
Filip Leonarski	4948b4b7b0	XtalOptimizer: Make beam center, distance explicit parameter for refinement	2025-11-29 15:06:04 +01:00
Filip Leonarski	87a9a0b745	SpotAnalyze: Extract spot analysis function into a dedicated	2025-11-29 14:07:24 +01:00
Filip Leonarski	15e8e47b39	RotationIndexer: Work in progress on rotation data indexer	2025-11-29 14:00:05 +01:00
Filip Leonarski	4225173daa	Indexer: Add more general Run() call with reciprocal coordinates to accommodate more demanding schemes	2025-11-29 13:59:52 +01:00
Filip Leonarski	b6b6bab064	CrystalLattice: Add multiply option for rotation matrix	2025-11-29 13:58:45 +01:00
Filip Leonarski	23fc9a27d8	jfjoch_broker: Add safety for a code that potentially caused the optimizer to get to NaN (need to investigate further)	2025-11-29 12:22:12 +01:00
Filip Leonarski	1565c5a19f	Frontend: Remove vulnerability	2025-11-29 11:18:38 +01:00
Filip Leonarski	d3a00621fd	VERSION: 1.0.0-rc.112	2025-11-29 11:14:46 +01:00

v1.0.0-rc.112 #18

37 Commits