4 Commits

Include renames

Author	SHA1	Message	Date
leonarski_fandClaude Opus 5	db9cc9106f	rugnux: the per-reflection correction factor is named for what it is, not for what it once held ... The factor multiplied into each integrated intensity was called rlp, for reciprocal Lorentz-polarization, and until this week that is all it held. It now also carries the sensor efficiency at the angle the beam arrives, and on the stills path it holds that efficiency and the polarization with no Lorentz term at all - correctly, since the Lorentz factor of a still is one. Three different products under one name that promises exactly one of them, in code where the neighbouring member is the total correction. Rename it prescaling_corr: multiplicative, applied before scaling, therefore not a scale, and silent about its contents - which is the point, since the contents have now grown twice. It is also what DIALS calls the same product. The stills refinement member spelled "1 / rlp" becomes inv_corr, and the comments and usage text that promised "the Lorentz-polarization factor and nothing else" now say what is actually there. The Lorentz term keeps its own name where it is computed, because that name is correct. The two external spellings are untouched: the CBOR key and the reflection dataset are a published format, and a reader that meets an unknown key would take the factor as zero, which both the merge key and the ingest treat as a reflection to drop - so every reflection would vanish and the run would still exit zero. No output changes: the merged and unmerged files of two full runs are byte for byte what the previous binary wrote, four stored files from before the efficiency correction still re-scale identically, and the reflection datasets of the process file are unchanged. Co-Authored-By: Claude Opus 5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01EFEJG6WBQv8th4UJFNe53N	2026-09-05 13:41:16 +02:00
leonarski_f	1ab257af6c	v1.0.0-rc.125 (#32) ... This is an UNSTABLE release. This version adds scalign and merging. These are experimental at the moment, and should not be used for production analysis. If things go wrong with analysis, it is better to revert to 1.0.0-rc.124. * jfjoch_broker: Improve logic on switching on/off spot finding * jfjoch_broker: Increase maximum spot count for FFBIDX to 65536 * jfjoch_broker: Increase default maximum unit cell for FFT to 500 A (could have performance impact, TBD) * jfjoch_process: Add scalign and merging functionality - program is experimental at the moment and should not be used for production analysis * jfjoch_viewer: Display partiality and reciprocal Lorentz-polarization correction for each reflection * jfjoch_writer: Save more information about each reflection Reviewed-on: #32 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2026-02-18 16:17:21 +01:00
leonarski_f	4dbbf0e365	v1.0.0-rc.97 ... This is an UNSTABLE release and not recommended for production use (please use rc.96 instead). * jfjoch_broker: For DECTRIS detectors add dark data collection during initialization for bad pixel mask * jfjoch_broker: Refactor of calibration logic for more clear code (likely to introduce problems) * jfjoch_viewer: Add option to handle user pixel mask (experimental) * jfjoch_viewer: More options for ROI * jfjoch_viewer: Add window to display calibration Reviewed-on: #2 Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch> Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch>	2025-11-09 12:42:27 +01:00
leonarski_f	c67337cfe1	v1.0.0-rc.72	2025-09-08 20:28:59 +02:00