leonarski_f
33e9a368f6
jfjoch_tests: Fix lattice test with VDS HDF5
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2026-05-29 19:50:50 +02:00
leonarski_f
4674aff202
jfjoch_test: Fix JFJochReader_NiggliClass_VDS
2026-05-29 15:03:58 +02:00
leonarski_f
8660558341
JFJochHDF5Reader: Use lattice, and not Niggli class, to decode symmetry (if symmetry is imposed, then lattice search returns niggli class 0
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2026-05-29 12:23:26 +02:00
leonarski_f
56764a948b
JFJochHDF5Reader: Read spots for one image
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2026-05-28 22:04:17 +02:00
leonarski_f
fc68a9baed
v1.0.0-rc.146 ( #56 )
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This is an UNSTABLE release. The release has significant modifications for data processing - in case of troubles go back to 1.0.0-rc.144.
jfjoch_process: Generate a dedicated file (_process.h5), which can be used as a replacement for the _master.h5 file for a reanalyzed dataset.
jfjoch_process: Improve the performance of scaling and merging, implement on the fly scaling.
jfjoch_writer: All final data analysis results are repopulated in the _master.h5 file.
jfjoch_scale: Dedicated tool for rescaling/merging existing data.
jfjoch_viewer: Fix bugs where pixel labels where displayed on a wrong pixel.
WARNING! Scaling and merging are experimental at the moment, and may not provide reasonable results for the time being.
Reviewed-on: #56
2026-05-28 18:48:35 +02:00
leonarski_f
caef26873e
v1.0.0-rc.145 ( #55 )
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This is an UNSTABLE release. The release has significant modifications for HDF5 writing logic - in case of troubles go back to 1.0.0-rc.144.
* **Default HDF5 writing mode is with VDS, not soft-links** - this improves DIALS compatibility and makes format more future-proof, NXmx legacy format might be phased-out in the future.
* XDS plugin: Improve performance of VDS reading.
* jfjoch_writer: Significant improvement on how file systems I/O are handled through a dedicated pass-through VFD.
* jfjoch_writer: Clean-up of HDF5 routines to better handle issues.
Reviewed-on: #55
2026-05-06 21:50:02 +02:00
leonarski_f
d760b12a18
v1.0.0-rc.141 ( #51 )
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This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.
* jfjoch_broker: Azimuthal integration mapping is generated with parallel computations, significantly reducing setup times
* frontend: Fix selection of FFTW in indexing settings
Reviewed-on: #51
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch >
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch >
2026-04-30 13:04:54 +02:00
leonarski_f
239a441ee6
v1.0.0-rc.140 ( #50 )
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This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.
* jfjoch_broker: For DECTRIS detectors, ZeroMQ link is persistent, to save time for establishing new connection
* jfjoch_broker: Minor bug fixes for rare conditions
Reviewed-on: #50
2026-04-29 21:40:22 +02:00
leonarski_f
4a852b4d6b
v1.0.0-rc.134 ( #43 )
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This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132.
* jfjoch_broker: Add better locking for detector object - should help, when detector initialization takes too long
* jfjoch_writer: Enable writing single, integrated HDF5 file with both data and metadata
* XDS plugin: Add generation of Jungfraujoch plugin for XDS
* CI: Add tests with XDS and DIALS (`xia2.ssx`)
Reviewed-on: #43
2026-04-09 13:30:47 +02:00
leonarski_f
166fcdb68f
v1.0.0-rc.131 ( #39 )
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This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.124.
* jfjoch_broker: Fix bug in saving JUNGFRAU calibration (pedestal/pedestalRMS)
* jfjoch_viewer: Fix calibration (pedestal) images being open flipped
* jfjoch_process: Add space group detection (EXPERIMENTAL)
Reviewed-on: #39
2026-03-07 11:34:04 +01:00
leonarski_f
36d0507758
v1.0.0-rc.119 ( #26 )
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This is an UNSTABLE release and not recommended for production use (please use rc.111 instead).
* jfjoch_broker: Add binary export of data analysis plots over OpenAPI
* jfjoch_broker: Minor fixes to HTTP error handling
* jfjoch_viewer: Prefer binary plots over JSON plots
* jfjoch_viewer: Change foreground with F button + wheel
* jfjoch_viewer: Change way how angles are displayed
* jfjoch_viewer: Display resolution of the mouse cursor in top left corner
Reviewed-on: #26
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch >
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch >
2025-12-08 19:53:35 +01:00
leonarski_f
31a357fa57
v1.0.0-rc.113 ( #19 )
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This is an UNSTABLE release and not recommended for production use (please use rc.111 instead).
* jfjoch_broker: Improve handling of rotation indexing
* jfjoch_broker: More information saved in CBOR end message (WIP)
* jfjoch_writer: Save rotation indexing lattice parameters and Niggli class
* jfjoch_viewer: Remove (for now) primitive cell information
Reviewed-on: #19
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch >
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch >
2025-12-02 09:29:22 +01:00
leonarski_f
f44c6520a8
v1.0.0-rc.107 ( #12 )
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This is an UNSTABLE release.
* jfjoch_viewer: Minor polishing of new functionality
* jfjoch_broker: User NaN for empty azimuthal bins
Reviewed-on: #12
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch >
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch >
2025-11-24 07:07:32 +01:00
leonarski_f
a6b5cb5629
v1.0.0-rc.105 ( #10 )
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This is an UNSTABLE release.
* jfjoch_viewer: Clean-up widgets slightly
* jfjoch_viewer: Limit right panel to 600 pixels
* jfjoch_viewer: Parse crystal symmetry type
* jfjoch_viewer: Grid scan view takes color map and can be fit to zoom
Reviewed-on: #10
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch >
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch >
2025-11-20 09:46:25 +01:00
leonarski_f
95acf3aba3
v1.0.0-rc.104 ( #9 )
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This is an UNSTABLE release.
jfjoch_writer: Fix and improve the way grid scan geometry is saved (non-NXmx extension makes it way easier)
jfjoch_viewer: Display grid scan results in 2D (work in progress)
jfjoch_viewer: Improve auto-scaling on start of images (work in progress)
jfjoch_viewer: Add B-factor and resolution estimate to the dataset info plots
Reviewed-on: #9
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch >
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch >
2025-11-19 17:28:10 +01:00
leonarski_f
4dbbf0e365
v1.0.0-rc.97
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This is an UNSTABLE release and not recommended for production use (please use rc.96 instead).
* jfjoch_broker: For DECTRIS detectors add dark data collection during initialization for bad pixel mask
* jfjoch_broker: Refactor of calibration logic for more clear code (likely to introduce problems)
* jfjoch_viewer: Add option to handle user pixel mask (experimental)
* jfjoch_viewer: More options for ROI
* jfjoch_viewer: Add window to display calibration
Reviewed-on: #2
Co-authored-by: Filip Leonarski <filip.leonarski@psi.ch >
Co-committed-by: Filip Leonarski <filip.leonarski@psi.ch >
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