2 Commits

Include renames

Author	SHA1	Message	Date
leonarski_fandClaude Opus 5.5	9c5141c7c0	CPU pixel pipeline: decode, preprocess and ring pass per bitshuffle block; flag rings in the local sweep ... The CPU-only image loop is DRAM-bound on 16M frames: decode, preprocess, the adaptive finder's plain ring pass and FlagRings each streamed the whole frame through memory. - JFJochDecompressHperfBlocks hands each decoded bitshuffle block to a callback; with no output buffer the block is unshuffled into a reused block-sized scratch (JFJochDecompressBlocks). - MXAnalysisWithoutFPGA::PreprocessCPU preprocesses each block into the int32 buffer (ImagePreprocessorCPU::AnalyzeBlock) and, when the fused CPU finder runs, puts it through the plain ring pass + fused azint (AdaptiveSpotFinderCPU::AccumulateRingsBlock) while it is in cache. Detect() then starts from those sums. The per-worker decompression buffer is no longer allocated for bitshuffled data. - FlagRings becomes FlagRow, called by DetectAt's first pass for row y+NBX just before that row enters the vertical sums; first_pass_needed is marked from each row's candidates at the same point. Exact: blocks arrive in pixel order, so the float azint sums see the same pixels in the same order; the per-pixel expressions are unchanged; everything else is integer. p.hkl, p.mtz, p_P1.mtz and p_unmerged.mtz byte-identical to rc173 on myob, cytc, lyso, sparse (CPU-only build), GPU myob identical (the GPU path does not take this route). CPU-only, 32 workers, under the gpulock on a shared (loaded) machine, base -> fused, two rounds (second in reversed order): myob 155.9 -> 97.7 s, 139.9 -> 88.1 s (loop 46.1 -> 26.8 s/pass; user 3690 -> 2221 s) cytc 220.8 -> 156.6 s, 216.6 -> 155.1 s (user 5160 -> 4128 s) lyso 134.5 -> 123.3 s, 69.5 -> 64.8 s peak RSS myob 15.2 -> 10.8 GB, cytc 12.6 -> 10.4 GB, lyso 7.0 -> 6.7 GB Co-Authored-By: Claude Opus 5.5 (1M context) <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01D1G8gJVAy6gp1K5Dz3NE5C	2026-09-28 02:00:50 +02:00
leonarski_f	c981e1b91c	v1.0.0-rc.137 (#46) ... This is an UNSTABLE release. The release has significant modifications and bug fixes, if things go wrong, it is better to revert to 1.0.0-rc.132. * jfjoch_broker: Better track time for each operation in the processing stack * jfjoch_broker: Rewrite preprocessing of diffraction images in the non-FPGA workflow to better use GPUs (work in progress) * jfjoch_broker: Remove ROI calculation in the non-FPGA workflow (work in progress) * jfjoch_viewer: Toolbar displays image number starting from 1 (instead of 0) Reviewed-on: #46	2026-04-25 19:59:21 +02:00