manual changes on fs

anaconda_env

@@ -0,0 +1,15 @@
+#!/bin/bash
+
+#if [ $# != 1  ]; then
+#    echo "Usage: $0 [alvra|bernina]"
+#    exit 1
+#fi
+    
+dest=/sf/bernina/anaconda/4.4.0
+
+echo Loading PSI Anaconda Python distribution 3.6
+module load psi-python36/4.4.0
+
+echo Activating BERNINA Conda environment
+source activate $dest
+

chromeAs

@@ -0,0 +1,11 @@
+#!/bin/bash
+#function set-title() {
+#  if [[ -z "$ORIG" ]]; then
+#    ORIG=$PS1
+#  fi
+#  TITLE="\[\e]2;$*\a\]"
+#  PS1=${ORIG}${TITLE}
+#}
+#set-title "chrome terminal"
+
+gnome-terminal -e "su $1 -c google-chrome"

correlation_panel

@@ -0,0 +1,10 @@
+#!/bin/bash
+
+/opt/gfa/pshell/pshell \
+     -jvmarg="-Duser.home=/sf/bernina/data"  \
+     -dlaf \
+     -home=/sf/bernina/config/pshell_be \
+     -data=/sf/bernina/config/pshell_data \
+     -l -d -k -q -b \
+     -p=Correlation.java $@ 
+

eco

@@ -1,7 +1,7 @@
 #/bin/bash
 source /opt/gfa/python
 export PYTHONPATH=$PYTHONPATH:/sf/bernina/config/src/python
-ipython --no-banner -c "\
+ipython --pylab --no-banner -c "\
 print('                       ___ _______\n                      / -_) __/ _ \ \n Experiment Control   \__/\__/\___/ \n\n');\
 from eco.instruments import bernina;\
 from eco.instruments.bernina import *;\

ecotest

@@ -0,0 +1,10 @@
+#/bin/bash
+#source /opt/gfa/python
+source activate /sf/bernina/jungfrau/envs/jungfrau_client
+export PYTHONPATH=$PYTHONPATH:/sf/bernina/config/src/python
+ipython --no-banner -c "\
+print('                       ___ _______\n                      / -_) __/ _ \ \n Experiment Control   \__/\__/\___/ \n\n');\
+from eco.instruments import bernina;\
+from eco.instruments.bernina import *;\
+" -i
+

jungfrau_console

@@ -0,0 +1,23 @@
+#!/bin/bash
+
+BL=bernina
+check=`which conda 2> /dev/null | grep /$BL/anaconda/4.4.0`
+
+if [ "$check" == "" ]; then
+    source /sf/$BL/bin/anaconda_env
+fi
+
+MATPLOT_TRY='exec("try: import matplotlib.pyplot as plt\nexcept: sys.exit(1)");'
+
+CONFIG='import sys; from detector_integration_api import DetectorIntegrationClient; api_address = "http://sf-daq-1:10000"; client_1p5 = DetectorIntegrationClient(api_address); print("\nJungfrau Integration API on %s" % api_address);import h5py;import numpy as np;'$MATPLOT_TRY'import dask.array as da;print("Imported matplotlib (as plt), h5py, numpy (as np), dask.array (as da)"); exec("""if "client_1p5" in locals(): print("Jungfrau 1.5M client available as client_1p5. Try: client_1p5.get_status() ") """);'
+
+echo Starting Interactive Python session
+export QT_XKB_CONFIG_ROOT=/sf/alvra/anaconda/4.4.0/jungfrau_utils/lib
+if [ "$1" == "nox" ]; then
+    export QT_QPA_PLATFORM='offscreen'
+    echo "Starting no-graphics version"
+else
+    echo If you get \"Could not connect to display\" or similar, try: \"jungfrau_console nox\"
+fi
+ipython -i -c "$CONFIG"
+

jungfrau_console_nox~

@@ -0,0 +1,18 @@
+#!/bin/bash
+
+BL=bernina
+check=`which conda | grep /$BL/anaconda/4.4.0`
+
+if [ "$check" == "" ]; then
+    source /sf/$BL/bin/anaconda_env
+fi
+
+MATPLOT_TRY='exec("try: import matplotlib.pyplot as plt\nexcept: sys.exit(1)");'
+
+CONFIG='import sys; from detector_integration_api import DetectorIntegrationClient; api_address = "http://sf-daq-1:10000"; client_1p5 = DetectorIntegrationClient(api_address); print("\nJungfrau Integration API on %s" % api_address);import h5py;import numpy as np;'$MATPLOT_TRY'import dask.array as da;print("Imported matplotlib (as plt), h5py, numpy (as np), dask.array (as da)"); exec("""if "client_4p5" in locals(): print("Jungfrau 1.5M client available as client_1p5. Try: client_1p5.get_status() ") """);'
+
+echo Starting Interactive Python session - no graphical display version
+export QT_XKB_CONFIG_ROOT=/sf/alvra/anaconda/4.4.0/jungfrau_utils/lib
+export QT_QPA_PLATFORM='offscreen'
+ipython -i -c "$CONFIG"
+

launcher

@@ -7,3 +7,6 @@ if [ "$#" -eq 0 ]; then
 else
   pylauncher -m /sf/bernina/config/launcher_mapping $@
 fi
+sleep 5
+wmctrl -r "SF-Bernina Launcher" -b add,above
+

launcher_dev

@@ -0,0 +1,9 @@
+#!/bin/bash
+
+source /opt/gfa/python 3.5
+
+if [ "$#" -eq 0 ]; then
+  pylauncher -m /sf/bernina/config/launcher_mapping --position 80 -120 /sf/bernina/config/launcher_dev/S_Bernina.json
+else
+  pylauncher -m /sf/bernina/config/launcher_mapping $@
+fi

pshell_be

@@ -0,0 +1,13 @@
+#!/bin/bash
+
+/opt/gfa/pshell/pshell \
+     -jvmarg="-Duser.home=/sf/bernina/data"  \
+     -last \
+     -dlaf \
+     -r \
+     -py3 \
+     -home=/sf/bernina/config/pshell_be \
+     -data=/sf/bernina/config/pshell_data \
+     -strh=/sf/bernina/config/pshell_be/stripchart \
+     $@
+

record_camera

@@ -0,0 +1,13 @@
+#!/bin/bash
+
+if (( $# != 2 )); then
+    echo "usage: $0 <camera> <filename>"
+    exit -1
+fi
+
+CAMERA_NAME=$1
+FILENAME=$2
+
+STREAM=$(curl -s http://sf-daqsync-01:8889/api/v1/pipeline/instance/${CAMERA_NAME}_sp1 | sed -e 's/.*"stream": "\([^"]*\)".*/\1/')
+echo $STREAM
+bs h5 -s $STREAM -m sub $FILENAME

remoteDesktop

@@ -0,0 +1,2 @@
+#!/bin/bash
+xfreerdp -u $1 --no-nla -d PSICH -g 2000x1000 $2

screen_panel

@@ -0,0 +1,15 @@
+#!/bin/bash
+
+
+/opt/gfa/pshell/pshell \
+     -jvmarg="-Duser.home=/sf/bernina/data"  \
+     -test -dlaf \
+     -home=/sf/bernina/config/pshell_be \
+     -data=/sf/bernina/config/pshell_data \
+     -l -d -k -q -b -e -g -n -buf=10 -poll=250 -clog=SEVERE \
+     -p=SfCamera.java \
+     -p=Inventory.java \
+     -p=CameraCalibrationDialog.java \
+     -p=ScreenPanel2.java \
+     -srv_url=sf-daqsync-01:8889 -cam_srv_url=sf-daqsync-01:8888 $@
+

strip_chart

@@ -0,0 +1,11 @@
+#!/bin/bash
+
+
+/opt/gfa/pshell/pshell \
+     -jvmarg="-Duser.home=/sf/bernina/config/pshell_be/stripchart"  \
+     -home=/sf/bernina/config/pshell_be \
+     -data=/sf/bernina/config/pshell_data \
+     -l -b \
+     -dlaf \
+     -strp \
+     -strh=/sf/bernina/config/pshell_be/stripchart $@

swissfelStatus

@@ -0,0 +1,2 @@
+#!/bin/bash
+caqtdm -stylefile sfop.qss -macro "chargelim=15" -attach S_OP_overview_for_photonics.ui 

terminalAs

@@ -0,0 +1,11 @@
+#!/bin/bash
+#function set-title() {
+#  if [[ -z "$ORIG" ]]; then
+#    ORIG=$PS1
+#  fi
+#  TITLE="\[\e]2;$*\a\]"
+#  PS1=${ORIG}${TITLE}
+#}
+#set-title "chrome terminal"
+
+gnome-terminal -e "bash -c 'su $1;$SHELL'"

winterm

@@ -0,0 +1,2 @@
+#!/bin/bash
+xfreerdp -u $1 --no-nla -d PSICH -g 2000x1500 winterm1