new micromamba env

eco_new

@@ -1,7 +1,6 @@
 #/bin/bash
-#source /opt/gfa/python
+default=sfb312
-source anaconda_env
+dest=${1:-$default}
-
+source mm_bernina_env $dest
-ipython --profile=eco
-#python /sf/bernina/config/src/python/eco/startup.py -s bernina "$@" -l
 
+ipython --pylab --profile=eco3 --no-banner -i -c "run /sf/bernina/config/src/python/eco/startup_inline_new.py -l -s bernina"

mm_bernina

@@ -0,0 +1,16 @@
+# !! Contents within this block are managed by 'conda init' !!
+# >>> mamba initialize >>>
+# !! Contents within this block are managed by 'micromamba shell init' !!
+export MAMBA_EXE='/gfa/.mounts/sf_bernina/bin/micromamba';
+export MAMBA_ROOT_PREFIX='/gfa/.mounts/sf_bernina/applications/mm';
+__mamba_setup="$("$MAMBA_EXE" shell hook --shell bash --root-prefix "$MAMBA_ROOT_PREFIX" 2> /dev/null)"
+if [ $? -eq 0 ]; then
+    eval "$__mamba_setup"
+else
+    alias micromamba="$MAMBA_EXE"  # Fallback on help from micromamba activate
+fi
+unset __mamba_setup
+# <<< mamba initialize <<<
+
+
+

mm_bernina_env

@@ -0,0 +1,21 @@
+#!/bin/bash
+
+#if [ $# != 1  ]; then
+#    echo "Usage: $0 [alvra|bernina]"
+#    exit 1
+#fi
+    
+default="sfb312"
+dest=${1:-$default}
+
+echo Loading Bernina Micromamba/conda Python # <<< conda initialize <<<
+source /sf/bernina/bin/mm_bernina
+
+
+micromamba config --add envs_dirs /sf/bernina/applications/mm/envs
+#conda config --set env_prompt '({name})'
+
+echo Activating Micromamba/conda environment ${1:-$dest}
+micromamba activate ${1:-$dest}
+#source activate $dest
+