diff --git a/eco_new b/eco_new index f9fc297..edf6403 100755 --- a/eco_new +++ b/eco_new @@ -1,7 +1,6 @@ #/bin/bash -#source /opt/gfa/python -source anaconda_env - -ipython --profile=eco -#python /sf/bernina/config/src/python/eco/startup.py -s bernina "$@" -l +default=sfb312 +dest=${1:-$default} +source mm_bernina_env $dest +ipython --pylab --profile=eco3 --no-banner -i -c "run /sf/bernina/config/src/python/eco/startup_inline_new.py -l -s bernina" diff --git a/micromamba b/micromamba new file mode 100755 index 0000000..9538c69 Binary files /dev/null and b/micromamba differ diff --git a/mm_bernina b/mm_bernina new file mode 100755 index 0000000..2e2a58c --- /dev/null +++ b/mm_bernina @@ -0,0 +1,16 @@ +# !! Contents within this block are managed by 'conda init' !! +# >>> mamba initialize >>> +# !! Contents within this block are managed by 'micromamba shell init' !! +export MAMBA_EXE='/gfa/.mounts/sf_bernina/bin/micromamba'; +export MAMBA_ROOT_PREFIX='/gfa/.mounts/sf_bernina/applications/mm'; +__mamba_setup="$("$MAMBA_EXE" shell hook --shell bash --root-prefix "$MAMBA_ROOT_PREFIX" 2> /dev/null)" +if [ $? -eq 0 ]; then + eval "$__mamba_setup" +else + alias micromamba="$MAMBA_EXE" # Fallback on help from micromamba activate +fi +unset __mamba_setup +# <<< mamba initialize <<< + + + diff --git a/mm_bernina_env b/mm_bernina_env new file mode 100644 index 0000000..51dc994 --- /dev/null +++ b/mm_bernina_env @@ -0,0 +1,21 @@ +#!/bin/bash + +#if [ $# != 1 ]; then +# echo "Usage: $0 [alvra|bernina]" +# exit 1 +#fi + +default="sfb312" +dest=${1:-$default} + +echo Loading Bernina Micromamba/conda Python # <<< conda initialize <<< +source /sf/bernina/bin/mm_bernina + + +micromamba config --add envs_dirs /sf/bernina/applications/mm/envs +#conda config --set env_prompt '({name})' + +echo Activating Micromamba/conda environment ${1:-$dest} +micromamba activate ${1:-$dest} +#source activate $dest +