Commit Graph

124 Commits

Author SHA1 Message Date
5a0047b6d5 Refactor AareDB backend and update schemas and paths.
Revised backend schema definitions, removing unnecessary attributes and adding new configurations. Updated file path references to align with the aaredb structure. Cleaned up redundant notebook content and commented out unused database regeneration logic in the backend.

Added posting a result to the database
2025-03-17 11:51:07 +01:00
fbc32474ff Refine event types and update related models and logic
Standardized event types with stricter validation using `Literal`. Adjusted related data and logic to align with new types, including changes to PGROUP assignments, event timeline increments, and schema updates. Cleaned up unused code and clarified database initialization behavior.
2025-03-14 13:11:05 +01:00
2e1d87c31b Update dependencies and migrate to Node 18 minimum support
Upgraded multiple package versions, including `@esbuild` and dependencies like `@mui/x-data-grid-premium`. Adjusted `node` engine requirement to `>=18` for compatibility. This ensures modernization and alignment with current toolchain standards.
2025-03-04 10:42:24 +01:00
548a86678b Update SampleTracker to support dynamic activePgroup
Enhanced the `SampleTracker` component to accept and utilize an `activePgroup` prop, allowing dynamic filtering of data based on the current project group. Adjusted related polling and data fetching logic to respond to changes in `activePgroup`. Removed excessive code from the test notebook for cleanup.
2025-02-27 11:20:04 +01:00
2f5cb3032a Add development-only user simulation using local file
This change introduces a fallback mechanism for development environments, allowing authentication to simulate a user from a local file named "user" when not found in the mock database. The file must include a username on the first line and a space-delimited list of pgroups on the second line. This enhancement helps streamline development workflows while maintaining error handling for missing or malformed files.
2025-02-27 10:45:16 +01:00
7a9cc24e05 Add development-only user simulation using local file
This change introduces a fallback mechanism for development environments, allowing authentication to simulate a user from a local file named "user" when not found in the mock database. The file must include a username on the first line and a space-delimited list of pgroups on the second line. This enhancement helps streamline development workflows while maintaining error handling for missing or malformed files.
2025-02-27 10:39:45 +01:00
b04c7b8c95 Add Image models and clean up test code structure
Introduced `ImageCreate` and `Image` models to handle image-related data in the backend. Improved the organization and readability of the testing notebook by consolidating and formatting code into distinct sections with markdown cells.
2025-02-26 15:11:20 +01:00
1606e80f81 Add Image models and clean up test code structure
Introduced `ImageCreate` and `Image` models to handle image-related data in the backend. Improved the organization and readability of the testing notebook by consolidating and formatting code into distinct sections with markdown cells.
2025-02-26 13:33:23 +01:00
f588bc0cda Add endpoint for creating local contacts with access control
Introduced a new `local_contact_router` to handle creation of local contacts. The endpoint enforces role-based access control and ensures no duplication of email addresses. Updated the router exports for consistency and cleaned up a large test file to improve readability.
2025-02-26 09:58:19 +01:00
43d67b1044 Enhance Dewar handling and display in logistics system
Added new fields and enriched data representations in DewarStatusTab, backend schemas, and APIs to improve dewar tracking and management. Introduced new API endpoint `/dewar/table` for simplified data rendering. Applied logging and validations for missing relationships.
2025-02-05 21:43:17 +01:00
25673ae05c added tabs to logistics frontend 2025-02-05 11:55:46 +01:00
9e5ae2b43c Refactor puck event handling and add tell filtering
Updated puck event queries to improve robustness and ensure distinct results. Introduced filtering by `tell` in specific API endpoints and added validation for `tell` values. Incremented project version to 0.1.0a21 to reflect API changes.
2025-02-04 17:07:25 +01:00
780ba1959f Add SetTellPositionRequest schema and minor cleanup.
Added a new `SetTellPositionRequest` schema in `schemas.py` to support bulk updates of TELL positions. Commented out redundant metadata operations in `main.py` and cleaned up unused content in the test notebook for better readability.
2025-02-04 14:43:59 +01:00
70962ba67a Refactor dewar query to use latest event subquery.
Replaces the previous query logic with a subquery to find the latest logistics event for each dewar. Ensures that only dewars with the most recent "beamline" event are retrieved, improving query accuracy and clarity.
2025-02-03 11:46:27 +01:00
b63f696543 Fix timestamp method and loop variable order issues
Updated `datetime.utcnow()` to `datetime.now()` to align with local timezone handling. Corrected the order of unpacked variables in the loop to match the structure of `pucks_with_latest_events`.
2025-01-31 14:57:06 +01:00
7ce8c50179 Fix timestamp method and loop variable order issues
Updated `datetime.utcnow()` to `datetime.now()` to align with local timezone handling. Corrected the order of unpacked variables in the loop to match the structure of `pucks_with_latest_events`.
2025-01-31 12:58:15 +01:00
3757950b51 Refactor Dewar service methods and improve field handling
Updated Dewar API methods to use protected endpoints for enhanced security and consistency. Added `pgroups` handling in various frontend components and modified the LogisticsView contact field for clarity. Simplified backend router imports for better readability.
2025-01-30 15:25:04 +01:00
c2215860bf Refactor Dewar service methods and improve field handling
Updated Dewar API methods to use protected endpoints for enhanced security and consistency. Added `pgroups` handling in various frontend components and modified the LogisticsView contact field for clarity. Simplified backend router imports for better readability.
2025-01-30 13:39:49 +01:00
44582cf38e Add pgroup handling in dewars and enhance ShipmentDetails UI
Introduced a new `pgroups` attribute for dewars in the backend with schema and model updates. Modified the frontend to display `pgroups` as chips, integrate new visual icons for pucks and crystals, and enhance the UI/UX in `ShipmentDetails` and `DewarStepper` components. Added reusable SVG components for better modularity and design consistency.
2025-01-23 13:57:25 +01:00
173e192fc4 Integrate pgroups for shipment data security
Added `pgroups` to secure and associate data with specific permission groups. Updated backend routers, database models, and API endpoints to handle authorization based on `pgroups`. Adjusted frontend components and hooks to support `pgroups` in data fetching and management workflows.
2025-01-22 22:53:37 +01:00
382b1eaba8 Refactor contact handling across backend and frontend
Replaced usage of "ContactPerson" with "Contact" for consistency across the codebase. Updated related component props, state variables, API calls, and database queries to align with the new model. Also enhanced backend functionality with stricter validations and added support for handling active pgroups in contact management.
2025-01-22 16:31:08 +01:00
6cde57f783 **Commit Message:**
Enhance app with active pgroup handling and token updates

Added active pgroup state management across the app for user-specific settings. Improved token handling with decoding, saving user data, and setting OpenAPI authorization. Updated components, API calls, and forms to support dynamic pgroup selection and user-specific features.
2025-01-22 13:55:26 +01:00
4630bcfac5 Add mount_count and unmount_count tracking for samples
Introduced `mount_count` and `unmount_count` fields to track mounting events for samples. Updated models, schemas, and front-end components to support dynamic calculation and display of these counts. Enhanced backend queries and API responses to include the new data.
2025-01-20 13:04:20 +01:00
3b315f2997 Add mount_count and unmount_count tracking for samples
Introduced `mount_count` and `unmount_count` fields to track mounting events for samples. Updated models, schemas, and front-end components to support dynamic calculation and display of these counts. Enhanced backend queries and API responses to include the new data.
2025-01-20 11:02:56 +01:00
3d804c1635 Update logistics data display and dewar event handling
Renamed "Retrieved Timestamp" to "Last Event" for clarity in the UI. Improved backend logic to handle dewar events, including associating refill events with specific slots and retrieving the last slot ID for new events.
2025-01-17 15:59:49 +01:00
6825421f20 Update package-lock.json with latest dependency versions
Upgraded multiple dependencies across Babel, Emotion, ESLint, and DevExpress packages in `package-lock.json` to their latest versions. These updates ensure compatibility, fix minor issues, and improve overall performance and security.
2025-01-17 15:35:29 +01:00
9739b8cfe9 Make shipment fields optional and refactor test scripts.
Updated the `number_of_pucks` and `number_of_samples` fields in the `schemas.py` to be optional for greater flexibility. Simplified the test Jupyter Notebook by restructuring imports and consolidating function calls for better readability and maintainability.
2025-01-17 09:36:16 +01:00
481068603b Enhance deletion processes with event-check validations.
Added validation to prevent deletion of shipments, dewars, pucks, or samples if they have associated events. Updated frontend components to handle and display error messages based on API responses for improved user feedback.
2025-01-15 15:30:54 +01:00
e63af3e66d ```
Add duplicate detection for spreadsheet data processing

Implemented logic to detect and handle duplicate 'positioninpuck' entries within the same puck during spreadsheet processing. Updated backend to validate duplicates and provide detailed error messages. Enhanced frontend to visually highlight duplicate errors and allow better user feedback during cell editing.
```
2025-01-15 14:23:51 +01:00
7861082a02 Set default values for empty "priority" column in spreadsheets.
Added logic to assign a default value of 1 to empty "priority" fields in the spreadsheet service. Adjusted the router to correctly track columns explicitly marked as defaulted.
2025-01-14 22:18:14 +01:00
c0951292d0 Refactor spreadsheet handling to track corrections and defaults
Improved the backend's value cleaning to differentiate between corrections and defaults, logging metadata for clearer traceability. Updated frontend to display corrected/defaulted fields with visual cues and tooltips for better user feedback. Enhanced data models and response structures to support this richer metadata.
2025-01-14 21:46:11 +01:00
f6c19cc4da Refactor spreadsheet processing to improve validation logic
Enhanced value cleaning and validation for spreadsheet data with dynamic handling of columns and corrections. Improved feedback for users with detailed error messages and visual indicators for corrected or defaulted values. Simplified backend and frontend logic for better maintainability and usability.
2025-01-13 21:55:15 +01:00
19ef20e6b0 Fix type and handle missing dewar_id in sample router.
Updated puck_id type from str to int for better type consistency. Added a fallback value of -1 for pucks with missing dewar_id to prevent potential errors when querying pucks.
2025-01-10 13:39:10 +01:00
fa99e3fa63 Refactor response construction in sample endpoint.
Replaced direct return of `last_event` with an explicit construction of `SampleEventResponse`. This ensures clarity and better adherence to the response schema.
2025-01-10 12:02:49 +01:00
f233058070 Add image upload endpoint and fix puck location handling
Introduced `/samples/{sample_id}/upload-images` API for uploading images tied to samples, validating file types, and saving them in structured directories. Fixed `puck_location_in_dewar` type handling in puck routes. Updated project version in `pyproject.toml`.
2025-01-10 11:31:51 +01:00
d6910411f1 Add default values to optional fields in SampleUpdate 2025-01-10 10:44:03 +01:00
1e766fa620 Add default values to optional fields in SampleUpdate 2025-01-10 10:00:14 +01:00
0f6759e417 Add default values to optional fields in SampleUpdate 2025-01-09 22:51:26 +01:00
ac38bc3bb6 Refactor puck handling for responses
Revised and optimized the `get_pucks_with_tell_position` endpoint to streamline logic and enhance clarity.
2025-01-09 20:36:03 +01:00
c45a46b07b Add example scripts and enhance puck event queries
Introduced a new Jupyter Notebook with API usage examples for managing pucks and samples. Refactored puck retrieval logic to include the latest event type and `tell_position`, improving data accuracy. Updated backend version to 0.1.0a16 accordingly.
2025-01-09 16:56:38 +01:00
9bfcc30981 Refactor dewar and sample handling; improve grid data binding
Updated Dewar and Sample schemas, added nested relationships, and adjusted API responses for better data handling. Simplified puck normalization, enhanced data grid logic in the frontend, and implemented a PUT endpoint for updating samples. Incremented backend version to 0.1.0a15 and added new HTTP request example.
2025-01-09 13:01:52 +01:00
a9cb7a41b0 Refactor set_tell_positions logic with updated rules.
Revised the set_tell_positions endpoint to handle updated business rules for puck positioning. Improved event handling to ensure proper nullification, updates, and removal of tell_positions based on the provided payload. Enhanced query performance and normalized puck name processing for consistency.
2025-01-09 09:44:59 +01:00
0fdd5e54b7 Refactor set_tell_positions logic with updated rules.
Revised the set_tell_positions endpoint to handle updated business rules for puck positioning. Improved event handling to ensure proper nullification, updates, and removal of tell_positions based on the provided payload. Enhanced query performance and normalized puck name processing for consistency.
2025-01-08 17:01:42 +01:00
fb5e930096 Refactor set_tell_positions logic with updated rules.
Revised the set_tell_positions endpoint to handle updated business rules for puck positioning. Improved event handling to ensure proper nullification, updates, and removal of tell_positions based on the provided payload. Enhanced query performance and normalized puck name processing for consistency.
2025-01-08 16:59:46 +01:00
6c91bc78da Refactor set_tell_positions logic with updated rules.
Revised the set_tell_positions endpoint to handle updated business rules for puck positioning. Improved event handling to ensure proper nullification, updates, and removal of tell_positions based on the provided payload. Enhanced query performance and normalized puck name processing for consistency.
2025-01-08 15:18:08 +01:00
4f73f41717 Refactor and extend puck handling with tell_position updates
Refactored puck updating logic to use Pydantic models for validation and normalization. Added a new endpoint to retrieve all pucks with a tell_position and their associated samples. Updated project version to 0.1.0a11 in pyproject.toml.
2025-01-08 14:11:34 +01:00
6d67d02259 Expand sample data handling and grid display.
Integrated additional sample parameters into backend and frontend for enhanced data collection. Updated pyproject version to reflect these changes. This improves user interface flexibility and enriches displayed sample metadata.
2025-01-08 09:52:15 +01:00
9b4f8599f3 Add support for data collection parameters across layers
Introduced serialization for `data_collection_parameters` in backend models and processing. Added logic to parse and attach data collection parameters in the frontend. This ensures consistent handling and storage of these parameters throughout the application.
2025-01-08 09:19:23 +01:00
35369fd13c Add column type mapping and enhance validation
Introduced a backend mapping for column expected types, improving validation and error handling. Updated UI to highlight default and corrected values, with additional detailed validation for data collection parameters.
2025-01-07 16:07:13 +01:00
92306fcfa6 Add column type mapping and enhance validation
Introduced a backend mapping for column expected types, improving validation and error handling. Updated UI to highlight default and corrected values, with additional detailed validation for data collection parameters.
2025-01-07 15:45:08 +01:00