**Commit Message:**
Enhance app with active pgroup handling and token updates Added active pgroup state management across the app for user-specific settings. Improved token handling with decoding, saving user data, and setting OpenAPI authorization. Updated components, API calls, and forms to support dynamic pgroup selection and user-specific features.
This commit is contained in:
GotthardG
@ -6,20 +6,20 @@
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"metadata": {
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"collapsed": true,
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"ExecuteTime": {
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"end_time": "2025-01-17T14:03:52.460891Z",
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"start_time": "2025-01-17T14:03:52.454842Z"
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"end_time": "2025-01-20T14:44:37.526742Z",
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"start_time": "2025-01-20T14:44:37.522704Z"
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}
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},
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"source": [
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"import json\n",
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"\n",
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"from nbclient.client import timestamp\n",
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"#from nbclient.client import timestamp\n",
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"\n",
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"import backend.aareDBclient as aareDBclient\n",
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"from aareDBclient.rest import ApiException\n",
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"from pprint import pprint\n",
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"\n",
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"from app.data.data import sample\n",
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"#from app.data.data import sample\n",
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"\n",
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"#from aareDBclient import SamplesApi, ShipmentsApi, PucksApi\n",
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"#from aareDBclient.models import SampleEventCreate, SetTellPosition\n",
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@ -47,13 +47,13 @@
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]
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}
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],
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"execution_count": 40
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"execution_count": 2
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},
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{
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"metadata": {
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"ExecuteTime": {
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"end_time": "2025-01-17T14:13:16.559702Z",
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"start_time": "2025-01-17T14:13:16.446021Z"
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"end_time": "2025-01-20T14:44:58.875370Z",
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"start_time": "2025-01-20T14:44:58.805520Z"
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}
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},
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"cell_type": "code",
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@ -152,7 +152,7 @@
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]
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}
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],
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"execution_count": 44
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"execution_count": 3
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},
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{
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"metadata": {
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@ -456,8 +456,8 @@
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{
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"metadata": {
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"ExecuteTime": {
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"end_time": "2025-01-20T11:10:20.017201Z",
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"start_time": "2025-01-20T11:10:19.953940Z"
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"end_time": "2025-01-20T14:45:11.812597Z",
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"start_time": "2025-01-20T14:45:11.793309Z"
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}
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},
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"cell_type": "code",
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@ -503,7 +503,9 @@
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"output_type": "stream",
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"text": [
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"Payload being sent to API:\n",
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"{\"event_type\":\"Mounted\"}\n"
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"{\"event_type\":\"Mounted\"}\n",
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"API response:\n",
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"Sample(id=433, sample_name='Dtpase_1', position=1, puck_id=44, crystalname=None, proteinname=None, positioninpuck=None, priority=1, comments=None, data_collection_parameters=DataCollectionParameters(directory='{sgPuck}/{sgPosition}', oscillation=None, exposure=None, totalrange=None, transmission=None, targetresolution=None, aperture=None, datacollectiontype=None, processingpipeline='', spacegroupnumber=None, cellparameters=None, rescutkey=None, rescutvalue=None, userresolution=None, pdbid='', autoprocfull=False, procfull=False, adpenabled=False, noano=False, ffcscampaign=False, trustedhigh=None, autoprocextraparams=None, chiphiangles=None, dose=None), events=[SampleEventResponse(id=386, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 35, 38)), SampleEventResponse(id=387, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 40, 11)), SampleEventResponse(id=388, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 45, 4)), SampleEventResponse(id=389, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 45, 24)), SampleEventResponse(id=390, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 50, 38)), SampleEventResponse(id=391, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 52, 28)), SampleEventResponse(id=392, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 12, 10, 20)), SampleEventResponse(id=393, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 13, 39, 24)), SampleEventResponse(id=394, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 15, 45, 12))], mount_count=9, unmount_count=0)\n"
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]
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},
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{
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@ -513,29 +515,9 @@
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"/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/urllib3/connectionpool.py:1097: InsecureRequestWarning: Unverified HTTPS request is being made to host '127.0.0.1'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#tls-warnings\n",
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" warnings.warn(\n"
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]
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},
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{
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"ename": "ValidationError",
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"evalue": "3 validation errors for SampleEventResponse\nsample_id\n Input should be a valid integer [type=int_type, input_value=None, input_type=NoneType]\n For further information visit https://errors.pydantic.dev/2.9/v/int_type\nevent_type\n Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n For further information visit https://errors.pydantic.dev/2.9/v/string_type\ntimestamp\n Input should be a valid datetime [type=datetime_type, input_value=None, input_type=NoneType]\n For further information visit https://errors.pydantic.dev/2.9/v/datetime_type",
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"output_type": "error",
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"traceback": [
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"\u001B[0;31m---------------------------------------------------------------------------\u001B[0m",
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"\u001B[0;31mValidationError\u001B[0m Traceback (most recent call last)",
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"Cell \u001B[0;32mIn[110], line 21\u001B[0m\n\u001B[1;32m 18\u001B[0m \u001B[38;5;28mprint\u001B[39m(sample_event_create\u001B[38;5;241m.\u001B[39mjson()) \u001B[38;5;66;03m# Ensure it matches `SampleEventCreate`\u001B[39;00m\n\u001B[1;32m 20\u001B[0m \u001B[38;5;66;03m# Call the API\u001B[39;00m\n\u001B[0;32m---> 21\u001B[0m api_response \u001B[38;5;241m=\u001B[39m \u001B[43mapi_instance\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mcreate_sample_event_samples_samples_sample_id_events_post\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 22\u001B[0m \u001B[43m \u001B[49m\u001B[43msample_id\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[38;5;241;43m433\u001B[39;49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;66;43;03m# Ensure this matches a valid sample ID in the database\u001B[39;49;00m\n\u001B[1;32m 23\u001B[0m \u001B[43m \u001B[49m\u001B[43msample_event_create\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43msample_event_create\u001B[49m\n\u001B[1;32m 24\u001B[0m \u001B[43m\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 26\u001B[0m \u001B[38;5;28mprint\u001B[39m(\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mAPI response:\u001B[39m\u001B[38;5;124m\"\u001B[39m)\n\u001B[1;32m 27\u001B[0m pprint(api_response)\n",
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"File \u001B[0;32m/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/pydantic/validate_call_decorator.py:60\u001B[0m, in \u001B[0;36mvalidate_call.<locals>.validate.<locals>.wrapper_function\u001B[0;34m(*args, **kwargs)\u001B[0m\n\u001B[1;32m 58\u001B[0m \u001B[38;5;129m@functools\u001B[39m\u001B[38;5;241m.\u001B[39mwraps(function)\n\u001B[1;32m 59\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m\u001B[38;5;250m \u001B[39m\u001B[38;5;21mwrapper_function\u001B[39m(\u001B[38;5;241m*\u001B[39margs, \u001B[38;5;241m*\u001B[39m\u001B[38;5;241m*\u001B[39mkwargs):\n\u001B[0;32m---> 60\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[43mvalidate_call_wrapper\u001B[49m\u001B[43m(\u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43margs\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43mkwargs\u001B[49m\u001B[43m)\u001B[49m\n",
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"File \u001B[0;32m/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/pydantic/_internal/_validate_call.py:96\u001B[0m, in \u001B[0;36mValidateCallWrapper.__call__\u001B[0;34m(self, *args, **kwargs)\u001B[0m\n\u001B[1;32m 95\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m\u001B[38;5;250m \u001B[39m\u001B[38;5;21m__call__\u001B[39m(\u001B[38;5;28mself\u001B[39m, \u001B[38;5;241m*\u001B[39margs: Any, \u001B[38;5;241m*\u001B[39m\u001B[38;5;241m*\u001B[39mkwargs: Any) \u001B[38;5;241m-\u001B[39m\u001B[38;5;241m>\u001B[39m Any:\n\u001B[0;32m---> 96\u001B[0m res \u001B[38;5;241m=\u001B[39m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43m__pydantic_validator__\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mvalidate_python\u001B[49m\u001B[43m(\u001B[49m\u001B[43mpydantic_core\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mArgsKwargs\u001B[49m\u001B[43m(\u001B[49m\u001B[43margs\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mkwargs\u001B[49m\u001B[43m)\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 97\u001B[0m \u001B[38;5;28;01mif\u001B[39;00m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39m__return_pydantic_validator__:\n\u001B[1;32m 98\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39m__return_pydantic_validator__(res)\n",
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"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api/samples_api.py:109\u001B[0m, in \u001B[0;36mSamplesApi.create_sample_event_samples_samples_sample_id_events_post\u001B[0;34m(self, sample_id, sample_event_create, _request_timeout, _request_auth, _content_type, _headers, _host_index)\u001B[0m\n\u001B[1;32m 104\u001B[0m response_data \u001B[38;5;241m=\u001B[39m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mapi_client\u001B[38;5;241m.\u001B[39mcall_api(\n\u001B[1;32m 105\u001B[0m \u001B[38;5;241m*\u001B[39m_param,\n\u001B[1;32m 106\u001B[0m _request_timeout\u001B[38;5;241m=\u001B[39m_request_timeout\n\u001B[1;32m 107\u001B[0m )\n\u001B[1;32m 108\u001B[0m response_data\u001B[38;5;241m.\u001B[39mread()\n\u001B[0;32m--> 109\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mapi_client\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mresponse_deserialize\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 110\u001B[0m \u001B[43m \u001B[49m\u001B[43mresponse_data\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43mresponse_data\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 111\u001B[0m \u001B[43m \u001B[49m\u001B[43mresponse_types_map\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_response_types_map\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 112\u001B[0m \u001B[43m\u001B[49m\u001B[43m)\u001B[49m\u001B[38;5;241m.\u001B[39mdata\n",
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"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api_client.py:319\u001B[0m, in \u001B[0;36mApiClient.response_deserialize\u001B[0;34m(self, response_data, response_types_map)\u001B[0m\n\u001B[1;32m 317\u001B[0m encoding \u001B[38;5;241m=\u001B[39m match\u001B[38;5;241m.\u001B[39mgroup(\u001B[38;5;241m1\u001B[39m) \u001B[38;5;28;01mif\u001B[39;00m match \u001B[38;5;28;01melse\u001B[39;00m \u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mutf-8\u001B[39m\u001B[38;5;124m\"\u001B[39m\n\u001B[1;32m 318\u001B[0m response_text \u001B[38;5;241m=\u001B[39m response_data\u001B[38;5;241m.\u001B[39mdata\u001B[38;5;241m.\u001B[39mdecode(encoding)\n\u001B[0;32m--> 319\u001B[0m return_data \u001B[38;5;241m=\u001B[39m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mdeserialize\u001B[49m\u001B[43m(\u001B[49m\u001B[43mresponse_text\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mresponse_type\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mcontent_type\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 320\u001B[0m \u001B[38;5;28;01mfinally\u001B[39;00m:\n\u001B[1;32m 321\u001B[0m \u001B[38;5;28;01mif\u001B[39;00m \u001B[38;5;129;01mnot\u001B[39;00m \u001B[38;5;241m200\u001B[39m \u001B[38;5;241m<\u001B[39m\u001B[38;5;241m=\u001B[39m response_data\u001B[38;5;241m.\u001B[39mstatus \u001B[38;5;241m<\u001B[39m\u001B[38;5;241m=\u001B[39m \u001B[38;5;241m299\u001B[39m:\n",
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"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api_client.py:420\u001B[0m, in \u001B[0;36mApiClient.deserialize\u001B[0;34m(self, response_text, response_type, content_type)\u001B[0m\n\u001B[1;32m 414\u001B[0m \u001B[38;5;28;01melse\u001B[39;00m:\n\u001B[1;32m 415\u001B[0m \u001B[38;5;28;01mraise\u001B[39;00m ApiException(\n\u001B[1;32m 416\u001B[0m status\u001B[38;5;241m=\u001B[39m\u001B[38;5;241m0\u001B[39m,\n\u001B[1;32m 417\u001B[0m reason\u001B[38;5;241m=\u001B[39m\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mUnsupported content type: \u001B[39m\u001B[38;5;132;01m{0}\u001B[39;00m\u001B[38;5;124m\"\u001B[39m\u001B[38;5;241m.\u001B[39mformat(content_type)\n\u001B[1;32m 418\u001B[0m )\n\u001B[0;32m--> 420\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43m__deserialize\u001B[49m\u001B[43m(\u001B[49m\u001B[43mdata\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mresponse_type\u001B[49m\u001B[43m)\u001B[49m\n",
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"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api_client.py:467\u001B[0m, in \u001B[0;36mApiClient.__deserialize\u001B[0;34m(self, data, klass)\u001B[0m\n\u001B[1;32m 465\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39m__deserialize_enum(data, klass)\n\u001B[1;32m 466\u001B[0m \u001B[38;5;28;01melse\u001B[39;00m:\n\u001B[0;32m--> 467\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43m__deserialize_model\u001B[49m\u001B[43m(\u001B[49m\u001B[43mdata\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mklass\u001B[49m\u001B[43m)\u001B[49m\n",
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"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api_client.py:788\u001B[0m, in \u001B[0;36mApiClient.__deserialize_model\u001B[0;34m(self, data, klass)\u001B[0m\n\u001B[1;32m 780\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m\u001B[38;5;250m \u001B[39m\u001B[38;5;21m__deserialize_model\u001B[39m(\u001B[38;5;28mself\u001B[39m, data, klass):\n\u001B[1;32m 781\u001B[0m \u001B[38;5;250m \u001B[39m\u001B[38;5;124;03m\"\"\"Deserializes list or dict to model.\u001B[39;00m\n\u001B[1;32m 782\u001B[0m \n\u001B[1;32m 783\u001B[0m \u001B[38;5;124;03m :param data: dict, list.\u001B[39;00m\n\u001B[1;32m 784\u001B[0m \u001B[38;5;124;03m :param klass: class literal.\u001B[39;00m\n\u001B[1;32m 785\u001B[0m \u001B[38;5;124;03m :return: model object.\u001B[39;00m\n\u001B[1;32m 786\u001B[0m \u001B[38;5;124;03m \"\"\"\u001B[39;00m\n\u001B[0;32m--> 788\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[43mklass\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mfrom_dict\u001B[49m\u001B[43m(\u001B[49m\u001B[43mdata\u001B[49m\u001B[43m)\u001B[49m\n",
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"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/models/sample_event_response.py:86\u001B[0m, in \u001B[0;36mSampleEventResponse.from_dict\u001B[0;34m(cls, obj)\u001B[0m\n\u001B[1;32m 83\u001B[0m \u001B[38;5;28;01mif\u001B[39;00m \u001B[38;5;129;01mnot\u001B[39;00m \u001B[38;5;28misinstance\u001B[39m(obj, \u001B[38;5;28mdict\u001B[39m):\n\u001B[1;32m 84\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28mcls\u001B[39m\u001B[38;5;241m.\u001B[39mmodel_validate(obj)\n\u001B[0;32m---> 86\u001B[0m _obj \u001B[38;5;241m=\u001B[39m \u001B[38;5;28;43mcls\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mmodel_validate\u001B[49m\u001B[43m(\u001B[49m\u001B[43m{\u001B[49m\n\u001B[1;32m 87\u001B[0m \u001B[43m \u001B[49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[38;5;124;43mid\u001B[39;49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[43m:\u001B[49m\u001B[43m \u001B[49m\u001B[43mobj\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mget\u001B[49m\u001B[43m(\u001B[49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[38;5;124;43mid\u001B[39;49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[43m)\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 88\u001B[0m \u001B[43m \u001B[49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[38;5;124;43msample_id\u001B[39;49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[43m:\u001B[49m\u001B[43m \u001B[49m\u001B[43mobj\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mget\u001B[49m\u001B[43m(\u001B[49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[38;5;124;43msample_id\u001B[39;49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[43m)\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 89\u001B[0m \u001B[43m \u001B[49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[38;5;124;43mevent_type\u001B[39;49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[43m:\u001B[49m\u001B[43m \u001B[49m\u001B[43mobj\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mget\u001B[49m\u001B[43m(\u001B[49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[38;5;124;43mevent_type\u001B[39;49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[43m)\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 90\u001B[0m \u001B[43m \u001B[49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[38;5;124;43mtimestamp\u001B[39;49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[43m:\u001B[49m\u001B[43m \u001B[49m\u001B[43mobj\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mget\u001B[49m\u001B[43m(\u001B[49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[38;5;124;43mtimestamp\u001B[39;49m\u001B[38;5;124;43m\"\u001B[39;49m\u001B[43m)\u001B[49m\n\u001B[1;32m 91\u001B[0m \u001B[43m\u001B[49m\u001B[43m}\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 92\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m _obj\n",
|
||||
"File \u001B[0;32m/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/pydantic/main.py:596\u001B[0m, in \u001B[0;36mBaseModel.model_validate\u001B[0;34m(cls, obj, strict, from_attributes, context)\u001B[0m\n\u001B[1;32m 594\u001B[0m \u001B[38;5;66;03m# `__tracebackhide__` tells pytest and some other tools to omit this function from tracebacks\u001B[39;00m\n\u001B[1;32m 595\u001B[0m __tracebackhide__ \u001B[38;5;241m=\u001B[39m \u001B[38;5;28;01mTrue\u001B[39;00m\n\u001B[0;32m--> 596\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28;43mcls\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43m__pydantic_validator__\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mvalidate_python\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 597\u001B[0m \u001B[43m \u001B[49m\u001B[43mobj\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mstrict\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43mstrict\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mfrom_attributes\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43mfrom_attributes\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mcontext\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43mcontext\u001B[49m\n\u001B[1;32m 598\u001B[0m \u001B[43m\u001B[49m\u001B[43m)\u001B[49m\n",
|
||||
"\u001B[0;31mValidationError\u001B[0m: 3 validation errors for SampleEventResponse\nsample_id\n Input should be a valid integer [type=int_type, input_value=None, input_type=NoneType]\n For further information visit https://errors.pydantic.dev/2.9/v/int_type\nevent_type\n Input should be a valid string [type=string_type, input_value=None, input_type=NoneType]\n For further information visit https://errors.pydantic.dev/2.9/v/string_type\ntimestamp\n Input should be a valid datetime [type=datetime_type, input_value=None, input_type=NoneType]\n For further information visit https://errors.pydantic.dev/2.9/v/datetime_type"
|
||||
]
|
||||
}
|
||||
],
|
||||
"execution_count": 110
|
||||
"execution_count": 4
|
||||
},
|
||||
{
|
||||
"metadata": {
|
||||
@ -575,6 +557,126 @@
|
||||
}
|
||||
],
|
||||
"execution_count": 7
|
||||
},
|
||||
{
|
||||
"metadata": {
|
||||
"ExecuteTime": {
|
||||
"end_time": "2025-01-20T15:43:54.575154Z",
|
||||
"start_time": "2025-01-20T15:43:54.539295Z"
|
||||
}
|
||||
},
|
||||
"cell_type": "code",
|
||||
"source": [
|
||||
"from aareDBclient import ApiClient, SamplesApi # Import the appropriate client\n",
|
||||
"from aareDBclient.rest import ApiException\n",
|
||||
"import mimetypes\n",
|
||||
"\n",
|
||||
"# File path to the image\n",
|
||||
"file_path = \"backend/tests/sample_image/IMG_1942.jpg\"\n",
|
||||
"\n",
|
||||
"# Sample ID\n",
|
||||
"sample_id = 433 # Replace with a valid sample_id from your FastAPI backend\n",
|
||||
"\n",
|
||||
"# Initialize the API client\n",
|
||||
"with ApiClient(configuration) as api_client:\n",
|
||||
" api_instance = SamplesApi(api_client) # Adjust as per your API structure\n",
|
||||
"\n",
|
||||
" try:\n",
|
||||
" # Open the file and read as binary\n",
|
||||
" with open(file_path, \"rb\") as file:\n",
|
||||
" # Get the MIME type for the file\n",
|
||||
" mime_type, _ = mimetypes.guess_type(file_path)\n",
|
||||
"\n",
|
||||
" # Call the API method for uploading sample images\n",
|
||||
" response = api_instance.upload_sample_images_samples_samples_sample_id_upload_images_post(\n",
|
||||
" sample_id=sample_id,\n",
|
||||
" uploaded_files=[file.read()] # Pass raw bytes as a list\n",
|
||||
" )\n",
|
||||
"\n",
|
||||
" # Print the response from the API\n",
|
||||
" print(\"API Response:\")\n",
|
||||
" print(response)\n",
|
||||
"\n",
|
||||
" except ApiException as e:\n",
|
||||
" # Handle API exception gracefully\n",
|
||||
" print(\"Exception occurred while uploading the file:\")\n",
|
||||
" print(f\"Status Code: {e.status}\")\n",
|
||||
" if e.body:\n",
|
||||
" print(f\"Error Details: {e.body}\")"
|
||||
],
|
||||
"id": "40404614d1a63f95",
|
||||
"outputs": [
|
||||
{
|
||||
"ename": "ValueError",
|
||||
"evalue": "Unsupported file value",
|
||||
"output_type": "error",
|
||||
"traceback": [
|
||||
"\u001B[0;31m---------------------------------------------------------------------------\u001B[0m",
|
||||
"\u001B[0;31mValueError\u001B[0m Traceback (most recent call last)",
|
||||
"Cell \u001B[0;32mIn[77], line 22\u001B[0m\n\u001B[1;32m 19\u001B[0m mime_type, _ \u001B[38;5;241m=\u001B[39m mimetypes\u001B[38;5;241m.\u001B[39mguess_type(file_path)\n\u001B[1;32m 21\u001B[0m \u001B[38;5;66;03m# Call the API method for uploading sample images\u001B[39;00m\n\u001B[0;32m---> 22\u001B[0m response \u001B[38;5;241m=\u001B[39m \u001B[43mapi_instance\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mupload_sample_images_samples_samples_sample_id_upload_images_post\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 23\u001B[0m \u001B[43m \u001B[49m\u001B[43msample_id\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43msample_id\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 24\u001B[0m \u001B[43m \u001B[49m\u001B[43muploaded_files\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m[\u001B[49m\u001B[43mfile\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mread\u001B[49m\u001B[43m(\u001B[49m\u001B[43m)\u001B[49m\u001B[43m]\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;66;43;03m# Pass raw bytes as a list\u001B[39;49;00m\n\u001B[1;32m 25\u001B[0m \u001B[43m\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 27\u001B[0m \u001B[38;5;66;03m# Print the response from the API\u001B[39;00m\n\u001B[1;32m 28\u001B[0m \u001B[38;5;28mprint\u001B[39m(\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mAPI Response:\u001B[39m\u001B[38;5;124m\"\u001B[39m)\n",
|
||||
"File \u001B[0;32m/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/pydantic/validate_call_decorator.py:60\u001B[0m, in \u001B[0;36mvalidate_call.<locals>.validate.<locals>.wrapper_function\u001B[0;34m(*args, **kwargs)\u001B[0m\n\u001B[1;32m 58\u001B[0m \u001B[38;5;129m@functools\u001B[39m\u001B[38;5;241m.\u001B[39mwraps(function)\n\u001B[1;32m 59\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m\u001B[38;5;250m \u001B[39m\u001B[38;5;21mwrapper_function\u001B[39m(\u001B[38;5;241m*\u001B[39margs, \u001B[38;5;241m*\u001B[39m\u001B[38;5;241m*\u001B[39mkwargs):\n\u001B[0;32m---> 60\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[43mvalidate_call_wrapper\u001B[49m\u001B[43m(\u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43margs\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43mkwargs\u001B[49m\u001B[43m)\u001B[49m\n",
|
||||
"File \u001B[0;32m/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/pydantic/_internal/_validate_call.py:96\u001B[0m, in \u001B[0;36mValidateCallWrapper.__call__\u001B[0;34m(self, *args, **kwargs)\u001B[0m\n\u001B[1;32m 95\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m\u001B[38;5;250m \u001B[39m\u001B[38;5;21m__call__\u001B[39m(\u001B[38;5;28mself\u001B[39m, \u001B[38;5;241m*\u001B[39margs: Any, \u001B[38;5;241m*\u001B[39m\u001B[38;5;241m*\u001B[39mkwargs: Any) \u001B[38;5;241m-\u001B[39m\u001B[38;5;241m>\u001B[39m Any:\n\u001B[0;32m---> 96\u001B[0m res \u001B[38;5;241m=\u001B[39m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43m__pydantic_validator__\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mvalidate_python\u001B[49m\u001B[43m(\u001B[49m\u001B[43mpydantic_core\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mArgsKwargs\u001B[49m\u001B[43m(\u001B[49m\u001B[43margs\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mkwargs\u001B[49m\u001B[43m)\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 97\u001B[0m \u001B[38;5;28;01mif\u001B[39;00m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39m__return_pydantic_validator__:\n\u001B[1;32m 98\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39m__return_pydantic_validator__(res)\n",
|
||||
"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api/samples_api.py:875\u001B[0m, in \u001B[0;36mSamplesApi.upload_sample_images_samples_samples_sample_id_upload_images_post\u001B[0;34m(self, sample_id, uploaded_files, _request_timeout, _request_auth, _content_type, _headers, _host_index)\u001B[0m\n\u001B[1;32m 827\u001B[0m \u001B[38;5;129m@validate_call\u001B[39m\n\u001B[1;32m 828\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m\u001B[38;5;250m \u001B[39m\u001B[38;5;21mupload_sample_images_samples_samples_sample_id_upload_images_post\u001B[39m(\n\u001B[1;32m 829\u001B[0m \u001B[38;5;28mself\u001B[39m,\n\u001B[0;32m (...)\u001B[0m\n\u001B[1;32m 843\u001B[0m _host_index: Annotated[StrictInt, Field(ge\u001B[38;5;241m=\u001B[39m\u001B[38;5;241m0\u001B[39m, le\u001B[38;5;241m=\u001B[39m\u001B[38;5;241m0\u001B[39m)] \u001B[38;5;241m=\u001B[39m \u001B[38;5;241m0\u001B[39m,\n\u001B[1;32m 844\u001B[0m ) \u001B[38;5;241m-\u001B[39m\u001B[38;5;241m>\u001B[39m \u001B[38;5;28mobject\u001B[39m:\n\u001B[1;32m 845\u001B[0m \u001B[38;5;250m \u001B[39m\u001B[38;5;124;03m\"\"\"Upload Sample Images\u001B[39;00m\n\u001B[1;32m 846\u001B[0m \n\u001B[1;32m 847\u001B[0m \u001B[38;5;124;03m Uploads images for a sample and stores them in a directory structure: images/user/date/dewar_name/puck_name/position/. Args: sample_id (int): ID of the sample. uploaded_files (Union[List[UploadFile], List[bytes]]): List of image files (as UploadFile or raw bytes). db (Session): SQLAlchemy database session.\u001B[39;00m\n\u001B[0;32m (...)\u001B[0m\n\u001B[1;32m 872\u001B[0m \u001B[38;5;124;03m :return: Returns the result object.\u001B[39;00m\n\u001B[1;32m 873\u001B[0m \u001B[38;5;124;03m \"\"\"\u001B[39;00m \u001B[38;5;66;03m# noqa: E501\u001B[39;00m\n\u001B[0;32m--> 875\u001B[0m _param \u001B[38;5;241m=\u001B[39m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43m_upload_sample_images_samples_samples_sample_id_upload_images_post_serialize\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 876\u001B[0m \u001B[43m \u001B[49m\u001B[43msample_id\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43msample_id\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 877\u001B[0m \u001B[43m \u001B[49m\u001B[43muploaded_files\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43muploaded_files\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 878\u001B[0m \u001B[43m \u001B[49m\u001B[43m_request_auth\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_request_auth\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 879\u001B[0m \u001B[43m \u001B[49m\u001B[43m_content_type\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_content_type\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 880\u001B[0m \u001B[43m \u001B[49m\u001B[43m_headers\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_headers\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 881\u001B[0m \u001B[43m \u001B[49m\u001B[43m_host_index\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_host_index\u001B[49m\n\u001B[1;32m 882\u001B[0m \u001B[43m \u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 884\u001B[0m _response_types_map: Dict[\u001B[38;5;28mstr\u001B[39m, Optional[\u001B[38;5;28mstr\u001B[39m]] \u001B[38;5;241m=\u001B[39m {\n\u001B[1;32m 885\u001B[0m \u001B[38;5;124m'\u001B[39m\u001B[38;5;124m200\u001B[39m\u001B[38;5;124m'\u001B[39m: \u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mobject\u001B[39m\u001B[38;5;124m\"\u001B[39m,\n\u001B[1;32m 886\u001B[0m \u001B[38;5;124m'\u001B[39m\u001B[38;5;124m422\u001B[39m\u001B[38;5;124m'\u001B[39m: \u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mHTTPValidationError\u001B[39m\u001B[38;5;124m\"\u001B[39m,\n\u001B[1;32m 887\u001B[0m }\n\u001B[1;32m 888\u001B[0m response_data \u001B[38;5;241m=\u001B[39m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mapi_client\u001B[38;5;241m.\u001B[39mcall_api(\n\u001B[1;32m 889\u001B[0m \u001B[38;5;241m*\u001B[39m_param,\n\u001B[1;32m 890\u001B[0m _request_timeout\u001B[38;5;241m=\u001B[39m_request_timeout\n\u001B[1;32m 891\u001B[0m )\n",
|
||||
"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api/samples_api.py:1099\u001B[0m, in \u001B[0;36mSamplesApi._upload_sample_images_samples_samples_sample_id_upload_images_post_serialize\u001B[0;34m(self, sample_id, uploaded_files, _request_auth, _content_type, _headers, _host_index)\u001B[0m\n\u001B[1;32m 1095\u001B[0m \u001B[38;5;66;03m# authentication setting\u001B[39;00m\n\u001B[1;32m 1096\u001B[0m _auth_settings: List[\u001B[38;5;28mstr\u001B[39m] \u001B[38;5;241m=\u001B[39m [\n\u001B[1;32m 1097\u001B[0m ]\n\u001B[0;32m-> 1099\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mapi_client\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mparam_serialize\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 1100\u001B[0m \u001B[43m \u001B[49m\u001B[43mmethod\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[38;5;124;43m'\u001B[39;49m\u001B[38;5;124;43mPOST\u001B[39;49m\u001B[38;5;124;43m'\u001B[39;49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1101\u001B[0m \u001B[43m \u001B[49m\u001B[43mresource_path\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[38;5;124;43m'\u001B[39;49m\u001B[38;5;124;43m/samples/samples/\u001B[39;49m\u001B[38;5;132;43;01m{sample_id}\u001B[39;49;00m\u001B[38;5;124;43m/upload-images\u001B[39;49m\u001B[38;5;124;43m'\u001B[39;49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1102\u001B[0m \u001B[43m \u001B[49m\u001B[43mpath_params\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_path_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1103\u001B[0m \u001B[43m \u001B[49m\u001B[43mquery_params\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_query_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1104\u001B[0m \u001B[43m \u001B[49m\u001B[43mheader_params\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_header_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1105\u001B[0m \u001B[43m \u001B[49m\u001B[43mbody\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_body_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1106\u001B[0m \u001B[43m \u001B[49m\u001B[43mpost_params\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_form_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1107\u001B[0m \u001B[43m \u001B[49m\u001B[43mfiles\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_files\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1108\u001B[0m \u001B[43m \u001B[49m\u001B[43mauth_settings\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_auth_settings\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1109\u001B[0m \u001B[43m \u001B[49m\u001B[43mcollection_formats\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_collection_formats\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1110\u001B[0m \u001B[43m \u001B[49m\u001B[43m_host\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_host\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1111\u001B[0m \u001B[43m \u001B[49m\u001B[43m_request_auth\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_request_auth\u001B[49m\n\u001B[1;32m 1112\u001B[0m \u001B[43m\u001B[49m\u001B[43m)\u001B[49m\n",
|
||||
"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api_client.py:214\u001B[0m, in \u001B[0;36mApiClient.param_serialize\u001B[0;34m(self, method, resource_path, path_params, query_params, header_params, body, post_params, files, auth_settings, collection_formats, _host, _request_auth)\u001B[0m\n\u001B[1;32m 209\u001B[0m post_params \u001B[38;5;241m=\u001B[39m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mparameters_to_tuples(\n\u001B[1;32m 210\u001B[0m post_params,\n\u001B[1;32m 211\u001B[0m collection_formats\n\u001B[1;32m 212\u001B[0m )\n\u001B[1;32m 213\u001B[0m \u001B[38;5;28;01mif\u001B[39;00m files:\n\u001B[0;32m--> 214\u001B[0m post_params\u001B[38;5;241m.\u001B[39mextend(\u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mfiles_parameters\u001B[49m\u001B[43m(\u001B[49m\u001B[43mfiles\u001B[49m\u001B[43m)\u001B[49m)\n\u001B[1;32m 216\u001B[0m \u001B[38;5;66;03m# auth setting\u001B[39;00m\n\u001B[1;32m 217\u001B[0m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mupdate_params_for_auth(\n\u001B[1;32m 218\u001B[0m header_params,\n\u001B[1;32m 219\u001B[0m query_params,\n\u001B[0;32m (...)\u001B[0m\n\u001B[1;32m 224\u001B[0m request_auth\u001B[38;5;241m=\u001B[39m_request_auth\n\u001B[1;32m 225\u001B[0m )\n",
|
||||
"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api_client.py:554\u001B[0m, in \u001B[0;36mApiClient.files_parameters\u001B[0;34m(self, files)\u001B[0m\n\u001B[1;32m 552\u001B[0m filedata \u001B[38;5;241m=\u001B[39m v\n\u001B[1;32m 553\u001B[0m \u001B[38;5;28;01melse\u001B[39;00m:\n\u001B[0;32m--> 554\u001B[0m \u001B[38;5;28;01mraise\u001B[39;00m \u001B[38;5;167;01mValueError\u001B[39;00m(\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mUnsupported file value\u001B[39m\u001B[38;5;124m\"\u001B[39m)\n\u001B[1;32m 555\u001B[0m mimetype \u001B[38;5;241m=\u001B[39m (\n\u001B[1;32m 556\u001B[0m mimetypes\u001B[38;5;241m.\u001B[39mguess_type(filename)[\u001B[38;5;241m0\u001B[39m]\n\u001B[1;32m 557\u001B[0m \u001B[38;5;129;01mor\u001B[39;00m \u001B[38;5;124m'\u001B[39m\u001B[38;5;124mapplication/octet-stream\u001B[39m\u001B[38;5;124m'\u001B[39m\n\u001B[1;32m 558\u001B[0m )\n\u001B[1;32m 559\u001B[0m params\u001B[38;5;241m.\u001B[39mappend(\n\u001B[1;32m 560\u001B[0m \u001B[38;5;28mtuple\u001B[39m([k, \u001B[38;5;28mtuple\u001B[39m([filename, filedata, mimetype])])\n\u001B[1;32m 561\u001B[0m )\n",
|
||||
"\u001B[0;31mValueError\u001B[0m: Unsupported file value"
|
||||
]
|
||||
}
|
||||
],
|
||||
"execution_count": 77
|
||||
},
|
||||
{
|
||||
"metadata": {
|
||||
"ExecuteTime": {
|
||||
"end_time": "2025-01-20T15:14:51.219091Z",
|
||||
"start_time": "2025-01-20T15:14:51.216755Z"
|
||||
}
|
||||
},
|
||||
"cell_type": "code",
|
||||
"source": "help(api_instance.upload_sample_images_samples_samples_sample_id_upload_images_post)",
|
||||
"id": "8dd70634ffa5f37e",
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"Help on method upload_sample_images_samples_samples_sample_id_upload_images_post in module aareDBclient.api.samples_api:\n",
|
||||
"\n",
|
||||
"upload_sample_images_samples_samples_sample_id_upload_images_post(sample_id: Annotated[int, Strict(strict=True)], uploaded_files: List[Union[Annotated[bytes, Strict(strict=True)], Annotated[str, Strict(strict=True)]]], _request_timeout: Union[NoneType, Annotated[float, Strict(strict=True), FieldInfo(annotation=NoneType, required=True, metadata=[Gt(gt=0)])], Tuple[Annotated[float, Strict(strict=True), FieldInfo(annotation=NoneType, required=True, metadata=[Gt(gt=0)])], Annotated[float, Strict(strict=True), FieldInfo(annotation=NoneType, required=True, metadata=[Gt(gt=0)])]]] = None, _request_auth: Optional[Dict[Annotated[str, Strict(strict=True)], Any]] = None, _content_type: Optional[Annotated[str, Strict(strict=True)]] = None, _headers: Optional[Dict[Annotated[str, Strict(strict=True)], Any]] = None, _host_index: Annotated[int, Strict(strict=True), FieldInfo(annotation=NoneType, required=True, metadata=[Ge(ge=0), Le(le=0)])] = 0) -> object method of aareDBclient.api.samples_api.SamplesApi instance\n",
|
||||
" Upload Sample Images\n",
|
||||
"\n",
|
||||
" Uploads images for a sample and stores them in a directory structure: images/user/date/dewar_name/puck_name/position/. Args: sample_id (int): ID of the sample. uploaded_files (Union[List[UploadFile], List[bytes]]): List of image files (as UploadFile or raw bytes). db (Session): SQLAlchemy database session.\n",
|
||||
"\n",
|
||||
" :param sample_id: (required)\n",
|
||||
" :type sample_id: int\n",
|
||||
" :param uploaded_files: (required)\n",
|
||||
" :type uploaded_files: List[bytearray]\n",
|
||||
" :param _request_timeout: timeout setting for this request. If one\n",
|
||||
" number provided, it will be total request\n",
|
||||
" timeout. It can also be a pair (tuple) of\n",
|
||||
" (connection, read) timeouts.\n",
|
||||
" :type _request_timeout: int, tuple(int, int), optional\n",
|
||||
" :param _request_auth: set to override the auth_settings for an a single\n",
|
||||
" request; this effectively ignores the\n",
|
||||
" authentication in the spec for a single request.\n",
|
||||
" :type _request_auth: dict, optional\n",
|
||||
" :param _content_type: force content-type for the request.\n",
|
||||
" :type _content_type: str, Optional\n",
|
||||
" :param _headers: set to override the headers for a single\n",
|
||||
" request; this effectively ignores the headers\n",
|
||||
" in the spec for a single request.\n",
|
||||
" :type _headers: dict, optional\n",
|
||||
" :param _host_index: set to override the host_index for a single\n",
|
||||
" request; this effectively ignores the host_index\n",
|
||||
" in the spec for a single request.\n",
|
||||
" :type _host_index: int, optional\n",
|
||||
" :return: Returns the result object.\n",
|
||||
"\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"execution_count": 51
|
||||
}
|
||||
],
|
||||
"metadata": {
|
||||
|
||||
Reference in New Issue
Block a user