gotthard_g/aaredb
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity
aaredb/testfunctions.ipynb
GotthardG 6cde57f783 **Commit Message:** 
Enhance app with active pgroup handling and token updates

Added active pgroup state management across the app for user-specific settings. Improved token handling with decoding, saving user data, and setting OpenAPI authorization. Updated components, API calls, and forms to support dynamic pgroup selection and user-specific features.
2025-01-22 13:55:26 +01:00

704 lines
45 KiB
Plaintext
Raw Blame History

{
"cells": [
{
"cell_type": "code",
"id": "initial_id",
"metadata": {
"collapsed": true,
"ExecuteTime": {
"end_time": "2025-01-20T14:44:37.526742Z",
"start_time": "2025-01-20T14:44:37.522704Z"
}
},
"source": [
"import json\n",
"\n",
"#from nbclient.client import timestamp\n",
"\n",
"import backend.aareDBclient as aareDBclient\n",
"from aareDBclient.rest import ApiException\n",
"from pprint import pprint\n",
"\n",
"#from app.data.data import sample\n",
"\n",
"#from aareDBclient import SamplesApi, ShipmentsApi, PucksApi\n",
"#from aareDBclient.models import SampleEventCreate, SetTellPosition\n",
"#from examples.examples import api_response\n",
"\n",
"print(aareDBclient.__version__)\n",
"\n",
"configuration = aareDBclient.Configuration(\n",
" #host = \"https://mx-aare-test.psi.ch:1492\"\n",
" host = \"https://127.0.0.1:8000\"\n",
")\n",
"\n",
"print(configuration.host)\n",
"\n",
"configuration.verify_ssl = False # Disable SSL verification\n",
"#print(dir(SamplesApi))"
],
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"0.1.0a19\n",
"https://127.0.0.1:8000\n"
]
}
],
"execution_count": 2
},
{
"metadata": {
"ExecuteTime": {
"end_time": "2025-01-20T14:44:58.875370Z",
"start_time": "2025-01-20T14:44:58.805520Z"
}
},
"cell_type": "code",
"source": [
"## Fetch all Shipments, list corresponding dewars and pucks\n",
"\n",
"from datetime import date, datetime\n",
"from aareDBclient import ShipmentsApi\n",
"from aareDBclient.models import Shipment\n",
"\n",
"with aareDBclient.ApiClient(configuration) as api_client:\n",
" api_instance = aareDBclient.ShipmentsApi(api_client)\n",
"\n",
" try:\n",
" # Fetch all shipments\n",
" all_shipments_response = api_instance.fetch_shipments_shipments_get()\n",
"\n",
" # Print shipment names and their associated puck names\n",
" for shipment in all_shipments_response:\n",
" print(f\"Shipment ID: {shipment.id}, Shipment Name: {shipment.shipment_name}\")\n",
" if hasattr(shipment, 'dewars') and shipment.dewars: # Ensure 'dewars' exists\n",
" for dewar in shipment.dewars:\n",
" print(f\" Dewar ID: {dewar.id}, Dewar Name: {dewar.dewar_name}, Dewar Unique ID: {dewar.unique_id} \")\n",
"\n",
" if hasattr(dewar, 'pucks') and dewar.pucks: # Ensure 'pucks' exists\n",
" for puck in dewar.pucks:\n",
" print(f\" Puck ID: {puck.id}, Puck Name: {puck.puck_name}\")\n",
" else:\n",
" print(\" No pucks found in this dewar.\")\n",
" else:\n",
" print(\" No dewars found in this shipment.\")\n",
"\n",
" except ApiException as e:\n",
" print(f\"Exception when calling ShipmentsApi->fetch_shipments_shipments_get: {e}\")\n"
],
"id": "45cc7ab6d4589711",
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Shipment ID: 2, Shipment Name: Shipment from Mordor\n",
" Dewar ID: 1, Dewar Name: Dewar One, Dewar Unique ID: 83041c3f8844ff39 \n",
" Puck ID: 1, Puck Name: PUCK-001\n",
" Puck ID: 2, Puck Name: PUCK002\n",
" Puck ID: 3, Puck Name: PUCK003\n",
" Puck ID: 4, Puck Name: PUCK004\n",
" Puck ID: 5, Puck Name: PUCK005\n",
" Puck ID: 6, Puck Name: PUCK006\n",
" Puck ID: 7, Puck Name: PUCK007\n",
" Dewar ID: 2, Dewar Name: Dewar Two, Dewar Unique ID: 62baccecdd37c033 \n",
" Puck ID: 8, Puck Name: PK001\n",
" Puck ID: 9, Puck Name: PK002\n",
" Puck ID: 10, Puck Name: PK003\n",
" Puck ID: 11, Puck Name: PK004\n",
" Puck ID: 12, Puck Name: PK005\n",
" Puck ID: 13, Puck Name: PK006\n",
"Shipment ID: 3, Shipment Name: Shipment from Mordor\n",
" Dewar ID: 3, Dewar Name: Dewar Three, Dewar Unique ID: None \n",
" Puck ID: 14, Puck Name: P001\n",
" Puck ID: 15, Puck Name: P002\n",
" Puck ID: 16, Puck Name: P003\n",
" Puck ID: 17, Puck Name: P004\n",
" Puck ID: 18, Puck Name: P005\n",
" Puck ID: 19, Puck Name: P006\n",
" Puck ID: 20, Puck Name: P007\n",
" Dewar ID: 4, Dewar Name: Dewar Four, Dewar Unique ID: None \n",
" Puck ID: 21, Puck Name: PC002\n",
" Puck ID: 22, Puck Name: PC003\n",
" Puck ID: 23, Puck Name: PC004\n",
" Puck ID: 24, Puck Name: PC005\n",
" Puck ID: 25, Puck Name: PC006\n",
" Puck ID: 26, Puck Name: PC007\n",
"Shipment ID: 1, Shipment Name: Shipment from Mordor\n",
" Dewar ID: 5, Dewar Name: Dewar Five, Dewar Unique ID: 15e3dbe05e78ee83 \n",
" Puck ID: 27, Puck Name: PKK004\n",
" Puck ID: 28, Puck Name: PKK005\n",
" Puck ID: 29, Puck Name: PKK006\n",
" Puck ID: 30, Puck Name: PKK007\n",
"Shipment ID: 4, Shipment Name: testship\n",
" Dewar ID: 6, Dewar Name: Dewar_test, Dewar Unique ID: f352529444d64dd5 \n",
" Puck ID: 43, Puck Name: CPS-4093\n",
" Puck ID: 44, Puck Name: CPS-4178\n",
" Puck ID: 45, Puck Name: PSIMX-122\n",
" Puck ID: 46, Puck Name: CPS-6597\n",
" Puck ID: 47, Puck Name: PSIMX-078\n",
" Puck ID: 48, Puck Name: 1002\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/urllib3/connectionpool.py:1097: InsecureRequestWarning: Unverified HTTPS request is being made to host '127.0.0.1'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#tls-warnings\n",
" warnings.warn(\n"
]
}
],
"execution_count": 3
},
{
"metadata": {
"ExecuteTime": {
"end_time": "2025-01-17T14:14:30.201369Z",
"start_time": "2025-01-17T14:14:30.175577Z"
}
},
"cell_type": "code",
"source": [
"from datetime import date\n",
"from aareDBclient import LogisticsApi\n",
"from aareDBclient.models import LogisticsEventCreate # Import required model\n",
"\n",
"with aareDBclient.ApiClient(configuration) as api_client:\n",
" api_instance = aareDBclient.LogisticsApi(api_client)\n",
"\n",
" try:\n",
" # Create payload using the required model\n",
" logistics_event_create = LogisticsEventCreate(\n",
" dewar_qr_code='15e3dbe05e78ee83',\n",
" location_qr_code='A2-X06SA',\n",
" transaction_type='incoming',\n",
" timestamp=date.today() # Adjust if the API expects datetime\n",
" )\n",
"\n",
" # Pass the payload to the API function\n",
" api_response = api_instance.scan_dewar_logistics_dewar_scan_post(\n",
" logistics_event_create=logistics_event_create # Pass as an object\n",
" )\n",
" print(\"API Response:\", api_response)\n",
"\n",
" except ApiException as e:\n",
" print(f\"Exception when calling LogisticsApi->scan_dewar_logistics_dewar_scan_post: {e}\")\n",
"\n",
" try:\n",
" # Create payload using the required model\n",
" logistics_event_create = LogisticsEventCreate(\n",
" dewar_qr_code='15e3dbe05e78ee83',\n",
" location_qr_code='A2-X06SA',\n",
" transaction_type='refill',\n",
" timestamp=date.today() # Adjust if the API expects datetime\n",
" )\n",
"\n",
" # Pass the payload to the API function\n",
" api_response = api_instance.scan_dewar_logistics_dewar_scan_post(\n",
" logistics_event_create=logistics_event_create # Pass as an object\n",
" )\n",
" print(\"API Response:\", api_response)\n",
"\n",
" except ApiException as e:\n",
" print(f\"Exception when calling LogisticsApi->scan_dewar_logistics_dewar_scan_post: {e}\")\n",
"\n",
" try:\n",
" # Create payload using the required model\n",
" logistics_event_create = LogisticsEventCreate(\n",
" dewar_qr_code='15e3dbe05e78ee83',\n",
" location_qr_code='X06DA-Beamline',\n",
" transaction_type='beamline',\n",
" timestamp=date.today() # Adjust if the API expects datetime\n",
" )\n",
"\n",
" # Pass the payload to the API function\n",
" api_response = api_instance.scan_dewar_logistics_dewar_scan_post(\n",
" logistics_event_create=logistics_event_create # Pass as an object\n",
" )\n",
" print(\"API Response:\", api_response)\n",
"\n",
" except ApiException as e:\n",
" print(f\"Exception when calling LogisticsApi->scan_dewar_logistics_dewar_scan_post: {e}\")\n"
],
"id": "f5de1787214a6642",
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"API Response: {'message': 'Status updated successfully'}\n",
"API Response: {'message': 'Status updated successfully'}\n",
"API Response: {'message': 'Status updated successfully'}\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/urllib3/connectionpool.py:1097: InsecureRequestWarning: Unverified HTTPS request is being made to host '127.0.0.1'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#tls-warnings\n",
" warnings.warn(\n",
"/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/urllib3/connectionpool.py:1097: InsecureRequestWarning: Unverified HTTPS request is being made to host '127.0.0.1'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#tls-warnings\n",
" warnings.warn(\n",
"/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/urllib3/connectionpool.py:1097: InsecureRequestWarning: Unverified HTTPS request is being made to host '127.0.0.1'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#tls-warnings\n",
" warnings.warn(\n"
]
}
],
"execution_count": 45
},
{
"metadata": {
"ExecuteTime": {
"end_time": "2025-01-17T14:07:51.580993Z",
"start_time": "2025-01-17T14:07:51.565128Z"
}
},
"cell_type": "code",
"source": [
"# Get a list of pucks that are \"at the beamline\"\n",
"\n",
"with aareDBclient.ApiClient(configuration) as api_client:\n",
" # Create an instance of the API class\n",
" api_instance = aareDBclient.PucksApi(api_client)\n",
" get_pucks_at_beamline = aareDBclient.PucksApi(api_client)\n",
"\n",
" try:\n",
" # Create Return Address\n",
" api_response = api_instance.get_pucks_by_slot_pucks_slot_slot_identifier_get(slot_identifier='X06DA')\n",
" print(\"The response of PucksApi->get_pucks_by_slot_pucks_slot_slot_identifier_get:\\n\")\n",
" pprint(api_response)\n",
"\n",
" except ApiException as e:\n",
" print(\"Exception when calling PucksApi->get_pucks_by_slot_pucks_slot_slot_identifier_get: %s\\n\" % e)"
],
"id": "bbee7c94bf14000c",
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"The response of PucksApi->get_pucks_by_slot_pucks_slot_slot_identifier_get:\n",
"\n",
"[PuckWithTellPosition(id=43, puck_name='CPS-4093', puck_type='unipuck', puck_location_in_dewar=1, dewar_id=6, dewar_name='Dewar_test', user='e16371', samples=None, tell_position=None),\n",
" PuckWithTellPosition(id=44, puck_name='CPS-4178', puck_type='unipuck', puck_location_in_dewar=2, dewar_id=6, dewar_name='Dewar_test', user='e16371', samples=None, tell_position=None),\n",
" PuckWithTellPosition(id=45, puck_name='PSIMX-122', puck_type='unipuck', puck_location_in_dewar=3, dewar_id=6, dewar_name='Dewar_test', user='e16371', samples=None, tell_position=None),\n",
" PuckWithTellPosition(id=46, puck_name='CPS-6597', puck_type='unipuck', puck_location_in_dewar=4, dewar_id=6, dewar_name='Dewar_test', user='e16371', samples=None, tell_position=None),\n",
" PuckWithTellPosition(id=47, puck_name='PSIMX-078', puck_type='unipuck', puck_location_in_dewar=5, dewar_id=6, dewar_name='Dewar_test', user='e16371', samples=None, tell_position=None),\n",
" PuckWithTellPosition(id=48, puck_name='1002', puck_type='unipuck', puck_location_in_dewar=6, dewar_id=6, dewar_name='Dewar_test', user='e16371', samples=None, tell_position=None)]\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/urllib3/connectionpool.py:1097: InsecureRequestWarning: Unverified HTTPS request is being made to host '127.0.0.1'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#tls-warnings\n",
" warnings.warn(\n"
]
}
],
"execution_count": 42
},
{
"metadata": {
"ExecuteTime": {
"end_time": "2025-01-17T14:09:55.141237Z",
"start_time": "2025-01-17T14:09:55.117843Z"
}
},
"cell_type": "code",
"source": [
"# Attribute a puck to a position in the TELL dewar\n",
"\n",
"with aareDBclient.ApiClient(configuration) as api_client:\n",
" # Create an instance of the API class\n",
" api_instance = aareDBclient.PucksApi(api_client)\n",
" get_pucks_at_beamline = aareDBclient.PucksApi(api_client)\n",
"\n",
" # This part is commented but will be used to attribute a puck to a position of the TELL\n",
" # Define the puck ID and payload\n",
"\n",
" payload = [SetTellPosition(puck_name='CPS-4178', segment='A', puck_in_segment=2),SetTellPosition(puck_name='PSIMX122', segment='C', puck_in_segment=3)]\n",
" #payload = []\n",
"\n",
" try:\n",
" # Call the PUT method to update the tell_position\n",
" api_response = api_instance.set_tell_positions_pucks_set_tell_positions_put(payload)\n",
" print(\"The response of PucksApi->pucks_puck_id_tell_position_put:\\n\")\n",
" pprint(api_response)\n",
"\n",
" except ApiException as e:\n",
" print(\"Exception when calling PucksApi->pucks_puck_id_tell_position_put: %s\\n\" % e)"
],
"id": "d52d12287dd63299",
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"The response of PucksApi->pucks_puck_id_tell_position_put:\n",
"\n",
"[{'message': 'The tell_position was updated successfully.',\n",
" 'new_position': 'A2',\n",
" 'previous_position': None,\n",
" 'puck_name': 'CPS-4178',\n",
" 'status': 'updated'},\n",
" {'message': 'The tell_position was updated successfully.',\n",
" 'new_position': 'C3',\n",
" 'previous_position': None,\n",
" 'puck_name': 'PSIMX-122',\n",
" 'status': 'updated'}]\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/urllib3/connectionpool.py:1097: InsecureRequestWarning: Unverified HTTPS request is being made to host '127.0.0.1'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#tls-warnings\n",
" warnings.warn(\n"
]
}
],
"execution_count": 43
},
{
"metadata": {
"ExecuteTime": {
"end_time": "2025-01-20T10:00:34.361066Z",
"start_time": "2025-01-20T10:00:34.339557Z"
}
},
"cell_type": "code",
"source": [
"# Get puck_id puck_name sample_id sample_name of pucks in the tell\n",
"\n",
"with aareDBclient.ApiClient(configuration) as api_client:\n",
" # Create an instance of the API class\n",
" api_instance = aareDBclient.PucksApi(api_client)\n",
"\n",
" # GET request: Fetch all pucks in the tell\n",
" try:\n",
" # Call the API method to fetch pucks\n",
" all_pucks_response = api_instance.get_pucks_with_tell_position_pucks_with_tell_position_get()\n",
"\n",
" # Debug response structure by printing it in JSON format\n",
" formatted_response = json.dumps(\n",
" [p.to_dict() for p in all_pucks_response], # Assuming the API response can be converted to dicts\n",
" indent=4 # Use indentation for readability\n",
" )\n",
" #print(\"The response of PucksApi->get_all_pucks_in_tell (formatted):\\n\")\n",
" #print(formatted_response)\n",
"\n",
" # Iterate through each puck and print information\n",
" for p in all_pucks_response:\n",
" print(f\"Puck ID: {p.id}, Puck Name: {p.puck_name}\")\n",
"\n",
" # Check if the puck has any samples\n",
" if hasattr(p, 'samples') and p.samples: # Ensure 'samples' attribute exists and is not empty\n",
" for sample in p.samples:\n",
" print(f\" Sample ID: {sample.id}, Sample Name: {sample.sample_name}\")\n",
" else:\n",
" print(\" No samples found in this puck.\")\n",
"\n",
" except ApiException as e:\n",
" print(\"Exception when calling PucksApi->get_all_pucks_in_tell: %s\\n\" % e)"
],
"id": "95f8c133359945d5",
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Puck ID: 44, Puck Name: CPS-4178\n",
" Sample ID: 433, Sample Name: Dtpase_1\n",
" Sample ID: 434, Sample Name: Dtpase_2\n",
" Sample ID: 435, Sample Name: Dtpase_3\n",
" Sample ID: 436, Sample Name: Dtpase_4\n",
" Sample ID: 437, Sample Name: Dtpase_5\n",
" Sample ID: 438, Sample Name: Dtpase_6\n",
" Sample ID: 439, Sample Name: Dtpase_7\n",
" Sample ID: 440, Sample Name: Fckase_1\n",
" Sample ID: 441, Sample Name: Fckase_2\n",
" Sample ID: 442, Sample Name: Fckase_3\n",
" Sample ID: 443, Sample Name: Fckase_4\n",
" Sample ID: 444, Sample Name: Fckase_5\n",
" Sample ID: 445, Sample Name: Fckase_6\n",
" Sample ID: 446, Sample Name: Fckase_7\n",
" Sample ID: 447, Sample Name: Fckase_8\n",
" Sample ID: 448, Sample Name: Fckase_9\n",
"Puck ID: 45, Puck Name: PSIMX-122\n",
" Sample ID: 449, Sample Name: PopoI_1\n",
" Sample ID: 450, Sample Name: PopoI_2\n",
" Sample ID: 451, Sample Name: PopoI_3\n",
" Sample ID: 452, Sample Name: PopoI_4\n",
" Sample ID: 453, Sample Name: PopoI_5\n",
" Sample ID: 454, Sample Name: PopoI_6\n",
" Sample ID: 455, Sample Name: PopoI_7\n",
" Sample ID: 456, Sample Name: PopoI_8\n",
" Sample ID: 457, Sample Name: PopoI_9\n",
" Sample ID: 458, Sample Name: PopoI_10\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/urllib3/connectionpool.py:1097: InsecureRequestWarning: Unverified HTTPS request is being made to host '127.0.0.1'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#tls-warnings\n",
" warnings.warn(\n"
]
}
],
"execution_count": 53
},
{
"metadata": {
"ExecuteTime": {
"end_time": "2025-01-20T14:45:11.812597Z",
"start_time": "2025-01-20T14:45:11.793309Z"
}
},
"cell_type": "code",
"source": [
"from aareDBclient import SampleEventCreate\n",
"\n",
"# Create an event for a sample\n",
"\n",
"with aareDBclient.ApiClient(configuration) as api_client:\n",
" # Instance of the API client\n",
" api_instance = aareDBclient.SamplesApi(api_client)\n",
"\n",
" try:\n",
" # Define the payload with only `event_type`\n",
" sample_event_create = SampleEventCreate(\n",
" sample_id=433,\n",
" event_type=\"Mounted\" # Valid event type\n",
" )\n",
"\n",
" # Debug the payload before sending\n",
" print(\"Payload being sent to API:\")\n",
" print(sample_event_create.json()) # Ensure it matches `SampleEventCreate`\n",
"\n",
" # Call the API\n",
" api_response = api_instance.create_sample_event_samples_samples_sample_id_events_post(\n",
" sample_id=433, # Ensure this matches a valid sample ID in the database\n",
" sample_event_create=sample_event_create\n",
" )\n",
"\n",
" print(\"API response:\")\n",
" pprint(api_response)\n",
"\n",
" except ApiException as e:\n",
" print(\"Exception when calling post_sample_event:\")\n",
" print(f\"Status Code: {e.status}\")\n",
" if e.body:\n",
" print(f\"Error Details: {e.body}\")\n"
],
"id": "ee8abb293096334a",
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Payload being sent to API:\n",
"{\"event_type\":\"Mounted\"}\n",
"API response:\n",
"Sample(id=433, sample_name='Dtpase_1', position=1, puck_id=44, crystalname=None, proteinname=None, positioninpuck=None, priority=1, comments=None, data_collection_parameters=DataCollectionParameters(directory='{sgPuck}/{sgPosition}', oscillation=None, exposure=None, totalrange=None, transmission=None, targetresolution=None, aperture=None, datacollectiontype=None, processingpipeline='', spacegroupnumber=None, cellparameters=None, rescutkey=None, rescutvalue=None, userresolution=None, pdbid='', autoprocfull=False, procfull=False, adpenabled=False, noano=False, ffcscampaign=False, trustedhigh=None, autoprocextraparams=None, chiphiangles=None, dose=None), events=[SampleEventResponse(id=386, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 35, 38)), SampleEventResponse(id=387, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 40, 11)), SampleEventResponse(id=388, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 45, 4)), SampleEventResponse(id=389, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 45, 24)), SampleEventResponse(id=390, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 50, 38)), SampleEventResponse(id=391, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 11, 52, 28)), SampleEventResponse(id=392, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 12, 10, 20)), SampleEventResponse(id=393, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 13, 39, 24)), SampleEventResponse(id=394, sample_id=433, event_type='Mounted', timestamp=datetime.datetime(2025, 1, 20, 15, 45, 12))], mount_count=9, unmount_count=0)\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/urllib3/connectionpool.py:1097: InsecureRequestWarning: Unverified HTTPS request is being made to host '127.0.0.1'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#tls-warnings\n",
" warnings.warn(\n"
]
}
],
"execution_count": 4
},
{
"metadata": {
"ExecuteTime": {
"end_time": "2025-01-16T19:45:46.332149Z",
"start_time": "2025-01-16T19:45:46.320963Z"
}
},
"cell_type": "code",
"source": [
"\n",
"with aareDBclient.ApiClient(configuration) as api_client:\n",
" # Create an instance of the Samples API class\n",
" api_instance = aareDBclient.SamplesApi(api_client)\n",
"\n",
" try:\n",
" # Get the last sample event\n",
" last_event_response = api_instance.get_last_sample_event_samples_samples_sample_id_events_last_get(14)\n",
" print(\"The response of get_last_sample_event:\\n\")\n",
" pprint(last_event_response)\n",
"\n",
" except ApiException as e:\n",
" print(\"Exception when calling get_last_sample_event: %s\\n\" % e)\n"
],
"id": "6a808ee09f97ae13",
"outputs": [
{
"ename": "NameError",
"evalue": "name 'aareDBclient' is not defined",
"output_type": "error",
"traceback": [
"\u001B[0;31m---------------------------------------------------------------------------\u001B[0m",
"\u001B[0;31mNameError\u001B[0m Traceback (most recent call last)",
"Cell \u001B[0;32mIn[7], line 1\u001B[0m\n\u001B[0;32m----> 1\u001B[0m \u001B[38;5;28;01mwith\u001B[39;00m \u001B[43maareDBclient\u001B[49m\u001B[38;5;241m.\u001B[39mApiClient(configuration) \u001B[38;5;28;01mas\u001B[39;00m api_client:\n\u001B[1;32m 2\u001B[0m \u001B[38;5;66;03m# Create an instance of the Samples API class\u001B[39;00m\n\u001B[1;32m 3\u001B[0m api_instance \u001B[38;5;241m=\u001B[39m aareDBclient\u001B[38;5;241m.\u001B[39mSamplesApi(api_client)\n\u001B[1;32m 5\u001B[0m \u001B[38;5;28;01mtry\u001B[39;00m:\n\u001B[1;32m 6\u001B[0m \u001B[38;5;66;03m# Get the last sample event\u001B[39;00m\n",
"\u001B[0;31mNameError\u001B[0m: name 'aareDBclient' is not defined"
]
}
],
"execution_count": 7
},
{
"metadata": {
"ExecuteTime": {
"end_time": "2025-01-20T15:43:54.575154Z",
"start_time": "2025-01-20T15:43:54.539295Z"
}
},
"cell_type": "code",
"source": [
"from aareDBclient import ApiClient, SamplesApi # Import the appropriate client\n",
"from aareDBclient.rest import ApiException\n",
"import mimetypes\n",
"\n",
"# File path to the image\n",
"file_path = \"backend/tests/sample_image/IMG_1942.jpg\"\n",
"\n",
"# Sample ID\n",
"sample_id = 433 # Replace with a valid sample_id from your FastAPI backend\n",
"\n",
"# Initialize the API client\n",
"with ApiClient(configuration) as api_client:\n",
" api_instance = SamplesApi(api_client) # Adjust as per your API structure\n",
"\n",
" try:\n",
" # Open the file and read as binary\n",
" with open(file_path, \"rb\") as file:\n",
" # Get the MIME type for the file\n",
" mime_type, _ = mimetypes.guess_type(file_path)\n",
"\n",
" # Call the API method for uploading sample images\n",
" response = api_instance.upload_sample_images_samples_samples_sample_id_upload_images_post(\n",
" sample_id=sample_id,\n",
" uploaded_files=[file.read()] # Pass raw bytes as a list\n",
" )\n",
"\n",
" # Print the response from the API\n",
" print(\"API Response:\")\n",
" print(response)\n",
"\n",
" except ApiException as e:\n",
" # Handle API exception gracefully\n",
" print(\"Exception occurred while uploading the file:\")\n",
" print(f\"Status Code: {e.status}\")\n",
" if e.body:\n",
" print(f\"Error Details: {e.body}\")"
],
"id": "40404614d1a63f95",
"outputs": [
{
"ename": "ValueError",
"evalue": "Unsupported file value",
"output_type": "error",
"traceback": [
"\u001B[0;31m---------------------------------------------------------------------------\u001B[0m",
"\u001B[0;31mValueError\u001B[0m Traceback (most recent call last)",
"Cell \u001B[0;32mIn[77], line 22\u001B[0m\n\u001B[1;32m 19\u001B[0m mime_type, _ \u001B[38;5;241m=\u001B[39m mimetypes\u001B[38;5;241m.\u001B[39mguess_type(file_path)\n\u001B[1;32m 21\u001B[0m \u001B[38;5;66;03m# Call the API method for uploading sample images\u001B[39;00m\n\u001B[0;32m---> 22\u001B[0m response \u001B[38;5;241m=\u001B[39m \u001B[43mapi_instance\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mupload_sample_images_samples_samples_sample_id_upload_images_post\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 23\u001B[0m \u001B[43m \u001B[49m\u001B[43msample_id\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43msample_id\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 24\u001B[0m \u001B[43m \u001B[49m\u001B[43muploaded_files\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m[\u001B[49m\u001B[43mfile\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mread\u001B[49m\u001B[43m(\u001B[49m\u001B[43m)\u001B[49m\u001B[43m]\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;66;43;03m# Pass raw bytes as a list\u001B[39;49;00m\n\u001B[1;32m 25\u001B[0m \u001B[43m\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 27\u001B[0m \u001B[38;5;66;03m# Print the response from the API\u001B[39;00m\n\u001B[1;32m 28\u001B[0m \u001B[38;5;28mprint\u001B[39m(\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mAPI Response:\u001B[39m\u001B[38;5;124m\"\u001B[39m)\n",
"File \u001B[0;32m/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/pydantic/validate_call_decorator.py:60\u001B[0m, in \u001B[0;36mvalidate_call.<locals>.validate.<locals>.wrapper_function\u001B[0;34m(*args, **kwargs)\u001B[0m\n\u001B[1;32m 58\u001B[0m \u001B[38;5;129m@functools\u001B[39m\u001B[38;5;241m.\u001B[39mwraps(function)\n\u001B[1;32m 59\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m\u001B[38;5;250m \u001B[39m\u001B[38;5;21mwrapper_function\u001B[39m(\u001B[38;5;241m*\u001B[39margs, \u001B[38;5;241m*\u001B[39m\u001B[38;5;241m*\u001B[39mkwargs):\n\u001B[0;32m---> 60\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[43mvalidate_call_wrapper\u001B[49m\u001B[43m(\u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43margs\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[38;5;241;43m*\u001B[39;49m\u001B[43mkwargs\u001B[49m\u001B[43m)\u001B[49m\n",
"File \u001B[0;32m/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/pydantic/_internal/_validate_call.py:96\u001B[0m, in \u001B[0;36mValidateCallWrapper.__call__\u001B[0;34m(self, *args, **kwargs)\u001B[0m\n\u001B[1;32m 95\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m\u001B[38;5;250m \u001B[39m\u001B[38;5;21m__call__\u001B[39m(\u001B[38;5;28mself\u001B[39m, \u001B[38;5;241m*\u001B[39margs: Any, \u001B[38;5;241m*\u001B[39m\u001B[38;5;241m*\u001B[39mkwargs: Any) \u001B[38;5;241m-\u001B[39m\u001B[38;5;241m>\u001B[39m Any:\n\u001B[0;32m---> 96\u001B[0m res \u001B[38;5;241m=\u001B[39m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43m__pydantic_validator__\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mvalidate_python\u001B[49m\u001B[43m(\u001B[49m\u001B[43mpydantic_core\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mArgsKwargs\u001B[49m\u001B[43m(\u001B[49m\u001B[43margs\u001B[49m\u001B[43m,\u001B[49m\u001B[43m \u001B[49m\u001B[43mkwargs\u001B[49m\u001B[43m)\u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 97\u001B[0m \u001B[38;5;28;01mif\u001B[39;00m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39m__return_pydantic_validator__:\n\u001B[1;32m 98\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39m__return_pydantic_validator__(res)\n",
"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api/samples_api.py:875\u001B[0m, in \u001B[0;36mSamplesApi.upload_sample_images_samples_samples_sample_id_upload_images_post\u001B[0;34m(self, sample_id, uploaded_files, _request_timeout, _request_auth, _content_type, _headers, _host_index)\u001B[0m\n\u001B[1;32m 827\u001B[0m \u001B[38;5;129m@validate_call\u001B[39m\n\u001B[1;32m 828\u001B[0m \u001B[38;5;28;01mdef\u001B[39;00m\u001B[38;5;250m \u001B[39m\u001B[38;5;21mupload_sample_images_samples_samples_sample_id_upload_images_post\u001B[39m(\n\u001B[1;32m 829\u001B[0m \u001B[38;5;28mself\u001B[39m,\n\u001B[0;32m (...)\u001B[0m\n\u001B[1;32m 843\u001B[0m _host_index: Annotated[StrictInt, Field(ge\u001B[38;5;241m=\u001B[39m\u001B[38;5;241m0\u001B[39m, le\u001B[38;5;241m=\u001B[39m\u001B[38;5;241m0\u001B[39m)] \u001B[38;5;241m=\u001B[39m \u001B[38;5;241m0\u001B[39m,\n\u001B[1;32m 844\u001B[0m ) \u001B[38;5;241m-\u001B[39m\u001B[38;5;241m>\u001B[39m \u001B[38;5;28mobject\u001B[39m:\n\u001B[1;32m 845\u001B[0m \u001B[38;5;250m \u001B[39m\u001B[38;5;124;03m\"\"\"Upload Sample Images\u001B[39;00m\n\u001B[1;32m 846\u001B[0m \n\u001B[1;32m 847\u001B[0m \u001B[38;5;124;03m Uploads images for a sample and stores them in a directory structure: images/user/date/dewar_name/puck_name/position/. Args: sample_id (int): ID of the sample. uploaded_files (Union[List[UploadFile], List[bytes]]): List of image files (as UploadFile or raw bytes). db (Session): SQLAlchemy database session.\u001B[39;00m\n\u001B[0;32m (...)\u001B[0m\n\u001B[1;32m 872\u001B[0m \u001B[38;5;124;03m :return: Returns the result object.\u001B[39;00m\n\u001B[1;32m 873\u001B[0m \u001B[38;5;124;03m \"\"\"\u001B[39;00m \u001B[38;5;66;03m# noqa: E501\u001B[39;00m\n\u001B[0;32m--> 875\u001B[0m _param \u001B[38;5;241m=\u001B[39m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43m_upload_sample_images_samples_samples_sample_id_upload_images_post_serialize\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 876\u001B[0m \u001B[43m \u001B[49m\u001B[43msample_id\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43msample_id\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 877\u001B[0m \u001B[43m \u001B[49m\u001B[43muploaded_files\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43muploaded_files\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 878\u001B[0m \u001B[43m \u001B[49m\u001B[43m_request_auth\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_request_auth\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 879\u001B[0m \u001B[43m \u001B[49m\u001B[43m_content_type\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_content_type\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 880\u001B[0m \u001B[43m \u001B[49m\u001B[43m_headers\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_headers\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 881\u001B[0m \u001B[43m \u001B[49m\u001B[43m_host_index\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_host_index\u001B[49m\n\u001B[1;32m 882\u001B[0m \u001B[43m \u001B[49m\u001B[43m)\u001B[49m\n\u001B[1;32m 884\u001B[0m _response_types_map: Dict[\u001B[38;5;28mstr\u001B[39m, Optional[\u001B[38;5;28mstr\u001B[39m]] \u001B[38;5;241m=\u001B[39m {\n\u001B[1;32m 885\u001B[0m \u001B[38;5;124m'\u001B[39m\u001B[38;5;124m200\u001B[39m\u001B[38;5;124m'\u001B[39m: \u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mobject\u001B[39m\u001B[38;5;124m\"\u001B[39m,\n\u001B[1;32m 886\u001B[0m \u001B[38;5;124m'\u001B[39m\u001B[38;5;124m422\u001B[39m\u001B[38;5;124m'\u001B[39m: \u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mHTTPValidationError\u001B[39m\u001B[38;5;124m\"\u001B[39m,\n\u001B[1;32m 887\u001B[0m }\n\u001B[1;32m 888\u001B[0m response_data \u001B[38;5;241m=\u001B[39m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mapi_client\u001B[38;5;241m.\u001B[39mcall_api(\n\u001B[1;32m 889\u001B[0m \u001B[38;5;241m*\u001B[39m_param,\n\u001B[1;32m 890\u001B[0m _request_timeout\u001B[38;5;241m=\u001B[39m_request_timeout\n\u001B[1;32m 891\u001B[0m )\n",
"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api/samples_api.py:1099\u001B[0m, in \u001B[0;36mSamplesApi._upload_sample_images_samples_samples_sample_id_upload_images_post_serialize\u001B[0;34m(self, sample_id, uploaded_files, _request_auth, _content_type, _headers, _host_index)\u001B[0m\n\u001B[1;32m 1095\u001B[0m \u001B[38;5;66;03m# authentication setting\u001B[39;00m\n\u001B[1;32m 1096\u001B[0m _auth_settings: List[\u001B[38;5;28mstr\u001B[39m] \u001B[38;5;241m=\u001B[39m [\n\u001B[1;32m 1097\u001B[0m ]\n\u001B[0;32m-> 1099\u001B[0m \u001B[38;5;28;01mreturn\u001B[39;00m \u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mapi_client\u001B[49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mparam_serialize\u001B[49m\u001B[43m(\u001B[49m\n\u001B[1;32m 1100\u001B[0m \u001B[43m \u001B[49m\u001B[43mmethod\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[38;5;124;43m'\u001B[39;49m\u001B[38;5;124;43mPOST\u001B[39;49m\u001B[38;5;124;43m'\u001B[39;49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1101\u001B[0m \u001B[43m \u001B[49m\u001B[43mresource_path\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[38;5;124;43m'\u001B[39;49m\u001B[38;5;124;43m/samples/samples/\u001B[39;49m\u001B[38;5;132;43;01m{sample_id}\u001B[39;49;00m\u001B[38;5;124;43m/upload-images\u001B[39;49m\u001B[38;5;124;43m'\u001B[39;49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1102\u001B[0m \u001B[43m \u001B[49m\u001B[43mpath_params\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_path_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1103\u001B[0m \u001B[43m \u001B[49m\u001B[43mquery_params\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_query_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1104\u001B[0m \u001B[43m \u001B[49m\u001B[43mheader_params\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_header_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1105\u001B[0m \u001B[43m \u001B[49m\u001B[43mbody\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_body_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1106\u001B[0m \u001B[43m \u001B[49m\u001B[43mpost_params\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_form_params\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1107\u001B[0m \u001B[43m \u001B[49m\u001B[43mfiles\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_files\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1108\u001B[0m \u001B[43m \u001B[49m\u001B[43mauth_settings\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_auth_settings\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1109\u001B[0m \u001B[43m \u001B[49m\u001B[43mcollection_formats\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_collection_formats\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1110\u001B[0m \u001B[43m \u001B[49m\u001B[43m_host\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_host\u001B[49m\u001B[43m,\u001B[49m\n\u001B[1;32m 1111\u001B[0m \u001B[43m \u001B[49m\u001B[43m_request_auth\u001B[49m\u001B[38;5;241;43m=\u001B[39;49m\u001B[43m_request_auth\u001B[49m\n\u001B[1;32m 1112\u001B[0m \u001B[43m\u001B[49m\u001B[43m)\u001B[49m\n",
"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api_client.py:214\u001B[0m, in \u001B[0;36mApiClient.param_serialize\u001B[0;34m(self, method, resource_path, path_params, query_params, header_params, body, post_params, files, auth_settings, collection_formats, _host, _request_auth)\u001B[0m\n\u001B[1;32m 209\u001B[0m post_params \u001B[38;5;241m=\u001B[39m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mparameters_to_tuples(\n\u001B[1;32m 210\u001B[0m post_params,\n\u001B[1;32m 211\u001B[0m collection_formats\n\u001B[1;32m 212\u001B[0m )\n\u001B[1;32m 213\u001B[0m \u001B[38;5;28;01mif\u001B[39;00m files:\n\u001B[0;32m--> 214\u001B[0m post_params\u001B[38;5;241m.\u001B[39mextend(\u001B[38;5;28;43mself\u001B[39;49m\u001B[38;5;241;43m.\u001B[39;49m\u001B[43mfiles_parameters\u001B[49m\u001B[43m(\u001B[49m\u001B[43mfiles\u001B[49m\u001B[43m)\u001B[49m)\n\u001B[1;32m 216\u001B[0m \u001B[38;5;66;03m# auth setting\u001B[39;00m\n\u001B[1;32m 217\u001B[0m \u001B[38;5;28mself\u001B[39m\u001B[38;5;241m.\u001B[39mupdate_params_for_auth(\n\u001B[1;32m 218\u001B[0m header_params,\n\u001B[1;32m 219\u001B[0m query_params,\n\u001B[0;32m (...)\u001B[0m\n\u001B[1;32m 224\u001B[0m request_auth\u001B[38;5;241m=\u001B[39m_request_auth\n\u001B[1;32m 225\u001B[0m )\n",
"File \u001B[0;32m~/PycharmProjects/heidi-v2/backend/aareDBclient/api_client.py:554\u001B[0m, in \u001B[0;36mApiClient.files_parameters\u001B[0;34m(self, files)\u001B[0m\n\u001B[1;32m 552\u001B[0m filedata \u001B[38;5;241m=\u001B[39m v\n\u001B[1;32m 553\u001B[0m \u001B[38;5;28;01melse\u001B[39;00m:\n\u001B[0;32m--> 554\u001B[0m \u001B[38;5;28;01mraise\u001B[39;00m \u001B[38;5;167;01mValueError\u001B[39;00m(\u001B[38;5;124m\"\u001B[39m\u001B[38;5;124mUnsupported file value\u001B[39m\u001B[38;5;124m\"\u001B[39m)\n\u001B[1;32m 555\u001B[0m mimetype \u001B[38;5;241m=\u001B[39m (\n\u001B[1;32m 556\u001B[0m mimetypes\u001B[38;5;241m.\u001B[39mguess_type(filename)[\u001B[38;5;241m0\u001B[39m]\n\u001B[1;32m 557\u001B[0m \u001B[38;5;129;01mor\u001B[39;00m \u001B[38;5;124m'\u001B[39m\u001B[38;5;124mapplication/octet-stream\u001B[39m\u001B[38;5;124m'\u001B[39m\n\u001B[1;32m 558\u001B[0m )\n\u001B[1;32m 559\u001B[0m params\u001B[38;5;241m.\u001B[39mappend(\n\u001B[1;32m 560\u001B[0m \u001B[38;5;28mtuple\u001B[39m([k, \u001B[38;5;28mtuple\u001B[39m([filename, filedata, mimetype])])\n\u001B[1;32m 561\u001B[0m )\n",
"\u001B[0;31mValueError\u001B[0m: Unsupported file value"
]
}
],
"execution_count": 77
},
{
"metadata": {
"ExecuteTime": {
"end_time": "2025-01-20T15:14:51.219091Z",
"start_time": "2025-01-20T15:14:51.216755Z"
}
},
"cell_type": "code",
"source": "help(api_instance.upload_sample_images_samples_samples_sample_id_upload_images_post)",
"id": "8dd70634ffa5f37e",
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Help on method upload_sample_images_samples_samples_sample_id_upload_images_post in module aareDBclient.api.samples_api:\n",
"\n",
"upload_sample_images_samples_samples_sample_id_upload_images_post(sample_id: Annotated[int, Strict(strict=True)], uploaded_files: List[Union[Annotated[bytes, Strict(strict=True)], Annotated[str, Strict(strict=True)]]], _request_timeout: Union[NoneType, Annotated[float, Strict(strict=True), FieldInfo(annotation=NoneType, required=True, metadata=[Gt(gt=0)])], Tuple[Annotated[float, Strict(strict=True), FieldInfo(annotation=NoneType, required=True, metadata=[Gt(gt=0)])], Annotated[float, Strict(strict=True), FieldInfo(annotation=NoneType, required=True, metadata=[Gt(gt=0)])]]] = None, _request_auth: Optional[Dict[Annotated[str, Strict(strict=True)], Any]] = None, _content_type: Optional[Annotated[str, Strict(strict=True)]] = None, _headers: Optional[Dict[Annotated[str, Strict(strict=True)], Any]] = None, _host_index: Annotated[int, Strict(strict=True), FieldInfo(annotation=NoneType, required=True, metadata=[Ge(ge=0), Le(le=0)])] = 0) -> object method of aareDBclient.api.samples_api.SamplesApi instance\n",
" Upload Sample Images\n",
"\n",
" Uploads images for a sample and stores them in a directory structure: images/user/date/dewar_name/puck_name/position/. Args: sample_id (int): ID of the sample. uploaded_files (Union[List[UploadFile], List[bytes]]): List of image files (as UploadFile or raw bytes). db (Session): SQLAlchemy database session.\n",
"\n",
" :param sample_id: (required)\n",
" :type sample_id: int\n",
" :param uploaded_files: (required)\n",
" :type uploaded_files: List[bytearray]\n",
" :param _request_timeout: timeout setting for this request. If one\n",
" number provided, it will be total request\n",
" timeout. It can also be a pair (tuple) of\n",
" (connection, read) timeouts.\n",
" :type _request_timeout: int, tuple(int, int), optional\n",
" :param _request_auth: set to override the auth_settings for an a single\n",
" request; this effectively ignores the\n",
" authentication in the spec for a single request.\n",
" :type _request_auth: dict, optional\n",
" :param _content_type: force content-type for the request.\n",
" :type _content_type: str, Optional\n",
" :param _headers: set to override the headers for a single\n",
" request; this effectively ignores the headers\n",
" in the spec for a single request.\n",
" :type _headers: dict, optional\n",
" :param _host_index: set to override the host_index for a single\n",
" request; this effectively ignores the host_index\n",
" in the spec for a single request.\n",
" :type _host_index: int, optional\n",
" :return: Returns the result object.\n",
"\n"
]
}
],
"execution_count": 51
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 2
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython2",
"version": "2.7.6"
}
},
"nbformat": 4,
"nbformat_minor": 5
}
Reference in New Issue View Git Blame Copy Permalink