adding meta info classes
This commit is contained in:
@ -15,14 +15,17 @@ INCLUDE_DIRECTORIES(${GDCM_INCLUDE_DIRS})
|
||||
|
||||
SET(SRCS
|
||||
itkImageProcessor.cpp
|
||||
vtkContourTopogramProjectionFilter.cxx
|
||||
DRTMetaInformation.cpp
|
||||
|
||||
)
|
||||
|
||||
SET(HDR
|
||||
itkImageProcessor.h
|
||||
itkgSiddonJacobsRayCastInterpolateImageFunction.h
|
||||
itkgSiddonJacobsRayCastInterpolateImageFunction.hxx
|
||||
vtkContourTopogramProjectionFilter.cxx
|
||||
vtkContourTopogramProjectionFilter.h
|
||||
DRTMetaInformation.h
|
||||
)
|
||||
|
||||
ADD_LIBRARY(${LIB_NAME} ${SRCS} ${HDR})
|
||||
|
||||
220
reg23Topograms/itkDTRrecon/DRTMetaInformation.cpp
Normal file
220
reg23Topograms/itkDTRrecon/DRTMetaInformation.cpp
Normal file
@ -0,0 +1,220 @@
|
||||
#include "DRTMetaInformation.h"
|
||||
|
||||
|
||||
static double HFS2IEC[9] = {
|
||||
1, 0, 0,
|
||||
0, 0, 1,
|
||||
0, -1, 0};
|
||||
|
||||
static double FFS2IEC[9] = {
|
||||
-1, 0, 0,
|
||||
0, 0, -1,
|
||||
0, -1, 0};
|
||||
|
||||
namespace itk
|
||||
{
|
||||
|
||||
TopogramImageMetaInformation::
|
||||
TopogramImageMetaInformation(){
|
||||
|
||||
this->m_PatientOrientation =
|
||||
tPatOrientation::NotDefined;
|
||||
|
||||
this->m_ProjectionOrientation =
|
||||
tProjOrientationType::NA;
|
||||
|
||||
this->m_WLLevel = 0.;
|
||||
|
||||
this->m_WLWindow = 0.;
|
||||
|
||||
this->m_LPS2IECDirections.SetIdentity();
|
||||
|
||||
}
|
||||
|
||||
|
||||
void
|
||||
TopogramImageMetaInformation
|
||||
::PrintSelf(std::ostream& os, itk::Indent indent) const
|
||||
{
|
||||
Superclass::PrintSelf(os, indent);
|
||||
}
|
||||
|
||||
|
||||
TopogramImageMetaInformation
|
||||
::~TopogramImageMetaInformation ()
|
||||
{
|
||||
|
||||
}
|
||||
|
||||
|
||||
void TopogramImageMetaInformation ::
|
||||
SetPatientOrientation(tPatOrientation m_orient)
|
||||
{
|
||||
this->m_PatientOrientation = m_orient;
|
||||
|
||||
for(int iIdx = 0 ; iIdx < 3; iIdx++){
|
||||
for(int jIdx = 0 ; jIdx < 3; jIdx++){
|
||||
|
||||
switch (this->m_PatientOrientation) {
|
||||
case tPatOrientation::HFS:
|
||||
m_LPS2IECDirections.GetVnlMatrix()[iIdx][jIdx] = HFS2IEC[jIdx+iIdx*3];
|
||||
break;
|
||||
case tPatOrientation ::FFS:
|
||||
m_LPS2IECDirections.GetVnlMatrix()[iIdx][jIdx] = FFS2IEC[jIdx+iIdx*3];
|
||||
break;
|
||||
default:
|
||||
m_LPS2IECDirections.SetIdentity();
|
||||
break;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
|
||||
DRTImageMetaInformation::
|
||||
DRTImageMetaInformation(){
|
||||
|
||||
this->m_RequestedSize.Fill(0.);
|
||||
|
||||
this->m_Size.Fill(0.);
|
||||
|
||||
this->m_Spacing.Fill(0.);
|
||||
|
||||
this->m_Origin.Fill(0.);
|
||||
|
||||
}
|
||||
|
||||
void
|
||||
DRTImageMetaInformation
|
||||
::PrintSelf(std::ostream& os, itk::Indent indent) const
|
||||
{
|
||||
Superclass::PrintSelf(os, indent);
|
||||
}
|
||||
|
||||
|
||||
DRTImageMetaInformation
|
||||
::~DRTImageMetaInformation ()
|
||||
{
|
||||
|
||||
}
|
||||
|
||||
|
||||
CTVolumeImageMetaInformation::
|
||||
CTVolumeImageMetaInformation(){
|
||||
|
||||
this->m_PatientOrientation =
|
||||
tPatOrientation::NotDefined;
|
||||
|
||||
this->m_Spacing.Fill(0.);
|
||||
|
||||
this->m_Size.Fill(0.);
|
||||
|
||||
this->m_OriginLPS.Fill(0.);
|
||||
|
||||
this->m_ImageDirections.SetIdentity();
|
||||
|
||||
this->m_LPS2IECDirections.SetIdentity();
|
||||
|
||||
}
|
||||
|
||||
|
||||
void
|
||||
CTVolumeImageMetaInformation
|
||||
::PrintSelf(std::ostream& os, itk::Indent indent) const
|
||||
{
|
||||
Superclass::PrintSelf(os, indent);
|
||||
}
|
||||
|
||||
|
||||
CTVolumeImageMetaInformation
|
||||
::~CTVolumeImageMetaInformation ()
|
||||
{
|
||||
|
||||
}
|
||||
|
||||
void CTVolumeImageMetaInformation::
|
||||
SetPatientOrientation(tPatOrientation m_orient)
|
||||
{
|
||||
this->m_PatientOrientation = m_orient;
|
||||
|
||||
for(int iIdx = 0 ; iIdx < 3; iIdx++){
|
||||
for(int jIdx = 0 ; jIdx < 3; jIdx++){
|
||||
|
||||
switch (this->m_PatientOrientation) {
|
||||
case tPatOrientation::HFS:
|
||||
m_LPS2IECDirections.GetVnlMatrix()[iIdx][jIdx] = HFS2IEC[jIdx+iIdx*3];
|
||||
break;
|
||||
case tPatOrientation ::FFS:
|
||||
m_LPS2IECDirections.GetVnlMatrix()[iIdx][jIdx] = FFS2IEC[jIdx+iIdx*3];
|
||||
break;
|
||||
default:
|
||||
m_LPS2IECDirections.SetIdentity();
|
||||
break;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
}
|
||||
|
||||
CTVolumeImageMetaInformation::PointType
|
||||
CTVolumeImageMetaInformation::GetCOV()
|
||||
{
|
||||
|
||||
PointType Dest;
|
||||
|
||||
Dest[0]=(m_Size[0]-1) * m_Spacing [0];
|
||||
Dest[1]=(m_Size[1]-1) * m_Spacing [1];
|
||||
Dest[2]=(m_Size[2]-1) * m_Spacing [2];
|
||||
|
||||
PointType LastVoxelPosition =
|
||||
(m_ImageDirections * Dest);
|
||||
|
||||
LastVoxelPosition [0] += m_OriginLPS[0];
|
||||
LastVoxelPosition [1] += m_OriginLPS[1];
|
||||
LastVoxelPosition [2] += m_OriginLPS[2];
|
||||
|
||||
PointType image3DCOVLPS;
|
||||
image3DCOVLPS[0] = (m_OriginLPS[0] + LastVoxelPosition[0])/2.;
|
||||
image3DCOVLPS[1] = (m_OriginLPS[1] + LastVoxelPosition[1])/2.;
|
||||
image3DCOVLPS[2] = (m_OriginLPS[2] + LastVoxelPosition[2])/2.;
|
||||
|
||||
return
|
||||
image3DCOVLPS;
|
||||
}
|
||||
|
||||
|
||||
DRTProjectionGeometryImageMetaInformation::
|
||||
DRTProjectionGeometryImageMetaInformation(){
|
||||
|
||||
this->m_ProjectionAngle1IEC = 0.;
|
||||
|
||||
this->m_ProjectionAngle2IEC = 0.;
|
||||
|
||||
this->m_SCD = 0.;
|
||||
|
||||
this->m_ProjectionOriginLPS.Fill(0.);
|
||||
|
||||
this->m_ProjectionOriginLPSZero.Fill(0.);
|
||||
|
||||
this->m_ProjectionCenter.Fill(0.);
|
||||
|
||||
}
|
||||
|
||||
void
|
||||
DRTProjectionGeometryImageMetaInformation
|
||||
::PrintSelf(std::ostream& os, itk::Indent indent) const
|
||||
{
|
||||
Superclass::PrintSelf(os, indent);
|
||||
}
|
||||
|
||||
|
||||
DRTProjectionGeometryImageMetaInformation
|
||||
::~DRTProjectionGeometryImageMetaInformation ()
|
||||
{
|
||||
|
||||
}
|
||||
|
||||
|
||||
}
|
||||
292
reg23Topograms/itkDTRrecon/DRTMetaInformation.h
Normal file
292
reg23Topograms/itkDTRrecon/DRTMetaInformation.h
Normal file
@ -0,0 +1,292 @@
|
||||
#ifndef DRTMETAINFORMATION_H
|
||||
#define DRTMETAINFORMATION_H
|
||||
|
||||
#include "itkObject.h"
|
||||
#include "itkObjectFactory.h"
|
||||
#include "itkSmartPointer.h"
|
||||
#include "itkMacro.h"
|
||||
|
||||
#include "itkImage.h"
|
||||
|
||||
namespace itk
|
||||
{
|
||||
|
||||
typedef enum eProjectionOrientationType
|
||||
{NA = 0, LAT=2, PA=1}
|
||||
tProjOrientationType;
|
||||
|
||||
/** Enum type for Orientation */
|
||||
typedef enum eImageOrientationType
|
||||
{NotDefined = 0, HFS = 1, FFS = 2}
|
||||
tPatOrientation;
|
||||
|
||||
|
||||
class TopogramImageMetaInformation :
|
||||
public itk::Object{
|
||||
|
||||
public:
|
||||
/** standard typedefs **/
|
||||
typedef TopogramImageMetaInformation Self;
|
||||
typedef itk::Object Superclass;
|
||||
typedef itk::SmartPointer<Self> Pointer;
|
||||
typedef itk::Matrix<double, 3, 3> DirectionType;
|
||||
|
||||
/** Method for creation through the object factory. */
|
||||
itkNewMacro(Self);
|
||||
|
||||
/** Run-time type information (and related methods). */
|
||||
itkTypeMacro(TopogramImageMetaInformation, itk::Object);
|
||||
|
||||
/** object information streaming **/
|
||||
void PrintSelf(std::ostream& os, itk::Indent indent) const;
|
||||
|
||||
|
||||
void SetPatientOrientation(tPatOrientation);
|
||||
itkGetEnumMacro(PatientOrientation, tPatOrientation);
|
||||
|
||||
itkSetEnumMacro(ProjectionOrientation, tProjOrientationType);
|
||||
itkGetEnumMacro(ProjectionOrientation, tProjOrientationType);
|
||||
|
||||
itkSetMacro(WLLevel,double);
|
||||
itkGetMacro(WLLevel,double);
|
||||
|
||||
itkSetMacro(WLWindow,double);
|
||||
itkGetMacro(WLWindow,double);
|
||||
|
||||
itkSetMacro(LPS2IECDirections,DirectionType);
|
||||
itkGetMacro(LPS2IECDirections,DirectionType);
|
||||
|
||||
protected:
|
||||
|
||||
|
||||
tPatOrientation
|
||||
m_PatientOrientation;
|
||||
|
||||
tProjOrientationType
|
||||
m_ProjectionOrientation;
|
||||
|
||||
/** preferred level (windowing) **/
|
||||
double m_WLLevel;
|
||||
/** preferred window (windowing) **/
|
||||
double m_WLWindow;
|
||||
|
||||
DirectionType
|
||||
m_LPS2IECDirections;
|
||||
|
||||
|
||||
/** Default Constructor **/
|
||||
TopogramImageMetaInformation ();
|
||||
/** Default Destructor **/
|
||||
virtual ~TopogramImageMetaInformation ();
|
||||
|
||||
private:
|
||||
/** purposely not implemented **/
|
||||
TopogramImageMetaInformation (const Self&);
|
||||
|
||||
/** purposely not implemented **/
|
||||
void operator=(const Self&);
|
||||
};
|
||||
|
||||
|
||||
class DRTImageMetaInformation :
|
||||
public itk::Object{
|
||||
|
||||
public:
|
||||
/** standard typedefs **/
|
||||
typedef DRTImageMetaInformation Self;
|
||||
typedef itk::Object Superclass;
|
||||
typedef itk::SmartPointer<Self> Pointer;
|
||||
typedef itk::Point<double, 3> PointType;
|
||||
typedef itk::FixedArray<double, 3> SpacingType;
|
||||
typedef itk::FixedArray<unsigned int, 3> SizeType;
|
||||
|
||||
/** Method for creation through the object factory. */
|
||||
itkNewMacro(Self);
|
||||
|
||||
/** Run-time type information (and related methods). */
|
||||
itkTypeMacro(DRTImageMetaInformation, itk::Object);
|
||||
|
||||
/** object information streaming **/
|
||||
void PrintSelf(std::ostream& os, itk::Indent indent) const;
|
||||
|
||||
|
||||
itkSetMacro(RequestedSize,SizeType);
|
||||
itkGetMacro(RequestedSize,SizeType);
|
||||
|
||||
itkSetMacro(Size,SizeType);
|
||||
itkGetMacro(Size,SizeType);
|
||||
|
||||
itkSetMacro(Spacing,SpacingType);
|
||||
itkGetMacro(Spacing,SpacingType);
|
||||
|
||||
itkSetMacro(Origin,PointType);
|
||||
itkGetMacro(Origin,PointType);
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
SizeType
|
||||
m_RequestedSize,
|
||||
m_Size;
|
||||
|
||||
SpacingType
|
||||
m_Spacing;
|
||||
|
||||
PointType
|
||||
m_Origin;
|
||||
|
||||
/** Default Constructor **/
|
||||
DRTImageMetaInformation ();
|
||||
/** Default Destructor **/
|
||||
virtual ~DRTImageMetaInformation ();
|
||||
|
||||
private:
|
||||
/** purposely not implemented **/
|
||||
DRTImageMetaInformation(const Self&);
|
||||
|
||||
/** purposely not implemented **/
|
||||
void operator=(const Self&);
|
||||
};
|
||||
|
||||
|
||||
class CTVolumeImageMetaInformation :
|
||||
public itk::Object{
|
||||
|
||||
public:
|
||||
/** standard typedefs **/
|
||||
typedef CTVolumeImageMetaInformation Self;
|
||||
typedef itk::Object Superclass;
|
||||
typedef itk::SmartPointer<Self> Pointer;
|
||||
typedef itk::Matrix<double, 3, 3> DirectionType;
|
||||
typedef itk::Point<double, 3> PointType;
|
||||
typedef itk::FixedArray<double, 3> SpacingType;
|
||||
typedef itk::FixedArray<unsigned int, 3> SizeType;
|
||||
|
||||
/** Method for creation through the object factory. */
|
||||
itkNewMacro(Self);
|
||||
|
||||
/** Run-time type information (and related methods). */
|
||||
itkTypeMacro(CTVolumeImageMetaInformation , itk::Object);
|
||||
|
||||
/** object information streaming **/
|
||||
void PrintSelf(std::ostream& os, itk::Indent indent) const;
|
||||
|
||||
|
||||
void SetPatientOrientation(tPatOrientation);
|
||||
itkGetEnumMacro(PatientOrientation, tPatOrientation);
|
||||
|
||||
itkSetMacro(Spacing,SpacingType);
|
||||
itkGetMacro(Spacing,SpacingType);
|
||||
|
||||
itkSetMacro(Size,SizeType);
|
||||
itkGetMacro(Size,SizeType);
|
||||
|
||||
itkSetMacro(OriginLPS,PointType);
|
||||
itkGetMacro(OriginLPS,PointType);
|
||||
|
||||
itkSetMacro(LPS2IECDirections,DirectionType);
|
||||
itkGetMacro(LPS2IECDirections,DirectionType);
|
||||
|
||||
PointType GetCOV();
|
||||
|
||||
protected:
|
||||
|
||||
tPatOrientation
|
||||
m_PatientOrientation;
|
||||
|
||||
SpacingType
|
||||
m_Spacing;
|
||||
|
||||
SizeType
|
||||
m_Size;
|
||||
|
||||
PointType
|
||||
m_OriginLPS;
|
||||
|
||||
DirectionType
|
||||
m_ImageDirections,
|
||||
m_LPS2IECDirections;
|
||||
|
||||
/** Default Constructor **/
|
||||
CTVolumeImageMetaInformation ();
|
||||
/** Default Destructor **/
|
||||
virtual ~CTVolumeImageMetaInformation ();
|
||||
|
||||
private:
|
||||
/** purposely not implemented **/
|
||||
CTVolumeImageMetaInformation (const Self&);
|
||||
|
||||
/** purposely not implemented **/
|
||||
void operator=(const Self&);
|
||||
};
|
||||
|
||||
|
||||
class DRTProjectionGeometryImageMetaInformation :
|
||||
public itk::Object{
|
||||
|
||||
public:
|
||||
/** standard typedefs **/
|
||||
typedef DRTProjectionGeometryImageMetaInformation Self;
|
||||
typedef itk::Object Superclass;
|
||||
typedef itk::SmartPointer<Self> Pointer;
|
||||
typedef itk::Point<double, 3> PointType;
|
||||
|
||||
|
||||
/** Method for creation through the object factory. */
|
||||
itkNewMacro(Self);
|
||||
|
||||
/** Run-time type information (and related methods). */
|
||||
itkTypeMacro(DRTProjectionGeometryImageMetaInformation , itk::Object);
|
||||
|
||||
/** object information streaming **/
|
||||
void PrintSelf(std::ostream& os, itk::Indent indent) const;
|
||||
|
||||
itkSetMacro(ProjectionAngle1IEC, double);
|
||||
itkGetMacro(ProjectionAngle1IEC, double);
|
||||
|
||||
itkSetMacro(ProjectionAngle2IEC, double);
|
||||
itkGetMacro(ProjectionAngle2IEC, double);
|
||||
|
||||
itkSetMacro(SCD, double);
|
||||
itkGetMacro(SCD, double);
|
||||
|
||||
itkSetMacro(ProjectionOriginLPS,PointType);
|
||||
itkGetMacro(ProjectionOriginLPS,PointType);
|
||||
|
||||
itkSetMacro(ProjectionOriginLPSZero,PointType);
|
||||
itkGetMacro(ProjectionOriginLPSZero,PointType);
|
||||
|
||||
|
||||
itkSetMacro(ProjectionCenter, PointType);
|
||||
itkGetMacro(ProjectionCenter, PointType);
|
||||
|
||||
protected:
|
||||
|
||||
double
|
||||
m_ProjectionAngle1IEC,
|
||||
m_ProjectionAngle2IEC,
|
||||
m_SCD;
|
||||
|
||||
PointType
|
||||
m_ProjectionOriginLPS,
|
||||
m_ProjectionOriginLPSZero,
|
||||
m_ProjectionCenter;
|
||||
|
||||
|
||||
/** Default Constructor **/
|
||||
DRTProjectionGeometryImageMetaInformation ();
|
||||
/** Default Destructor **/
|
||||
virtual ~DRTProjectionGeometryImageMetaInformation ();
|
||||
|
||||
private:
|
||||
/** purposely not implemented **/
|
||||
DRTProjectionGeometryImageMetaInformation (const Self&);
|
||||
|
||||
/** purposely not implemented **/
|
||||
void operator=(const Self&);
|
||||
};
|
||||
|
||||
|
||||
}
|
||||
|
||||
#endif
|
||||
@ -154,6 +154,10 @@ itkImageProcessor::itkImageProcessor()
|
||||
m_Projection1VTKTransform->Identity();
|
||||
m_Projection2VTKTransform = vtkMatrix4x4::New();
|
||||
m_Projection2VTKTransform->Identity();
|
||||
|
||||
|
||||
m_CTMetaInfo = NULL;
|
||||
|
||||
}
|
||||
|
||||
itkImageProcessor::~itkImageProcessor()
|
||||
@ -416,6 +420,8 @@ int itkImageProcessor::load3DSerie(const char * pcDirName)
|
||||
return EXIT_FAILURE;
|
||||
}
|
||||
|
||||
m_CTMetaInfo = CTVolumeImageMetaInformation::New();
|
||||
|
||||
|
||||
|
||||
|
||||
@ -808,7 +814,6 @@ int itkImageProcessor::load2D(const char * pcFName){
|
||||
caster2DInput->GetOutput();
|
||||
|
||||
double* m_ImageIntensity;
|
||||
FlipFilterType::Pointer m_FlipFilter;
|
||||
DuplicatorType::Pointer m_Duplicator;
|
||||
bool* m_ImLoaded;
|
||||
|
||||
@ -906,7 +911,6 @@ void itkImageProcessor::InitializeProjector()
|
||||
|
||||
}
|
||||
|
||||
#include <math.h>
|
||||
|
||||
|
||||
itkImageProcessor::InternalImageType::DirectionType
|
||||
|
||||
@ -13,24 +13,22 @@ gfattori 08.11.2021
|
||||
#define ITKIMAGEPROCESSOR_H
|
||||
|
||||
|
||||
#include "DRTMetaInformation.h"
|
||||
|
||||
#include "itkCommand.h"
|
||||
|
||||
#include "itkPowellOptimizer.h"
|
||||
#include "itkgSiddonJacobsRayCastInterpolateImageFunction.h"
|
||||
#include "itkEuler3DTransform.h"
|
||||
#include "itkTwoProjectionImageRegistrationMethod.h"
|
||||
#include "itkResampleImageFilter.h"
|
||||
#include "itkCastImageFilter.h"
|
||||
#include "itkRescaleIntensityImageFilter.h"
|
||||
#include "itkFlipImageFilter.h"
|
||||
#include "itkChangeInformationImageFilter.h"
|
||||
#include "itkTimeProbesCollectorBase.h"
|
||||
#include "itkNormalizedCorrelationTwoImageToOneImageMetric.h"
|
||||
#include "itkGDCMImageIO.h"
|
||||
#include "itkMetaDataObject.h"
|
||||
#include "itkImageDuplicator.h"
|
||||
|
||||
#include "gdcmGlobal.h"
|
||||
#include "itkObject.h"
|
||||
#include "itkObjectFactory.h"
|
||||
#include "itkSmartPointer.h"
|
||||
|
||||
#include "itkImageToVTKImageFilter.h"
|
||||
|
||||
@ -38,16 +36,16 @@ gfattori 08.11.2021
|
||||
#include "itkImageFileWriter.h"
|
||||
#include "itkImageSeriesReader.h"
|
||||
|
||||
#include "gdcmGlobal.h"
|
||||
|
||||
|
||||
#include "vtkImageData.h"
|
||||
#include "vtkTransform.h"
|
||||
#include "vtkSmartPointer.h"
|
||||
|
||||
|
||||
namespace itk
|
||||
{
|
||||
|
||||
|
||||
|
||||
/* reference string required for comparison with tag values */
|
||||
static const char *ImageOrientationStrings[] = {
|
||||
"NotDefined",
|
||||
@ -55,7 +53,7 @@ static const char *ImageOrientationStrings[] = {
|
||||
"FFS"
|
||||
};
|
||||
|
||||
class ITK_EXPORT itkImageProcessor : public Object
|
||||
class ITK_EXPORT itkImageProcessor : public itk::Object
|
||||
{
|
||||
|
||||
constexpr static unsigned int Dimension = 3;
|
||||
@ -66,8 +64,8 @@ public:
|
||||
/** Standard "Superclass" typedef. */
|
||||
typedef Object Superclass;
|
||||
/** Smart pointer typedef support */
|
||||
typedef SmartPointer<Self> Pointer;
|
||||
typedef SmartPointer<const Self> ConstPointer;
|
||||
typedef itk::SmartPointer<Self> Pointer;
|
||||
typedef itk::SmartPointer<const Self> ConstPointer;
|
||||
/** Method of creation through the object factory. */
|
||||
itkNewMacro(Self);
|
||||
/** Run-time type information (and related methods). */
|
||||
@ -115,7 +113,7 @@ public:
|
||||
const double* GetLPStoProjectionGeoLPSOffset();
|
||||
|
||||
/** Get Projection origin in LPS coordinates*/
|
||||
const double* GetRTImportOffset();
|
||||
const double* GetRTImportOffset();
|
||||
|
||||
|
||||
/** Apply transform to CT volume.
|
||||
@ -140,8 +138,6 @@ public:
|
||||
vtkMatrix4x4 * GetProjection1VTKTransform();
|
||||
vtkMatrix4x4 * GetProjection2VTKTransform();
|
||||
|
||||
vtkTransform * GetProjection1vtkTransform();
|
||||
|
||||
/** Debug writers */
|
||||
void WriteProjectionImages();
|
||||
void Write2DImages();
|
||||
@ -154,18 +150,12 @@ public:
|
||||
|
||||
using ImageType3D = itk::Image<PixelType3D, Dimension>;
|
||||
using InternalImageType = itk::Image<InternalPixelType, Dimension>;
|
||||
typedef enum eProjectionOrientationType
|
||||
{NA = 0, LAT=2, PA=1}
|
||||
tProjOrientationType;
|
||||
/** Enum type for Orientation */
|
||||
typedef enum eImageOrientationType
|
||||
{ NotDefined = 0, HFS = 1, FFS = 2}
|
||||
tPatOrientation;
|
||||
|
||||
|
||||
protected:
|
||||
itkImageProcessor();
|
||||
virtual ~itkImageProcessor();
|
||||
void PrintSelf(std::ostream& os, Indent indent) const;
|
||||
void PrintSelf(std::ostream& os, itk::Indent indent) const;
|
||||
|
||||
|
||||
|
||||
@ -185,11 +175,7 @@ private:
|
||||
registration: The transform, optimizer, metric, interpolator and
|
||||
the registration method itself. */
|
||||
using TransformType = itk::Euler3DTransform<double>;
|
||||
using OptimizerType = itk::PowellOptimizer;
|
||||
using MetricType = itk::NormalizedCorrelationTwoImageToOneImageMetric<InternalImageType, InternalImageType>;
|
||||
using InterpolatorType = itk::gSiddonJacobsRayCastInterpolateImageFunction<InternalImageType, double>;
|
||||
using RegistrationType = itk::TwoProjectionImageRegistrationMethod<InternalImageType, InternalImageType>;
|
||||
using ParametersType = RegistrationType::ParametersType;
|
||||
|
||||
/** Image reader types */
|
||||
using ImageReaderType2D = itk::ImageFileReader<ImageType2D>;
|
||||
@ -199,7 +185,6 @@ private:
|
||||
using DuplicatorType = itk::ImageDuplicator<InternalImageType>;
|
||||
|
||||
/** widely used filters: flip, cast, rescale, ... */
|
||||
using FlipFilterType = itk::FlipImageFilter<InternalImageType>;
|
||||
using Input2DRescaleFilterType = itk::RescaleIntensityImageFilter<InternalImageType, InternalImageType>;
|
||||
using CastFilterType3D = itk::CastImageFilter<ImageType3D, InternalImageType>;
|
||||
using ChangeInformationFilterType = itk::ChangeInformationImageFilter<InternalImageType>;
|
||||
@ -337,6 +322,9 @@ ImageType3D::PointType ImportOffset;
|
||||
* m_Projection2VTKTransform;
|
||||
|
||||
|
||||
CTVolumeImageMetaInformation::Pointer
|
||||
m_CTMetaInfo;
|
||||
|
||||
|
||||
};
|
||||
|
||||
|
||||
Reference in New Issue
Block a user