M3settings (#228)

* added temp m3 settings files

* renames settings noise to trim

* get threshold for M3

* some changes to compile on RH7 and in the server to load the default chip status register at startup

* Updated mythen3DeectorServer_developer executable with correct initialization at startup

Co-authored-by: Erik Frojdh <erik.frojdh@gmail.com>
Co-authored-by: Anna Bergamaschi <anna.bergamaschi@psi.ch>

RELEASE.txt

@@ -1,13 +1,14 @@
-SLS Detector Package 5.0.1 released on 25.11.2020 (Bug Fix Release)
+SLS Detector Package 5.1.0 released on xx.xx.2020 (Minor Release)
 ===================================================================
 
-This document describes the differences between 5.0.1 and 5.0.0 releases.   
+This document describes the differences between 5.1.0 and 5.x.x releases.   
 
 
 
     CONTENTS
     --------
     1.  Topics Concerning
+    2.  New Features
     2.  Resolved Issues
     3.  Known Issues
     4.  Firmware Requirements
@@ -18,53 +19,57 @@ This document describes the differences between 5.0.1 and 5.0.0 releases.
 1. Topics Concerning
 ====================
 
-    - Python bindings
-    - CMake improvements
+    - potentital memory leak in receiver
+    - scanParameters in Python
+    - cmk.sh refactored
+    - m3 settings and threshold
 
 
+2. New Features
+===============
 
-2. Resolved Issues
+    Client
+    ------
+
+    1. Aded settings and threshold features for Mythen3.
+    
+
+3. Resolved Issues
 ==================
 
-    Python bindings
-    ---------------
 
-    1.  Fixed function signatures for getRxUDPSocketBufferSize, 
-        setRxUDPSocketBufferSize and getRxRealUDPSocketBufferSize. 
+    Receiver
+    --------
 
-    2.  Updated pybind11 to v2.6.1 to remove warnings with Python 3.9 and 
-        better handling of C++ standard. 
+    1.  Current code only calls Implementation::setDetectorType from constructor, 
+	    but potential memory leak if called out of constructor context. Fixed.
 
-    3.  Added missing properties in Python. 
+    Client
+    ------
 
+    1.  Fixed missing scanParameters class in Python 
 
-    CMake improvements
-    ------------------
-
-    1. Explicitly state Python 3.6 or greater.
-
-    2. Finds the Python of the activated environment when using conda 
-       without having to supply additional arguments.  
-
-    3. Removed redundant libraries for linking targets. 
+    2.  cmk.sh refactored to have better option handling
 
 
 
-3. Firmware Requirements
+
+
+4. Firmware Requirements
 ========================
         
     No updates from 5.0.0
 
 
 
-4. Known Issues
+5. Known Issues
 ===============
 
     No updates from 5.0.0
 
 
 
-5. Download, Documentation & Support
+6. Download, Documentation & Support
 ====================================
 
     Download

python/CMakeLists.txt

@@ -4,6 +4,8 @@ pybind11_add_module(_slsdet
     src/enums.cpp
     src/detector.cpp
     src/network.cpp
+    src/pattern.cpp
+    src/scan.cpp
 )
 
 target_link_libraries(_slsdet PUBLIC 
@@ -28,6 +30,7 @@ set( PYTHON_FILES
     enums.py
     errors.py
     gotthard.py
+    pattern.py
     gotthard2.py
     moench.py
     proxy.py

python/examples/manipulate_pattern.py

@@ -0,0 +1,14 @@
+
+
+from slsdet import Detector, patternParameters
+
+d = Detector()
+pat = patternParameters()
+
+#Access to members of the structure using numpy arrays
+pat.patlimits = 0x0, 0xa
+
+d.setPattern(pat)
+
+#Load pattern from file
+pat.load("/some/dir/some.pat")

python/examples/use_enum.py

@@ -6,7 +6,7 @@ d = Detector()
 d.fformat = fileFormat.BINARY
 
 # Altough not recommended for convenience all enums 
-# and some other things can be impored using *
+# and some other things can be imported using *
 
 from slsdet import *
 d.speed = speedLevel.FULL_SPEED 
@@ -15,6 +15,6 @@ d.speed = speedLevel.FULL_SPEED
 
 import slsdet.enums
 for enum in dir(slsdet.enums):
-    # filter out special memebers
+    # filter out special members
     if not enum.startswith('_'):
         print(enum)

python/examples/using_scan.py

@@ -0,0 +1,19 @@
+
+from slsdet import Mythen3, scanParameters, dacIndex
+
+#Configure scan
+sp = scanParameters()
+sp.enable = 1 
+sp.dacInd = dacIndex.VTH1
+sp.startOffset = 0
+sp.stopOffset = 1000
+sp.stepSize = 100
+sp.dacSettleTime_ns = int(1e9)
+
+
+# Send scan to detector
+d = Mythen3()
+d.setScan(sp)
+
+
+

python/scripts/basic.py

@@ -10,6 +10,8 @@ from slsdet.lookup import view, find
 import slsdet
 
 
+
+
 d = Detector()
 e = Eiger()
 c = Ctb()

python/scripts/generate_enums.py

@@ -55,7 +55,7 @@ def generate_enum_string(enums):
         data.append('.export_values();\n\n')
     return ''.join(data)
 
-with open('../../slsSupportLib/include/sls_detector_defs.h') as f:
+with open('../../slsSupportLib/include/sls/sls_detector_defs.h') as f:
     data = f.read()
 
 data = remove_comments(data)

python/slsdet/__init__.py

@@ -8,6 +8,8 @@ from .mythen3 import Mythen3
 from .gotthard2 import Gotthard2
 from .gotthard import Gotthard
 from .moench import Moench
+from .pattern import Pattern, patternParameters
+
 
 import _slsdet
 xy = _slsdet.xy
@@ -18,3 +20,4 @@ from .enums import *
 
 IpAddr = _slsdet.IpAddr
 MacAddr = _slsdet.MacAddr
+scanParameters = _slsdet.scanParameters

python/slsdet/detector.py

@@ -1696,6 +1696,8 @@ class Detector(CppDetectorApi):
         To change settings as well or set threshold without trimbits, use setThresholdEnergy.
         :setter: It loads trim files from settingspath.
         """
+        if self.type == detectorType.MYTHEN3:
+            return self.getAllThresholdEnergy()
         return self.getThresholdEnergy()
 
     @threshold.setter

python/slsdet/pattern.py

@@ -0,0 +1,53 @@
+import _slsdet
+
+from _slsdet import Pattern
+
+
+class patternParameters(_slsdet.patternParameters):
+    def __init__(self):
+        super().__init__()
+        self.view = self.numpy_view()
+        self.names = self.view.dtype.names
+
+    def __getattr__(self, name):
+        if name in self.names:
+            return self.view[name][0]
+        else:
+            raise KeyError(f"Key: {name} not found")
+
+    def __setattr__(self, name, value):
+        if name in ["view", "names"]:
+            self.__dict__[name] = value
+        elif name in self.names:
+            self.view[name] = value
+        else:
+            raise KeyError(f"Key: {name} not found")
+
+    # Provide custom dir for tab completion
+    def __dir__(self):
+        return self.names
+
+
+class Pattern(_slsdet.Pattern):
+    def __init__(self):
+        super().__init__()
+        self.view = self.data().numpy_view()
+        self.names = self.view.dtype.names
+
+    def __getattr__(self, name):
+        if name in self.names:
+            return self.view[name][0]
+        else:
+            raise KeyError(f"Key: {name} not found")
+
+    def __setattr__(self, name, value):
+        if name in ["view", "names"]:
+            self.__dict__[name] = value
+        elif name in self.names:
+            self.view[name] = value
+        else:
+            raise KeyError(f"Key: {name} not found")
+
+    # Provide custom dir for tab completion
+    def __dir__(self):
+        return self.names

python/src/detector.cpp

@@ -102,6 +102,34 @@ void init_det(py::module &m) {
              (void (Detector::*)(defs::detectorSettings, sls::Positions)) &
                  Detector::setSettings,
              py::arg(), py::arg() = Positions{})
+        .def("getThresholdEnergy",
+             (Result<int>(Detector::*)(sls::Positions) const) &
+                 Detector::getThresholdEnergy,
+             py::arg() = Positions{})
+        .def("getAllThresholdEnergy",
+             (Result<std::array<int, 3>>(Detector::*)(sls::Positions) const) &
+                 Detector::getAllThresholdEnergy,
+             py::arg() = Positions{})
+        .def("setThresholdEnergy",
+             (void (Detector::*)(int, defs::detectorSettings, bool,
+                                 sls::Positions)) &
+                 Detector::setThresholdEnergy,
+             py::arg(), py::arg() = defs::STANDARD, py::arg() = true,
+             py::arg() = Positions{})
+        .def("setThresholdEnergy",
+             (void (Detector::*)(std::array<int, 3>, defs::detectorSettings,
+                                 bool, sls::Positions)) &
+                 Detector::setThresholdEnergy,
+             py::arg(), py::arg() = defs::STANDARD, py::arg() = true,
+             py::arg() = Positions{})
+        .def("getSettingsPath",
+             (Result<std::string>(Detector::*)(sls::Positions) const) &
+                 Detector::getSettingsPath,
+             py::arg() = Positions{})
+        .def("setSettingsPath",
+             (void (Detector::*)(const std::string &, sls::Positions)) &
+                 Detector::setSettingsPath,
+             py::arg(), py::arg() = Positions{})
         .def("loadTrimbits",
              (void (Detector::*)(const std::string &, sls::Positions)) &
                  Detector::loadTrimbits,
@@ -114,6 +142,14 @@ void init_det(py::module &m) {
              (void (Detector::*)(int, sls::Positions)) &
                  Detector::setAllTrimbits,
              py::arg(), py::arg() = Positions{})
+        .def("getTrimEnergies",
+             (Result<std::vector<int>>(Detector::*)(sls::Positions) const) &
+                 Detector::getTrimEnergies,
+             py::arg() = Positions{})
+        .def("setTrimEnergies",
+             (void (Detector::*)(std::vector<int>, sls::Positions)) &
+                 Detector::setTrimEnergies,
+             py::arg(), py::arg() = Positions{})
         .def("getGapPixelsinCallback",
              (bool (Detector::*)() const) & Detector::getGapPixelsinCallback)
         .def("setGapPixelsinCallback",
@@ -783,24 +819,6 @@ void init_det(py::module &m) {
              (void (Detector::*)(sls::ns, sls::Positions)) &
                  Detector::setSubDeadTime,
              py::arg(), py::arg() = Positions{})
-        .def("getThresholdEnergy",
-             (Result<int>(Detector::*)(sls::Positions) const) &
-                 Detector::getThresholdEnergy,
-             py::arg() = Positions{})
-        .def("setThresholdEnergy",
-             (void (Detector::*)(int, defs::detectorSettings, bool,
-                                 sls::Positions)) &
-                 Detector::setThresholdEnergy,
-             py::arg(), py::arg() = defs::STANDARD, py::arg() = true,
-             py::arg() = Positions{})
-        .def("getSettingsPath",
-             (Result<std::string>(Detector::*)(sls::Positions) const) &
-                 Detector::getSettingsPath,
-             py::arg() = Positions{})
-        .def("setSettingsPath",
-             (void (Detector::*)(const std::string &, sls::Positions)) &
-                 Detector::setSettingsPath,
-             py::arg(), py::arg() = Positions{})
         .def("getOverFlowMode",
              (Result<bool>(Detector::*)(sls::Positions) const) &
                  Detector::getOverFlowMode,
@@ -816,14 +834,6 @@ void init_det(py::module &m) {
         .def("setBottom",
              (void (Detector::*)(bool, sls::Positions)) & Detector::setBottom,
              py::arg(), py::arg() = Positions{})
-        .def("getTrimEnergies",
-             (Result<std::vector<int>>(Detector::*)(sls::Positions) const) &
-                 Detector::getTrimEnergies,
-             py::arg() = Positions{})
-        .def("setTrimEnergies",
-             (void (Detector::*)(std::vector<int>, sls::Positions)) &
-                 Detector::setTrimEnergies,
-             py::arg(), py::arg() = Positions{})
         .def("getRateCorrection",
              (Result<sls::ns>(Detector::*)(sls::Positions) const) &
                  Detector::getRateCorrection,
@@ -1271,9 +1281,17 @@ void init_det(py::module &m) {
              (void (Detector::*)(const std::string &, sls::Positions)) &
                  Detector::setPattern,
              py::arg(), py::arg() = Positions{})
+        .def("setPattern",
+             (void (Detector::*)(const sls::Pattern &, sls::Positions)) &
+                 Detector::setPattern,
+             py::arg(), py::arg() = Positions{})
         .def("savePattern",
              (void (Detector::*)(const std::string &)) & Detector::savePattern,
              py::arg())
+        .def("loadDefaultPattern",
+             (void (Detector::*)(sls::Positions)) &
+                 Detector::loadDefaultPattern,
+             py::arg() = Positions{})
         .def("getPatternIOControl",
              (Result<uint64_t>(Detector::*)(sls::Positions) const) &
                  Detector::getPatternIOControl,

python/src/enums.cpp

@@ -2,10 +2,12 @@
  * warning */
 
 #include <pybind11/chrono.h>
+#include <pybind11/numpy.h>
 #include <pybind11/operators.h>
 #include <pybind11/pybind11.h>
 #include <pybind11/stl.h>
 
+#include "sls/Pattern.h"
 #include "sls/sls_detector_defs.h"
 namespace py = pybind11;
 void init_enums(py::module &m) {

python/src/enums_in.cpp

@@ -1,18 +1,19 @@
 #include <pybind11/chrono.h>
+#include <pybind11/numpy.h>
 #include <pybind11/operators.h>
 #include <pybind11/pybind11.h>
 #include <pybind11/stl.h>
 
 #include "sls/sls_detector_defs.h"
+#include "sls/Pattern.h"
 namespace py = pybind11;
 void init_enums(py::module &m) {
     py::class_<slsDetectorDefs> Defs(m, "slsDetectorDefs");
     py::class_<slsDetectorDefs::xy> xy(m, "xy");
     xy.def(py::init());
-	xy.def(py::init<int,int>());
+    xy.def(py::init<int, int>());
     xy.def_readwrite("x", &slsDetectorDefs::xy::x);
     xy.def_readwrite("y", &slsDetectorDefs::xy::y);
 
-[[ENUMS]]
-
+    [[ENUMS]]
 }

python/src/main.cpp

@@ -19,6 +19,8 @@ void init_enums(py::module &);
 void init_experimental(py::module &);
 void init_det(py::module &);
 void init_network(py::module &);
+void init_pattern(py::module &);
+void init_scan(py::module &);
 PYBIND11_MODULE(_slsdet, m) {
     m.doc() = R"pbdoc(
         C/C++ API
@@ -33,6 +35,8 @@ PYBIND11_MODULE(_slsdet, m) {
      init_enums(m);
      init_det(m);
      init_network(m);
+     init_pattern(m);
+     init_scan(m);
     //  init_experimental(m);
     
 

python/src/pattern.cpp

@@ -0,0 +1,29 @@
+#include <pybind11/chrono.h>
+#include <pybind11/numpy.h>
+#include <pybind11/operators.h>
+#include <pybind11/pybind11.h>
+#include <pybind11/stl.h>
+
+#include "sls/Pattern.h"
+#include "sls/sls_detector_defs.h"
+namespace py = pybind11;
+void init_pattern(py::module &m) {
+
+    using pat = sls::patternParameters;
+    py::class_<pat> patternParameters(m, "patternParameters");
+
+    PYBIND11_NUMPY_DTYPE(pat, word, ioctrl, limits, loop, nloop, wait,
+                         waittime);
+
+    patternParameters.def(py::init());
+    patternParameters.def("numpy_view", [](py::object &obj) {
+        pat &o = obj.cast<pat &>();
+        return py::array_t<pat>(1, &o, obj);
+    });
+
+    py::class_<sls::Pattern> Pattern(m, "Pattern");
+    Pattern.def(py::init());
+    Pattern.def("load", &sls::Pattern::load);
+    Pattern.def("data", (pat * (sls::Pattern::*)()) & sls::Pattern::data,
+                py::return_value_policy::reference);
+}

python/src/scan.cpp

@@ -0,0 +1,39 @@
+#include <pybind11/chrono.h>
+#include <pybind11/numpy.h>
+#include <pybind11/operators.h>
+#include <pybind11/pybind11.h>
+#include <pybind11/stl.h>
+#include <sstream>
+#include "sls/sls_detector_defs.h"
+namespace py = pybind11;
+void init_scan(py::module &m) {
+
+    using sp = slsDetectorDefs::scanParameters;
+    py::class_<sp> scanParameters(m, "scanParameters");
+
+    scanParameters.def(py::init());
+
+    scanParameters.def(py::init<slsDetectorDefs::dacIndex, int, int, int>());
+    scanParameters.def(py::init<slsDetectorDefs::dacIndex, int, int, int, std::chrono::nanoseconds>());
+    scanParameters.def_readwrite("enable", &sp::enable);
+    scanParameters.def_readwrite("dacInd", &sp::dacInd);
+    scanParameters.def_readwrite("startOffset", &sp::startOffset);
+    scanParameters.def_readwrite("stopOffset", &sp::stopOffset);
+    scanParameters.def_readwrite("stepSize", &sp::stepSize);
+    scanParameters.def_readwrite("dacSettleTime_ns", &sp::dacSettleTime_ns);
+    scanParameters.def("__repr__", [](const sp &a){
+        std::ostringstream oss;
+        auto indent = "  ";
+        oss << "<scanParameters>\n";
+        oss << indent << "enable: " <<  a.enable << '\n';
+        oss << indent << "dacInd: " <<  a.dacInd << '\n';
+        oss << indent << "startOffset: " <<  a.startOffset << '\n';
+        oss << indent << "stopOffset: " <<  a.stopOffset << '\n';
+        oss << indent << "stepSize: " <<  a.stepSize << '\n';
+        oss << indent << "dacSettleTime_ns: " <<  a.dacSettleTime_ns;
+        return oss.str();
+    });
+
+
+
+}

serverBin/ctbDetectorServer_developer

@@ -0,0 +1 @@
+../slsDetectorServers/ctbDetectorServer/bin/ctbDetectorServer_developer

serverBin/ctbDetectorServerv5.0.0

@@ -1 +0,0 @@
-../slsDetectorServers/ctbDetectorServer/bin/ctbDetectorServerv5.0.0

serverBin/eigerDetectorServer_developer

@@ -0,0 +1 @@
+../slsDetectorServers/eigerDetectorServer/bin/eigerDetectorServer_developer

serverBin/eigerDetectorServerv5.0.0

@@ -1 +0,0 @@
-../slsDetectorServers/eigerDetectorServer/bin/eigerDetectorServerv5.0.0

serverBin/gotthard2DetectorServer_developer

@@ -0,0 +1 @@
+../slsDetectorServers/gotthard2DetectorServer/bin/gotthard2DetectorServer_developer

serverBin/gotthard2DetectorServerv5.0.0

@@ -1 +0,0 @@
-../slsDetectorServers/gotthard2DetectorServer/bin/gotthard2DetectorServerv5.0.0

serverBin/gotthardDetectorServer_developer

@@ -0,0 +1 @@
+../slsDetectorServers/gotthardDetectorServer/bin/gotthardDetectorServer_developer

serverBin/gotthardDetectorServerv5.0.0

@@ -1 +0,0 @@
-../slsDetectorServers/gotthardDetectorServer/bin/gotthardDetectorServerv5.0.0

serverBin/jungfrauDetectorServer_developer

@@ -0,0 +1 @@
+../slsDetectorServers/jungfrauDetectorServer/bin/jungfrauDetectorServer_developer

serverBin/jungfrauDetectorServerv5.0.0

@@ -1 +0,0 @@
-../slsDetectorServers/jungfrauDetectorServer/bin/jungfrauDetectorServerv5.0.0

serverBin/moenchDetectorServer_developer

@@ -0,0 +1 @@
+../slsDetectorServers/moenchDetectorServer/bin/moenchDetectorServer_developer

serverBin/moenchDetectorServerv5.0.0

@@ -1 +0,0 @@
-../slsDetectorServers/moenchDetectorServer/bin/moenchDetectorServerv5.0.0

serverBin/mythen3DetectorServer_developer

@@ -0,0 +1 @@
+../slsDetectorServers/mythen3DetectorServer/bin/mythen3DetectorServer_developer

serverBin/mythen3DetectorServerv5.0.0

@@ -1 +0,0 @@
-../slsDetectorServers/mythen3DetectorServer/bin/mythen3DetectorServerv5.0.0

settingsdir/mythen/fast/calibration.snxxx

@@ -1 +0,0 @@
-800 10

settingsdir/mythen/fast/fast.cal

@@ -1 +0,0 @@
-829 9.3

settingsdir/mythen/highgain/calibration.snxxx

@@ -1 +0,0 @@
-800 10

settingsdir/mythen/highgain/highgain.cal

@@ -1 +0,0 @@
-804 15.0

settingsdir/mythen/standard/calibration.snxxx

@@ -1 +0,0 @@
-800 10

settingsdir/mythen/standard/standard.cal

@@ -1 +0,0 @@
-817 11.6

slsDetectorGui/forms/form_tab_settings.ui

@@ -32,17 +32,23 @@
    <string>Form</string>
   </property>
   <layout class="QGridLayout" name="gridLayout_2">
-   <item row="1" column="2">
-    <widget class="QSpinBox" name="spinThreshold">
+   <item row="1" column="4">
+    <widget class="QSpinBox" name="spinThreshold3">
      <property name="enabled">
       <bool>false</bool>
      </property>
      <property name="minimumSize">
       <size>
-       <width>0</width>
+       <width>140</width>
        <height>25</height>
       </size>
      </property>
+     <property name="maximumSize">
+      <size>
+       <width>140</width>
+       <height>16777215</height>
+      </size>
+     </property>
      <property name="keyboardTracking">
       <bool>false</bool>
      </property>
@@ -63,10 +69,69 @@
      </property>
     </widget>
    </item>
-   <item row="0" column="1">
-    <spacer name="horizontalSpacer">
+   <item row="1" column="2">
+    <widget class="QSpinBox" name="spinThreshold">
+     <property name="enabled">
+      <bool>false</bool>
+     </property>
+     <property name="minimumSize">
+      <size>
+       <width>140</width>
+       <height>25</height>
+      </size>
+     </property>
+     <property name="maximumSize">
+      <size>
+       <width>140</width>
+       <height>16777215</height>
+      </size>
+     </property>
+     <property name="keyboardTracking">
+      <bool>false</bool>
+     </property>
+     <property name="suffix">
+      <string> eV</string>
+     </property>
+     <property name="minimum">
+      <number>-100000</number>
+     </property>
+     <property name="maximum">
+      <number>100000</number>
+     </property>
+     <property name="singleStep">
+      <number>100</number>
+     </property>
+     <property name="value">
+      <number>-1</number>
+     </property>
+    </widget>
+   </item>
+   <item row="2" column="0">
+    <widget class="QLabel" name="lblDynamicRange">
+     <property name="enabled">
+      <bool>false</bool>
+     </property>
+     <property name="minimumSize">
+      <size>
+       <width>110</width>
+       <height>0</height>
+      </size>
+     </property>
+     <property name="maximumSize">
+      <size>
+       <width>110</width>
+       <height>16777215</height>
+      </size>
+     </property>
+     <property name="text">
+      <string>Dynamic Range:</string>
+     </property>
+    </widget>
+   </item>
+   <item row="3" column="2">
+    <spacer name="verticalSpacer">
      <property name="orientation">
-      <enum>Qt::Horizontal</enum>
+      <enum>Qt::Vertical</enum>
      </property>
      <property name="sizeType">
       <enum>QSizePolicy::Fixed</enum>
@@ -74,7 +139,7 @@
      <property name="sizeHint" stdset="0">
       <size>
        <width>20</width>
-       <height>20</height>
+       <height>190</height>
       </size>
      </property>
     </spacer>
@@ -86,10 +151,16 @@
      </property>
      <property name="minimumSize">
       <size>
-       <width>0</width>
+       <width>140</width>
        <height>25</height>
       </size>
      </property>
+     <property name="maximumSize">
+      <size>
+       <width>140</width>
+       <height>16777215</height>
+      </size>
+     </property>
      <item>
       <property name="text">
        <string>1.67772e+07</string>
@@ -112,21 +183,102 @@
      </item>
     </widget>
    </item>
-   <item row="0" column="3">
-    <spacer name="horizontalSpacer_2">
-     <property name="orientation">
-      <enum>Qt::Horizontal</enum>
+   <item row="1" column="6">
+    <widget class="QPushButton" name="btnSetThreshold">
+     <property name="enabled">
+      <bool>true</bool>
      </property>
-     <property name="sizeType">
-      <enum>QSizePolicy::Expanding</enum>
+     <property name="sizePolicy">
+      <sizepolicy hsizetype="Fixed" vsizetype="Preferred">
+       <horstretch>0</horstretch>
+       <verstretch>0</verstretch>
+      </sizepolicy>
      </property>
-     <property name="sizeHint" stdset="0">
+     <property name="minimumSize">
       <size>
-       <width>20</width>
-       <height>20</height>
+       <width>100</width>
+       <height>30</height>
       </size>
      </property>
-    </spacer>
+     <property name="maximumSize">
+      <size>
+       <width>16777215</width>
+       <height>30</height>
+      </size>
+     </property>
+     <property name="palette">
+      <palette>
+       <active>
+        <colorrole role="Shadow">
+         <brush brushstyle="SolidPattern">
+          <color alpha="255">
+           <red>20</red>
+           <green>20</green>
+           <blue>20</blue>
+          </color>
+         </brush>
+        </colorrole>
+       </active>
+       <inactive>
+        <colorrole role="Shadow">
+         <brush brushstyle="SolidPattern">
+          <color alpha="255">
+           <red>20</red>
+           <green>20</green>
+           <blue>20</blue>
+          </color>
+         </brush>
+        </colorrole>
+       </inactive>
+       <disabled>
+        <colorrole role="Shadow">
+         <brush brushstyle="SolidPattern">
+          <color alpha="255">
+           <red>20</red>
+           <green>20</green>
+           <blue>20</blue>
+          </color>
+         </brush>
+        </colorrole>
+       </disabled>
+      </palette>
+     </property>
+     <property name="focusPolicy">
+      <enum>Qt::TabFocus</enum>
+     </property>
+     <property name="text">
+      <string>Set</string>
+     </property>
+     <property name="icon">
+      <iconset resource="../include/icons.qrc">
+       <normaloff>:/icons/images/rightArrow.png</normaloff>:/icons/images/rightArrow.png</iconset>
+     </property>
+     <property name="flat">
+      <bool>false</bool>
+     </property>
+    </widget>
+   </item>
+   <item row="0" column="0">
+    <widget class="QLabel" name="lblSettings">
+     <property name="enabled">
+      <bool>true</bool>
+     </property>
+     <property name="minimumSize">
+      <size>
+       <width>110</width>
+       <height>0</height>
+      </size>
+     </property>
+     <property name="maximumSize">
+      <size>
+       <width>110</width>
+       <height>16777215</height>
+      </size>
+     </property>
+     <property name="text">
+      <string>Settings:</string>
+     </property>
+    </widget>
    </item>
    <item row="0" column="2">
     <widget class="QComboBox" name="comboSettings">
@@ -141,10 +293,16 @@
      </property>
      <property name="minimumSize">
       <size>
-       <width>0</width>
+       <width>140</width>
        <height>25</height>
       </size>
      </property>
+     <property name="maximumSize">
+      <size>
+       <width>140</width>
+       <height>16777215</height>
+      </size>
+     </property>
      <property name="toolTip">
       <string>Settings of the detector. 
  #settings#</string>
@@ -266,40 +424,10 @@
      </item>
     </widget>
    </item>
-   <item row="1" column="0">
-    <widget class="QLabel" name="lblThreshold">
-     <property name="enabled">
-      <bool>false</bool>
-     </property>
-     <property name="text">
-      <string>Threshold:</string>
-     </property>
-    </widget>
-   </item>
-   <item row="2" column="0">
-    <widget class="QLabel" name="lblDynamicRange">
-     <property name="enabled">
-      <bool>false</bool>
-     </property>
-     <property name="text">
-      <string>Dynamic Range:</string>
-     </property>
-    </widget>
-   </item>
-   <item row="0" column="0">
-    <widget class="QLabel" name="lblSettings">
-     <property name="enabled">
-      <bool>true</bool>
-     </property>
-     <property name="text">
-      <string>Settings:</string>
-     </property>
-    </widget>
-   </item>
-   <item row="3" column="2">
-    <spacer name="verticalSpacer">
+   <item row="0" column="1">
+    <spacer name="horizontalSpacer">
      <property name="orientation">
-      <enum>Qt::Vertical</enum>
+      <enum>Qt::Horizontal</enum>
      </property>
      <property name="sizeType">
       <enum>QSizePolicy::Fixed</enum>
@@ -307,7 +435,82 @@
      <property name="sizeHint" stdset="0">
       <size>
        <width>20</width>
-       <height>190</height>
+       <height>20</height>
+      </size>
+     </property>
+    </spacer>
+   </item>
+   <item row="1" column="0">
+    <widget class="QLabel" name="lblThreshold">
+     <property name="enabled">
+      <bool>false</bool>
+     </property>
+     <property name="minimumSize">
+      <size>
+       <width>110</width>
+       <height>0</height>
+      </size>
+     </property>
+     <property name="maximumSize">
+      <size>
+       <width>110</width>
+       <height>16777215</height>
+      </size>
+     </property>
+     <property name="text">
+      <string>Threshold:</string>
+     </property>
+    </widget>
+   </item>
+   <item row="1" column="3">
+    <widget class="QSpinBox" name="spinThreshold2">
+     <property name="enabled">
+      <bool>false</bool>
+     </property>
+     <property name="minimumSize">
+      <size>
+       <width>140</width>
+       <height>25</height>
+      </size>
+     </property>
+     <property name="maximumSize">
+      <size>
+       <width>140</width>
+       <height>16777215</height>
+      </size>
+     </property>
+     <property name="keyboardTracking">
+      <bool>false</bool>
+     </property>
+     <property name="suffix">
+      <string> eV</string>
+     </property>
+     <property name="minimum">
+      <number>-100000</number>
+     </property>
+     <property name="maximum">
+      <number>100000</number>
+     </property>
+     <property name="singleStep">
+      <number>100</number>
+     </property>
+     <property name="value">
+      <number>-1</number>
+     </property>
+    </widget>
+   </item>
+   <item row="1" column="7">
+    <spacer name="horizontalSpacer_2">
+     <property name="orientation">
+      <enum>Qt::Horizontal</enum>
+     </property>
+     <property name="sizeType">
+      <enum>QSizePolicy::Expanding</enum>
+     </property>
+     <property name="sizeHint" stdset="0">
+      <size>
+       <width>20</width>
+       <height>20</height>
       </size>
      </property>
     </spacer>
@@ -317,6 +520,9 @@
  <tabstops>
   <tabstop>comboSettings</tabstop>
   <tabstop>spinThreshold</tabstop>
+  <tabstop>spinThreshold2</tabstop>
+  <tabstop>spinThreshold3</tabstop>
+  <tabstop>btnSetThreshold</tabstop>
   <tabstop>comboDynamicRange</tabstop>
  </tabstops>
  <resources>

slsDetectorGui/include/qTabSettings.h

@@ -14,6 +14,7 @@ class qTabSettings : public QWidget, private Ui::TabSettingsObject {
     void SetSettings(int index);
     void SetDynamicRange(int index);
     void SetThresholdEnergy(int index);
+    void SetThresholdEnergies();
 
   private:
     void SetupWidgetWindow();
@@ -23,6 +24,7 @@ class qTabSettings : public QWidget, private Ui::TabSettingsObject {
     void GetSettings();
     void GetDynamicRange();
     void GetThresholdEnergy();
+    void GetThresholdEnergies();
 
     sls::Detector *det;
     enum {

slsDetectorGui/src/qTabSettings.cpp

@@ -14,14 +14,24 @@ qTabSettings::~qTabSettings() {}
 
 void qTabSettings::SetupWidgetWindow() {
 
+    spinThreshold2->hide();
+    spinThreshold3->hide();
+    btnSetThreshold->hide();
+    btnSetThreshold->setEnabled(false);
     // enabling according to det type
     slsDetectorDefs::detectorType detType = det->getDetectorType().squash();
     if (detType == slsDetectorDefs::MYTHEN3) {
-        lblSettings->setEnabled(false);
-        comboSettings->setEnabled(false);
-
         lblDynamicRange->setEnabled(true);
         comboDynamicRange->setEnabled(true);
+
+        spinThreshold2->show();
+        spinThreshold3->show();
+        lblThreshold->setEnabled(true);
+        spinThreshold->setEnabled(true);
+        spinThreshold2->setEnabled(true);
+        spinThreshold3->setEnabled(true);
+        btnSetThreshold->setEnabled(true);
+        btnSetThreshold->show();
         // disable dr
         QStandardItemModel *model =
             qobject_cast<QStandardItemModel *>(comboDynamicRange->model());
@@ -34,7 +44,6 @@ void qTabSettings::SetupWidgetWindow() {
             item = model->itemFromIndex(index);
             item->setEnabled(false);
         }
-
     } else if (detType == slsDetectorDefs::EIGER) {
         lblDynamicRange->setEnabled(true);
         comboDynamicRange->setEnabled(true);
@@ -48,6 +57,10 @@ void qTabSettings::SetupWidgetWindow() {
         SetupDetectorSettings();
     }
     spinThreshold->setValue(-1);
+    if (detType == slsDetectorDefs::MYTHEN3) {
+        spinThreshold2->setValue(-1);
+        spinThreshold3->setValue(-1);
+    }
     Initialization();
     // default for the disabled
     GetDynamicRange();
@@ -104,6 +117,11 @@ void qTabSettings::SetupDetectorSettings() {
             item[(int)G4_HIGHGAIN]->setEnabled(true);
             item[(int)G4_LOWGAIN]->setEnabled(true);
             break;
+        case slsDetectorDefs::MYTHEN3:
+            item[(int)STANDARD]->setEnabled(true);
+            item[(int)FAST]->setEnabled(true);
+            item[(int)HIGHGAIN]->setEnabled(true);
+            break;
         default:
             LOG(logDEBUG) << "Unknown detector type. Exiting GUI.";
             qDefs::Message(qDefs::CRITICAL,
@@ -126,7 +144,13 @@ void qTabSettings::Initialization() {
                 SLOT(SetDynamicRange(int)));
 
     // Threshold
-    if (spinThreshold->isEnabled())
+    // m3
+    if (btnSetThreshold->isEnabled()) {
+        connect(btnSetThreshold, SIGNAL(clicked()), this,
+                SLOT(SetThresholdEnergies()));
+    }
+    // eiger
+    else if (spinThreshold->isEnabled())
         connect(spinThreshold, SIGNAL(valueChanged(int)), this,
                 SLOT(SetThresholdEnergy(int)));
 }
@@ -169,7 +193,7 @@ void qTabSettings::SetSettings(int index) {
     CATCH_HANDLE("Could not set settings.", "qTabSettings::SetSettings", this,
                  &qTabSettings::GetSettings)
     // threshold
-    if (spinThreshold->isEnabled()) {
+    if (det->getDetectorType().squash() == slsDetectorDefs::EIGER) {
         SetThresholdEnergy(spinThreshold->value());
     }
 }
@@ -233,6 +257,23 @@ void qTabSettings::SetDynamicRange(int index) {
                  &qTabSettings::GetDynamicRange)
 }
 
+void qTabSettings::GetThresholdEnergies() {
+    LOG(logDEBUG) << "Getting theshold energies";
+    disconnect(btnSetThreshold, SIGNAL(clicked()), this,
+               SLOT(SetThresholdEnergies()));
+    try {
+        auto retval = det->getAllThresholdEnergy().tsquash(
+            "Inconsistent threhsold energies for all detectors.");
+        spinThreshold->setValue(retval[0]);
+        spinThreshold2->setValue(retval[1]);
+        spinThreshold3->setValue(retval[2]);
+    }
+    CATCH_DISPLAY("Could not get threshold energy.",
+                  "qTabDataOutput::GetThresholdEnergies")
+    connect(btnSetThreshold, SIGNAL(clicked()), this,
+            SLOT(SetThresholdEnergies()));
+}
+
 void qTabSettings::GetThresholdEnergy() {
     LOG(logDEBUG) << "Getting theshold energy";
     disconnect(spinThreshold, SIGNAL(valueChanged(int)), this,
@@ -248,6 +289,23 @@ void qTabSettings::GetThresholdEnergy() {
             SLOT(SetThresholdEnergy(int)));
 }
 
+void qTabSettings::SetThresholdEnergies() {
+    std::array<int, 3> eV = {spinThreshold->value(), spinThreshold2->value(),
+                             spinThreshold3->value()};
+    slsDetectorDefs::detectorSettings sett =
+        static_cast<slsDetectorDefs::detectorSettings>(
+            comboSettings->currentIndex());
+    LOG(logINFO) << "Setting Threshold Energies to " << sls::ToString(eV)
+                 << " (eV)";
+    try {
+        det->setThresholdEnergy(eV, sett);
+    }
+    CATCH_DISPLAY("Could not get threshold energies.",
+                  "qTabSettings::SetThresholdEnergies")
+    // set the right value anyway (due to tolerance)
+    GetThresholdEnergies();
+}
+
 void qTabSettings::SetThresholdEnergy(int index) {
     LOG(logINFO) << "Setting Threshold Energy to " << index << " eV";
     try {
@@ -270,8 +328,14 @@ void qTabSettings::Refresh() {
         GetDynamicRange();
     }
 
-    if (spinThreshold->isEnabled())
+    // m3
+    if (btnSetThreshold->isEnabled())
+        GetThresholdEnergies();
+    // eiger
+    else if (spinThreshold->isEnabled()) {
+        LOG(logINFOBLUE) << "calling it!";
         GetThresholdEnergy();
+    }
 
     LOG(logDEBUG) << "**Updated Settings Tab";
 }

slsDetectorServers/ctbDetectorServer/CMakeLists.txt

@@ -22,6 +22,7 @@ add_executable(ctbDetectorServer_virtual
 include_directories(
     ../slsDetectorServer/include
     ../../slsSupportLib/include
+    ../../slsDetectorSoftware/include/sls/
 )
 
 target_include_directories(ctbDetectorServer_virtual

slsDetectorServers/ctbDetectorServer/Makefile

@@ -2,10 +2,11 @@ current_dir = $(shell pwd)
 main_inc = ../slsDetectorServer/include/
 main_src = ../slsDetectorServer/src/
 support_lib = ../../slsSupportLib/include/
+det_lib = ../../slsDetectorSoftware/include/sls/
 
 CROSS  		= bfin-uclinux-
 CC    		= $(CROSS)gcc
-CFLAGS		+=  -Wall -std=gnu99 -DCHIPTESTBOARDD  -DSTOP_SERVER -I$(main_inc) -I$(support_lib) -I$(current_dir) #-DDEBUG1 #-DVERBOSEI #-DVERBOSE 
+CFLAGS		+=  -Wall -std=gnu99 -DCHIPTESTBOARDD  -DSTOP_SERVER -I$(main_inc) -I$(support_lib) -I$(det_lib) -I$(current_dir) #-DDEBUG1 #-DVERBOSEI #-DVERBOSE 
 LDLIBS		+= 	-lm -lrt -pthread
 PROGS		= 	ctbDetectorServer 
 DESTDIR		?= 	bin

slsDetectorServers/eigerDetectorServer/slsDetectorFunctionList.c

@@ -669,7 +669,9 @@ void allocateDetectorStructureMemory() {
     (detectorModules)->reg = 0;
     (detectorModules)->iodelay = 0;
     (detectorModules)->tau = 0;
-    (detectorModules)->eV = 0;
+    (detectorModules)->eV[0] = 0;
+    (detectorModules)->eV[1] = 0;
+    (detectorModules)->eV[2] = 0;
     thisSettings = UNINITIALIZED;
 
     // if trimval requested, should return -1 to acknowledge unknown
@@ -1090,8 +1092,8 @@ int setModule(sls_detector_module myMod, char *mess) {
     }
 
     // threshold
-    if (myMod.eV >= 0)
-        setThresholdEnergy(myMod.eV);
+    if (myMod.eV[0] >= 0)
+        setThresholdEnergy(myMod.eV[0]);
     else {
         // (loading a random trim file) (dont return fail)
         setSettings(UNDEFINED);
@@ -2554,8 +2556,8 @@ int copyModule(sls_detector_module *destMod, sls_detector_module *srcMod) {
         destMod->iodelay = srcMod->iodelay;
     if (srcMod->tau >= 0)
         destMod->tau = srcMod->tau;
-    if (srcMod->eV >= 0)
-        destMod->eV = srcMod->eV;
+    if (srcMod->eV[0] >= 0)
+        destMod->eV[0] = srcMod->eV[0];
     LOG(logDEBUG1, ("Copying register %x (%x)\n", destMod->reg, srcMod->reg));
 
     if (destMod->nchan != 0) {

slsDetectorServers/gotthard2DetectorServer/slsDetectorFunctionList.c

@@ -409,9 +409,9 @@ void setupDetector() {
 
     // pll defines
     ALTERA_PLL_C10_SetDefines(REG_OFFSET, BASE_READOUT_PLL, BASE_SYSTEM_PLL,
-                              PLL_RESET_REG, PLL_RESET_REG,
-                              PLL_RESET_READOUT_MSK, PLL_RESET_SYSTEM_MSK,
-                              READOUT_PLL_VCO_FREQ_HZ, SYSTEM_PLL_VCO_FREQ_HZ);
+                              PLL_RESET_REG, PLL_RESET_READOUT_MSK,
+                              PLL_RESET_SYSTEM_MSK, READOUT_PLL_VCO_FREQ_HZ,
+                              SYSTEM_PLL_VCO_FREQ_HZ);
     ALTERA_PLL_C10_ResetPLL(READOUT_PLL);
     ALTERA_PLL_C10_ResetPLL(SYSTEM_PLL);
     // hv

slsDetectorServers/moenchDetectorServer/CMakeLists.txt

@@ -20,6 +20,7 @@ add_executable(moenchDetectorServer_virtual
 include_directories(
     ../slsDetectorServer/include
     ../../slsSupportLib/include
+    ../../slsDetectorSoftware/include/sls/
 )
 
 target_include_directories(moenchDetectorServer_virtual

slsDetectorServers/moenchDetectorServer/Makefile

@@ -2,10 +2,11 @@ current_dir = $(shell pwd)
 main_inc = ../slsDetectorServer/include/
 main_src = ../slsDetectorServer/src/
 support_lib = ../../slsSupportLib/include/
+det_lib = ../../slsDetectorSoftware/include/sls/
 
 CROSS  		= bfin-uclinux-
 CC    		= $(CROSS)gcc
-CFLAGS		+=  -Wall -std=gnu99 -DMOENCHD  -DSTOP_SERVER -I$(main_inc) -I$(support_lib) -I$(current_dir)#-DVERBOSEI #-DVERBOSE 
+CFLAGS		+=  -Wall -std=gnu99 -DMOENCHD  -DSTOP_SERVER -I$(main_inc) -I$(support_lib) -I$(det_lib) -I$(current_dir)#-DVERBOSEI #-DVERBOSE 
 LDLIBS		+= 	-lm -lrt -pthread  
 PROGS		= 	moenchDetectorServer 
 DESTDIR		?= 	bin