With corrections

Specialfile

RELEASE.txt

@@ -31,7 +31,7 @@ This document describes the differences between v7.0.0 and v6.x.x
 - rx_arping
 - rx_threadsids max is now 9 (breaking api)
 - fixed datastream disabling for eiger. Its only available in 10g mode.
-- m3 server crash (vthrehsold)
+- m3 server crash (vthrehsold dac names were not provided)
 - allow vtrim to be interpolated for Eiger settings
 - m3 setThresholdEnergy and setAllThresholdEnergy was overwriting gaincaps with settings enum
 - can set localhost with virtual server with minimum configuration: (hostname localhost, rx_hostname localhost, udp_dstip auto)
@@ -39,10 +39,24 @@ This document describes the differences between v7.0.0 and v6.x.x
 - current frame index points to listened frame index (not processed index)
 - when in discard partial frames or empty mode, the frame number doesnt increase by 1, it increases to that number (so its faster)
 - file write disabled by default
+- eiger 12 bit mode
 - start non blocking acquisition at modular level
+- connect master commands to api (allow set master for eiger)
+--ignore-config command line
+- command line argument 'master' mainly for virtual servers (also master/top for real eiger), only one virtual server for eiger, use command lines for master/top
+- stop servers also check for errors at startup( in case it was running with an older version)
 - hostname cmd failed when connecting to servers in update mode (ctb, moench, jungfrau, eiger)
 - missingpackets signed (negative => extra packets)
-
+- framescaught and frameindex now returns a vector for each port
+- progress looks at activated or enabled ports, so progress does not stagnate
+- (eiger) disable datastreaming also for virtual servers only for 10g
+- missing packets also takes care of disabled ports
+- added geometry to metadata
+- 10g eiger nextframenumber get fixed.
+- stop, able to set nextframenumber to a consistent (max + 1) for all modules if different (eiger/ctb/jungfrau/moench)
+- ctb: can set names for all the dacs
+- fpga/kernel programming, checks if drive is a special file and not a normal file
+- gotthard 25 um image reconstructed in gui and virtual hdf5 (firmware updated for slave to reverse channels)
 
 2. Resolved Issues
 ==================

python/scripts/generate_functions.py

@@ -6,49 +6,57 @@ sls::Detector class. The tool needs the libclang bindings
 to be installed. 
 
 When the Detector API is updated this file should be run
-manually
+manually.
 """
 from clang import cindex
 import subprocess
 import argparse
+import sys
+import time
+from pathlib import Path
+from parse import system_include_paths, clang_format_version
 
+REDC = '\033[91m'
+GREENC = '\033[92m'
+ENDC = '\033[0m'
+def red(msg):
+    return f'{REDC}{msg}{ENDC}'
+
+def green(msg):
+    return f'{GREENC}{msg}{ENDC}'
+
+def check_clang_format_version(required_version):
+    if (ver := clang_format_version()) != required_version:
+        msg = red(f'Clang format version {required_version} required, detected: {ver}. Bye!')
+        print(msg)
+        sys.exit(1)
+    else:
+        msg = green(f'Found clang-format version {ver}')
+        print(msg)
+
+def check_for_compile_commands_json(path):
+    # print(f"Looking for compile data base in: {path}")
+    compile_data_base_file = path/'compile_commands.json'
+    if not compile_data_base_file.exists():
+        msg = red(f"No compile_commands.json file found in {path}. Bye!")
+        print(msg)
+        sys.exit(1)
+    else:
+        msg = green(f'Found: {compile_data_base_file}')
+        print(msg)
 
-from parse import system_include_paths
 
 default_build_path = "/home/l_frojdh/sls/build/"
 fpath = "../../slsDetectorSoftware/src/Detector.cpp"
 
 
-parser = argparse.ArgumentParser()
-parser.add_argument(
-    "-p",
-    "--build_path",
-    help="Path to the build database",
-    type=str,
-    default=default_build_path,
-)
-cargs = parser.parse_args()
 
-db = cindex.CompilationDatabase.fromDirectory(cargs.build_path)
-index = cindex.Index.create()
-args = db.getCompileCommands(fpath)
-args = list(iter(args).__next__().arguments)[0:-1]
-args = args + "-x c++ --std=c++11".split()
-syspath = system_include_paths("clang++")
-incargs = ["-I" + inc for inc in syspath]
-args = args + incargs
-
-
-tu = index.parse(fpath, args=args)
 
 
 m = []
 ag = []
-
 lines = []
-
 ag2 = []
-
 cn = []
 
 def get_arguments(node):
@@ -66,7 +74,7 @@ def get_arguments_with_default(node):
     args = []
     for arg in node.get_arguments():
         tokens = [t.spelling for t in arg.get_tokens()]
-        print(tokens)
+        # print(tokens)
         if '=' in tokens:
             if arg.type.spelling == "sls::Positions": #TODO! automate
                 args.append("py::arg() = Positions{}")
@@ -111,33 +119,67 @@ def visit(node):
                     lines.append(
                         f'.def("{child.spelling}",{fs} &Detector::{child.spelling}{args})'
                     )
+                    if cargs.verbose:
+                        print(f'&Detector::{child.spelling}{args})')
                     cn.append(child)
     for child in node.get_children():
         visit(child)
 
-        # .def("setRxHostname",
-        #      (void (Detector::*)(const std::string &, Positions)) &
-        #          Detector::setRxHostname,
-        #      py::arg(), py::arg() = Positions{})
-        # .def("setRxHostname",
-        #      (void (Detector::*)(const std::vector<std::string> &)) &
-        #          Detector::setRxHostname,
-        #      py::arg())
 
+if __name__ == "__main__":
+    parser = argparse.ArgumentParser()
+    parser.add_argument(
+        "-p",
+        "--build_path",
+        help="Path to the build database",
+        type=Path,
+        default=default_build_path,
+    )
+    parser.add_argument(
+        "-v",
+        "--verbose",
+        help="more output",
+        action='store_true',
+    )
+    cargs = parser.parse_args()
+    
+    check_clang_format_version(12)
+    check_for_compile_commands_json(cargs.build_path)
 
-visit(tu.cursor)
+    print("Parsing functions in Detector.h - ", end = "", flush = True)
+    t0 = time.perf_counter()
+    #parse functions
+    db = cindex.CompilationDatabase.fromDirectory(cargs.build_path)
+    index = cindex.Index.create()
+    args = db.getCompileCommands(fpath)
+    args = list(iter(args).__next__().arguments)[0:-1]
+    args = args + "-x c++ --std=c++11".split()
+    syspath = system_include_paths("clang++")
+    incargs = ["-I" + inc for inc in syspath]
+    args = args + incargs
+    tu = index.parse(fpath, args=args)
+    visit(tu.cursor)
+    print(green('OK'))
+    print(f'Parsing took {time.perf_counter()-t0:.3f}s')
 
+    print("Read detector_in.cpp - ", end = "")
+    with open("../src/detector_in.cpp") as f:
+        data = f.read()
+    s = "".join(lines)
+    s += ";"
+    text = data.replace("[[FUNCTIONS]]", s)
+    warning = "/* WARINING This file is auto generated any edits might be overwritten without warning */\n\n"
+    print(green("OK"))
+    print("Writing to detector.cpp - ", end = "")
+    with open("../src/detector.cpp", "w") as f:
+        f.write(warning)
+        f.write(text)
+    print(green('OK'))
 
-with open("../src/detector_in.cpp") as f:
-    data = f.read()
-s = "".join(lines)
-s += ";"
-text = data.replace("[[FUNCTIONS]]", s)
-warning = "/* WARINING This file is auto generated any edits might be overwritten without warning */\n\n"
-with open("../src/detector.cpp", "w") as f:
-    f.write(warning)
-    f.write(text)
-
-# run clang format on the output
-subprocess.run(["clang-format", "../src/detector.cpp", "-i"])
+    # run clang format on the output
+    print('Running clang format on generated source -', end = "")
+    subprocess.run(["clang-format", "../src/detector.cpp", "-i"])
+    print(green(" OK"))
 
+    print("Changes since last commit:")
+    subprocess.run(['git',  'diff', '../src/detector.cpp'])

python/scripts/parse.py

@@ -5,6 +5,12 @@ import subprocess
 from subprocess import PIPE
 import os
 
+def clang_format_version():
+    p = subprocess.run(['clang-format', '--version'], capture_output = True)
+    ver = p.stdout.decode().split()[2]
+    major = int(ver.split('.')[0])
+    return major
+
 
 def remove_comments(text):
     def replacer(match):

python/slsdet/ctb.py

@@ -1,43 +1,45 @@
 # SPDX-License-Identifier: LGPL-3.0-or-other
 # Copyright (C) 2021 Contributors to the SLS Detector Package
-from .detector import Detector
+from .detector import Detector, freeze
 from .utils import element_if_equal
-from .dacs import DetectorDacs
+from .dacs import DetectorDacs, NamedDacs
 import _slsdet
 dacIndex = _slsdet.slsDetectorDefs.dacIndex
 from .detector_property import DetectorProperty
 
-class CtbDacs(DetectorDacs):
-    """
-    Ctb dacs
-    """
-    _dacs = [('dac0',  dacIndex(0), 0, 4000,    1400),
-             ('dac1',  dacIndex(1), 0, 4000,    1200),
-             ('dac2',  dacIndex(2), 0, 4000,    900),
-             ('dac3',  dacIndex(3), 0, 4000,    1050),
-             ('dac4',  dacIndex(4), 0, 4000,     1400),
-             ('dac5',  dacIndex(5), 0, 4000,    655),
-             ('dac6',  dacIndex(6), 0, 4000,    2000),
-             ('dac7',  dacIndex(7), 0, 4000,     1400),
-             ('dac8',  dacIndex(8), 0, 4000,    850),
-             ('dac9',  dacIndex(9), 0, 4000,    2000),
-             ('dac10', dacIndex(10), 0, 4000,    2294),
-             ('dac11', dacIndex(11), 0, 4000,    983),
-             ('dac12', dacIndex(12), 0, 4000,    1475),
-             ('dac13', dacIndex(13), 0, 4000,    1200),
-             ('dac14', dacIndex(14), 0, 4000,    1600),
-             ('dac15', dacIndex(15), 0, 4000,    1455),
-             ('dac16', dacIndex(16), 0, 4000,       0),
-             ('dac17', dacIndex(17), 0, 4000,    1000),
-            ]
-    _dacnames = [_d[0] for _d in _dacs]
+# class CtbDacs(DetectorDacs):
+#     """
+#     Ctb dacs
+#     """
+#     _dacs = [('dac0',  dacIndex(0), 0, 4000,    1400),
+#              ('dac1',  dacIndex(1), 0, 4000,    1200),
+#              ('dac2',  dacIndex(2), 0, 4000,    900),
+#              ('dac3',  dacIndex(3), 0, 4000,    1050),
+#              ('dac4',  dacIndex(4), 0, 4000,     1400),
+#              ('dac5',  dacIndex(5), 0, 4000,    655),
+#              ('dac6',  dacIndex(6), 0, 4000,    2000),
+#              ('dac7',  dacIndex(7), 0, 4000,     1400),
+#              ('dac8',  dacIndex(8), 0, 4000,    850),
+#              ('dac9',  dacIndex(9), 0, 4000,    2000),
+#              ('dac10', dacIndex(10), 0, 4000,    2294),
+#              ('dac11', dacIndex(11), 0, 4000,    983),
+#              ('dac12', dacIndex(12), 0, 4000,    1475),
+#              ('dac13', dacIndex(13), 0, 4000,    1200),
+#              ('dac14', dacIndex(14), 0, 4000,    1600),
+#              ('dac15', dacIndex(15), 0, 4000,    1455),
+#              ('dac16', dacIndex(16), 0, 4000,       0),
+#              ('dac17', dacIndex(17), 0, 4000,    1000),
+#             ]
+#     _dacnames = [_d[0] for _d in _dacs]
 
 from .utils import element
+@freeze
 class Ctb(Detector):
     def __init__(self, id = 0):
         super().__init__(id)
         self._frozen = False 
-        self._dacs = CtbDacs(self)
+        # self._dacs = CtbDacs(self)
+        self._dacs = NamedDacs(self)
     
     @property
     def dacs(self):

python/slsdet/dacs.py

@@ -36,6 +36,79 @@ class Dac(DetectorProperty):
         dacstr = ''.join([f'{item:5d}' for item in self.get()])
         return f'{self.__name__:15s}:{dacstr}'
 
+class NamedDacs:
+    """
+    New implementation of the detector dacs. Used at the momen for 
+    Ctb but should replace the old one for all detectors
+    """
+    _frozen = False
+    _direct_access = ['_detector', '_current', '_dacnames']
+    def __init__(self, detector):
+        self._detector = detector
+        self._current = 0
+
+        self._dacnames = [n.replace(" ", "") for n in detector.getDacNames()]
+        # # Populate the dacs
+        for i,name in enumerate(self._dacnames):
+            #name, enum, low, high, default, detector
+            setattr(self, name, Dac(name, dacIndex(i), 0, 4000, 1000, detector))
+
+        self._frozen = True
+
+    # def __getattr__(self, name):
+    #     return self.__getattribute__('_' + name)
+
+    def __setattr__(self, name, value):
+        if not self._frozen:
+            #durining init we need to be able to set up the class
+            super().__setattr__(name, value)
+        else:
+            #Later we restrict us to manipulate dacs and a few fields
+            if name in self._direct_access:
+                super().__setattr__(name, value)
+            elif name in self._dacnames:
+                return self.__getattribute__(name).__setitem__(slice(None, None, None), value)
+            else:
+                raise AttributeError(f'Dac not found: {name}')
+
+    def __next__(self):
+        if self._current >= len(self._dacnames):
+            self._current = 0
+            raise StopIteration
+        else:
+            self._current += 1
+            return self.__getattribute__(self._dacnames[self._current-1])
+            # return self.__getattr__(self._dacnames[self._current-1])
+
+    def __iter__(self):
+        return self
+
+    def __repr__(self):
+        r_str = ['========== DACS =========']
+        r_str += [repr(dac) for dac in self]
+        return '\n'.join(r_str)
+    def get_asarray(self):
+        """
+        Read the dacs into a numpy array with dimensions [ndacs, nmodules]
+        """
+        dac_array = np.zeros((len(self._dacnames), len(self._detector)))
+        for i, _d in enumerate(self):
+            dac_array[i,:] = _d[:]
+        return dac_array
+
+    def to_array(self):
+        return self.get_asarray()       
+
+    def set_from_array(self, dac_array):
+        """
+        Set the dacs from an numpy array with dac values. [ndacs, nmodules]
+        """
+        dac_array = dac_array.astype(np.int)
+        for i, _d in enumerate(self):
+            _d[:] = dac_array[i]
+
+    def from_array(self, dac_array):
+        self.set_from_array(dac_array)
 
 class DetectorDacs:
     _dacs = []
@@ -50,7 +123,7 @@ class DetectorDacs:
         # Index to support iteration
         self._current = 0
 
-        # Populate the dacs
+        # Name the attributes? 
         for _d in self._dacs:
             setattr(self, '_'+_d[0], Dac(*_d, detector))
 
@@ -59,7 +132,10 @@ class DetectorDacs:
     def __getattr__(self, name):
         return self.__getattribute__('_' + name)
 
-
+    @property
+    def dacnames(self):
+        return [_d[0] for _d in _dacs]
+        
     def __setattr__(self, name, value):
         if name in self._dacnames:
             return self.__getattribute__('_' + name).__setitem__(slice(None, None, None), value)

python/slsdet/detector.py

@@ -287,7 +287,7 @@ class Detector(CppDetectorApi):
 
         Note
         -----
-        [Eiger] Options: 4, 8, 16, 32. If set to 32, also sets clkdivider to 2 (quarter speed), else to 0 (full speed)\n
+        [Eiger] Options: 4, 8, 12, 16, 32. If set to 32, also sets clkdivider to 2 (quarter speed), else to 0 (full speed)\n
         [Mythen3] Options: 8, 16, 32 \n
         [Jungfrau][Gotthard][Ctb][Moench][Mythen3][Gotthard2] 16
         """
@@ -599,7 +599,7 @@ class Detector(CppDetectorApi):
     @property
     @element
     def rx_framescaught(self):
-        """Number of frames caught by receiver."""
+        """Number of frames caught by each port in receiver."""
         return self.getFramesCaught()
 
     @property
@@ -1474,6 +1474,19 @@ class Detector(CppDetectorApi):
     def trimval(self, value):
         ut.set_using_dict(self.setAllTrimbits, value)
 
+    @property
+    @element
+    def master(self):
+        """
+        [Eiger] Sets half module to master and others to slaves.\n
+        [Gotthard][Gotthard2][Mythen3][Eiger] Gets if the current module/ half module is master.
+        """
+        return self.getMaster()
+
+    @master.setter
+    def master(self, value):
+        ut.set_using_dict(self.setMaster, value)
+
     @property
     @element
     def lock(self):
@@ -1558,8 +1571,16 @@ class Detector(CppDetectorApi):
 
     @property
     def daclist(self):
-        """Gets the list of enums for every dac for this detector."""
-        return self.getDacList()
+        """
+        List of enums for every dac for this detector.
+        :setter: Only implemented for Chiptestboard
+        
+        """
+        return self.getDacNames()
+
+    @daclist.setter
+    def daclist(self, value):
+        self.setDacNames(value)
 
     @property
     def dacvalues(self):
@@ -1905,7 +1926,7 @@ class Detector(CppDetectorApi):
     @property
     @element
     def rx_frameindex(self):
-        """Current frame index received in receiver during acquisition."""
+        """Current frame index received for each port in receiver during acquisition."""
         return self.getRxCurrentFrameIndex()
 
     @property
@@ -2126,6 +2147,21 @@ class Detector(CppDetectorApi):
         """
         return ut.reduce_time(self.getMeasuredSubFramePeriod())
 
+    @property
+    @element
+    def top(self):
+        """[Eiger] Sets half module to top (1), else bottom.
+        
+        Note
+        -----
+        Advanced Function!
+        """
+        return self.getTop()
+
+    @top.setter
+    def top(self, value):
+        ut.set_using_dict(self.setTop, value)
+
     """
     ------------------<<<Jungfrau specific>>>-------------------------
     """

python/src/detector.cpp

@@ -1,8 +1,8 @@
-// SPDX-License-Identifier: LGPL-3.0-or-other
-// Copyright (C) 2021 Contributors to the SLS Detector Package
 /* WARINING This file is auto generated any edits might be overwritten without
  * warning */
 
+// SPDX-License-Identifier: LGPL-3.0-or-other
+// Copyright (C) 2021 Contributors to the SLS Detector Package
 #include <pybind11/chrono.h>
 #include <pybind11/operators.h>
 #include <pybind11/pybind11.h>
@@ -173,6 +173,12 @@ void init_det(py::module &m) {
         .def("setFlipRows",
              (void (Detector::*)(bool, sls::Positions)) & Detector::setFlipRows,
              py::arg(), py::arg() = Positions{})
+        .def("getMaster",
+             (Result<bool>(Detector::*)(sls::Positions) const) &
+                 Detector::getMaster,
+             py::arg() = Positions{})
+        .def("setMaster", (void (Detector::*)(bool, int)) & Detector::setMaster,
+             py::arg(), py::arg())
         .def("isVirtualDetectorServer",
              (Result<bool>(Detector::*)(sls::Positions) const) &
                  Detector::isVirtualDetectorServer,
@@ -487,13 +493,17 @@ void init_det(py::module &m) {
                  Detector::getReceiverStatus,
              py::arg() = Positions{})
         .def("getFramesCaught",
-             (Result<int64_t>(Detector::*)(sls::Positions) const) &
+             (Result<std::vector<int64_t>>(Detector::*)(sls::Positions) const) &
                  Detector::getFramesCaught,
              py::arg() = Positions{})
         .def("getNumMissingPackets",
              (Result<std::vector<int64_t>>(Detector::*)(sls::Positions) const) &
                  Detector::getNumMissingPackets,
              py::arg() = Positions{})
+        .def("getRxCurrentFrameIndex",
+             (Result<std::vector<int64_t>>(Detector::*)(sls::Positions) const) &
+                 Detector::getRxCurrentFrameIndex,
+             py::arg() = Positions{})
         .def("getNextFrameNumber",
              (Result<uint64_t>(Detector::*)(sls::Positions) const) &
                  Detector::getNextFrameNumber,
@@ -766,7 +776,7 @@ void init_det(py::module &m) {
                  Detector::getRxLastClientIP,
              py::arg() = Positions{})
         .def("getRxThreadIds",
-             (Result<std::array<pid_t, 8>>(Detector::*)(sls::Positions) const) &
+             (Result<std::array<pid_t, 9>>(Detector::*)(sls::Positions) const) &
                  Detector::getRxThreadIds,
              py::arg() = Positions{})
         .def("getRxArping",
@@ -1005,6 +1015,13 @@ void init_det(py::module &m) {
                                  sls::Positions)) &
                  Detector::setDataStream,
              py::arg(), py::arg(), py::arg() = Positions{})
+        .def("getTop",
+             (Result<bool>(Detector::*)(sls::Positions) const) &
+                 Detector::getTop,
+             py::arg() = Positions{})
+        .def("setTop",
+             (void (Detector::*)(bool, sls::Positions)) & Detector::setTop,
+             py::arg(), py::arg() = Positions{})
         .def("getChipVersion",
              (Result<double>(Detector::*)(sls::Positions) const) &
                  Detector::getChipVersion,
@@ -1263,10 +1280,6 @@ void init_det(py::module &m) {
              (Result<std::array<ns, 3>>(Detector::*)(sls::Positions) const) &
                  Detector::getGateDelayForAllGates,
              py::arg() = Positions{})
-        .def("getMaster",
-             (Result<bool>(Detector::*)(sls::Positions) const) &
-                 Detector::getMaster,
-             py::arg() = Positions{})
         .def("getChipStatusRegister",
              (Result<int>(Detector::*)(sls::Positions) const) &
                  Detector::getChipStatusRegister,
@@ -1414,6 +1427,19 @@ void init_det(py::module &m) {
              (void (Detector::*)(bool, sls::Positions)) &
                  Detector::setLEDEnable,
              py::arg(), py::arg() = Positions{})
+        .def("setDacNames",
+             (void (Detector::*)(const std::vector<std::string>)) &
+                 Detector::setDacNames,
+             py::arg())
+        .def("getDacNames", (std::vector<std::string>(Detector::*)() const) &
+                                Detector::getDacNames)
+        .def("getDacIndex",
+             (defs::dacIndex(Detector::*)(const std::string &)) &
+                 Detector::getDacIndex,
+             py::arg())
+        .def("getDacName",
+             (std::string(Detector::*)(defs::dacIndex)) & Detector::getDacName,
+             py::arg())
         .def("setPattern",
              (void (Detector::*)(const std::string &, sls::Positions)) &
                  Detector::setPattern,
@@ -1518,9 +1544,10 @@ void init_det(py::module &m) {
                  Detector::setAdditionalJsonParameter,
              py::arg(), py::arg(), py::arg() = Positions{})
         .def("programFPGA",
-             (void (Detector::*)(const std::string &, sls::Positions)) &
+             (void (Detector::*)(const std::string &, const bool,
+                                 sls::Positions)) &
                  Detector::programFPGA,
-             py::arg(), py::arg() = Positions{})
+             py::arg(), py::arg(), py::arg() = Positions{})
         .def("resetFPGA",
              (void (Detector::*)(sls::Positions)) & Detector::resetFPGA,
              py::arg() = Positions{})
@@ -1555,7 +1582,7 @@ void init_det(py::module &m) {
                  Detector::getUpdateMode,
              py::arg() = Positions{})
         .def("setUpdateMode",
-             (void (Detector::*)(bool, sls::Positions)) &
+             (void (Detector::*)(const bool, sls::Positions)) &
                  Detector::setUpdateMode,
              py::arg(), py::arg() = Positions{})
         .def("readRegister",
@@ -1647,9 +1674,5 @@ void init_det(py::module &m) {
                  Detector::getMeasurementTime,
              py::arg() = Positions{})
         .def("getUserDetails",
-             (std::string(Detector::*)() const) & Detector::getUserDetails)
-        .def("getRxCurrentFrameIndex",
-             (Result<uint64_t>(Detector::*)(sls::Positions) const) &
-                 Detector::getRxCurrentFrameIndex,
-             py::arg() = Positions{});
+             (std::string(Detector::*)() const) & Detector::getUserDetails);
 }

slsDetectorCalibration/singlePhotonDetector.h

@@ -429,23 +429,28 @@ class singlePhotonDetector : public analogDetector<uint16_t> {
                     for (ic = -(clusterSize / 2); ic < (clusterSize / 2) + 1;
                          ic++) {
 
-                        if ((iy + ir) >= iy && (iy + ir) < ny &&
-                            (ix + ic) >= ix && (ix + ic) < nx) {
+                        if ((iy + ir) >= 0 && (iy + ir) < ny &&
+                            (ix + ic) >= 0 && (ix + ic) < nx) {
+
+
+                        if ((iy + ir) >= iy && (ix + ic) >= ix ) {
                             val[(iy + ir) * nx + ix + ic] =
                                 subtractPedestal(data, ix + ic, iy + ir, cm);
-                            v = &(val[(iy + ir) * nx + ix + ic]);
-                            tot += *v;
-                            if (ir <= 0 && ic <= 0)
-                                bl += *v;
-                            if (ir <= 0 && ic >= 0)
-                                br += *v;
-                            if (ir >= 0 && ic <= 0)
-                                tl += *v;
-                            if (ir >= 0 && ic >= 0)
-                                tr += *v;
-                            if (*v > max) {
-                                max = *v;
-                            }
+
+			}
+			v = &(val[(iy + ir) * nx + ix + ic]);
+			tot += *v;
+			if (ir <= 0 && ic <= 0)
+			  bl += *v;
+			if (ir <= 0 && ic >= 0)
+			  br += *v;
+			if (ir >= 0 && ic <= 0)
+			  tl += *v;
+			if (ir >= 0 && ic >= 0)
+			  tr += *v;
+			if (*v > max) //{
+			  max = *v;
+			//}
                         }
                     }
                 }
@@ -513,12 +518,19 @@ class singlePhotonDetector : public analogDetector<uint16_t> {
                         for (ic = -(clusterSize / 2);
                              ic < (clusterSize / 2) + 1; ic++) {
                             if ((iy + ir) >= 0 && (iy + ir) < ny &&
-                                (ix + ic) >= 0 && (ix + ic) < nx)
-                                (clusters + nph)
+                                (ix + ic) >= 0 && (ix + ic) < nx) {
+			      (clusters + nph)
                                     ->set_data(val[(iy + ir) * nx + ix + ic],
                                                ic, ir);
+			      if (val[(iy + ir) * nx + ix + ic]>max) 
+				good=0;
+			    }
                         }
                     }
+		    if (good==0) {
+		      (clusters + nph)->print();
+		      cout << max << " " <<  val[iy * nx + ix] << endl;
+		    }
                     good = 1;
                     if (eMin > 0 && tot < eMin)
                         good = 0;

slsDetectorCalibration/single_photon_hit.h

@@ -216,14 +216,18 @@ class single_photon_hit {
 
         // int ix, iy;
 
+      printf("***************\n");
+      printf("** %d %d **\n",x,y);
         for (int iy = 0; iy < dy; iy++) {
             for (int ix = 0; ix < dx; ix++) {
                 printf("%d \t", data[ix + iy * dx]);
             }
             printf("\n");
         }
+      printf("***************\n");
     }
 
+
     /**
         assign the value to the element of the cluster matrix, with relative
        coordinates where the center of the cluster is (0,0) \param v value to be

slsDetectorGui/forms/form_tab_settings.ui

@@ -97,6 +97,11 @@
        <string>65535</string>
       </property>
      </item>
+     <item>
+      <property name="text">
+       <string>4095</string>
+      </property>
+     </item>
      <item>
       <property name="text">
        <string>255</string>

slsDetectorGui/include/qDrawPlot.h

@@ -91,8 +91,10 @@ class qDrawPlot : public QWidget, private Ui::PlotObject {
     void Update2dPlot();
     void Update1dXYRange();
     void Update2dXYRange();
+    void rearrangeGotthard25data(double *data);
 
     static const int NUM_PEDESTAL_FRAMES = 20;
+    static const int NUM_GOTTHARD25_CHANS = 1280;
     sls::Detector *det;
     slsDetectorDefs::detectorType detType;
 
@@ -164,4 +166,5 @@ class qDrawPlot : public QWidget, private Ui::PlotObject {
     uint32_t pixelMask{0};
     uint32_t gainMask{0};
     int gainOffset{0};
+    bool gotthard25;
 };

slsDetectorGui/include/qTabSettings.h

@@ -69,5 +69,11 @@ class qTabSettings : public QWidget, private Ui::TabSettingsObject {
     enum { DYNAMIC, FORCE_SWITCH_G1, FORCE_SWITCH_G2, FIX_G1, FIX_G2, FIX_G0 };
     bool isVisibleFixG0{false};
 
-    enum { DYNAMICRANGE_32, DYNAMICRANGE_16, DYNAMICRANGE_8, DYNAMICRANGE_4 };
+    enum {
+        DYNAMICRANGE_32,
+        DYNAMICRANGE_16,
+        DYNAMICRANGE_12,
+        DYNAMICRANGE_8,
+        DYNAMICRANGE_4
+    };
 };

slsDetectorGui/src/qDrawPlot.cpp

@@ -80,6 +80,10 @@ void qDrawPlot::SetupWidgetWindow() {
         fileSaveName = "Image";
     }
 
+    gotthard25 = ((detType == slsDetectorDefs::GOTTHARD2 ||
+                   detType == slsDetectorDefs::GOTTHARD) &&
+                  det->size() == 2);
+
     SetupPlots();
     SetDataCallBack(true);
     det->registerAcquisitionFinishedCallback(&(GetAcquisitionFinishedCallBack),
@@ -807,6 +811,11 @@ void qDrawPlot::GetData(detectorData *data, uint64_t frameIndex,
         isGainDataExtracted = false;
     }
 
+    // gotthard25um rearranging
+    if (gotthard25) {
+        rearrangeGotthard25data(rawData);
+    }
+
     // title and frame index titles
     plotTitle =
         plotTitlePrefix + QString(data->fileName.c_str()).section('/', -1);
@@ -1064,6 +1073,8 @@ void qDrawPlot::toDoublePixelData(double *dest, char *source, int size,
     // mythen3 / gotthard2 debugging
     int discardBits = numDiscardBits;
 
+    uint16_t temp = 0;
+    uint8_t *src = (uint8_t *)source;
     switch (dr) {
 
     case 4:
@@ -1083,6 +1094,19 @@ void qDrawPlot::toDoublePixelData(double *dest, char *source, int size,
         }
         break;
 
+    case 12:
+        for (ichan = 0; ichan < size; ++ichan) {
+            temp = (*src++ & 0xFF);
+            temp |= ((*src & 0xF) << 8u);
+            dest[ichan] = (double)temp;
+            ++ichan;
+
+            temp = ((*src++ & 0xF0) >> 4u);
+            temp |= ((*src++ & 0xFF) << 4u);
+            dest[ichan] = (double)temp;
+        }
+        break;
+
     case 16:
         if (detType == slsDetectorDefs::JUNGFRAU ||
             detType == slsDetectorDefs::GOTTHARD2) {
@@ -1130,6 +1154,18 @@ void qDrawPlot::toDoublePixelData(double *dest, char *source, int size,
     }
 }
 
+void qDrawPlot::rearrangeGotthard25data(double *data) {
+    const int nChans = NUM_GOTTHARD25_CHANS;
+    double temp[nChans * 2] = {0.0};
+    for (int i = 0; i != nChans; ++i) {
+        // master module
+        temp[i * 2] = data[i];
+        // slave module
+        temp[i * 2 + 1] = data[nChans + i];
+    }
+    memcpy(data, temp, nChans * 2 * sizeof(double));
+}
+
 void qDrawPlot::UpdatePlot() {
     std::lock_guard<std::mutex> lock(mPlots);
     LOG(logDEBUG) << "Update Plot";

slsDetectorGui/src/qTabSettings.cpp

@@ -60,13 +60,19 @@ void qTabSettings::SetupWidgetWindow() {
         QStandardItemModel *model =
             qobject_cast<QStandardItemModel *>(comboDynamicRange->model());
         if (model) {
-            QModelIndex index;
             QStandardItem *item;
-            index =
-                model->index(DYNAMICRANGE_4, comboDynamicRange->modelColumn(),
-                             comboDynamicRange->rootModelIndex());
-            item = model->itemFromIndex(index);
-            item->setEnabled(false);
+            int dr = DYNAMICRANGE_4;
+            for (int i = 0; i != 2; ++i) {
+                // disable dr 4
+                QModelIndex index =
+                    model->index(dr, comboDynamicRange->modelColumn(),
+                                 comboDynamicRange->rootModelIndex());
+                item = model->itemFromIndex(index);
+                item->setEnabled(false);
+
+                // disable dr 12
+                dr = DYNAMICRANGE_12;
+            }
         }
     } else if (detType == slsDetectorDefs::EIGER) {
         lblDynamicRange->setEnabled(true);
@@ -305,6 +311,9 @@ void qTabSettings::GetDynamicRange() {
         case 16:
             comboDynamicRange->setCurrentIndex(DYNAMICRANGE_16);
             break;
+        case 12:
+            comboDynamicRange->setCurrentIndex(DYNAMICRANGE_12);
+            break;
         case 8:
             comboDynamicRange->setCurrentIndex(DYNAMICRANGE_8);
             break;
@@ -333,6 +342,9 @@ void qTabSettings::SetDynamicRange(int index) {
         case DYNAMICRANGE_16:
             det->setDynamicRange(16);
             break;
+        case DYNAMICRANGE_12:
+            det->setDynamicRange(12);
+            break;
         case DYNAMICRANGE_8:
             det->setDynamicRange(8);
             break;

slsDetectorServers/ctbDetectorServer/slsDetectorFunctionList.c

@@ -433,16 +433,21 @@ void initControlServer() {
 }
 
 void initStopServer() {
-
-    usleep(CTRL_SRVR_INIT_TIME_US);
-    if (mapCSP0() == FAIL) {
-        LOG(logERROR,
-            ("Stop Server: Map Fail. Dangerous to continue. Goodbye!\n"));
-        exit(EXIT_FAILURE);
-    }
+    if (!updateFlag && initError == OK) {
+        usleep(CTRL_SRVR_INIT_TIME_US);
+        if (mapCSP0() == FAIL) {
+            initError = FAIL;
+            strcpy(initErrorMessage,
+                   "Stop Server: Map Fail. Dangerous to continue. Goodbye!\n");
+            LOG(logERROR, (initErrorMessage));
+            initCheckDone = 1;
+            return;
+        }
 #ifdef VIRTUAL
-    sharedMemory_setStop(0);
+        sharedMemory_setStop(0);
 #endif
+    }
+    initCheckDone = 1;
 }
 
 /* set up detector */
@@ -702,8 +707,16 @@ void resetPeripheral() {
 }
 
 /* set parameters -  dr, adcenablemask */
+int setDynamicRange(int dr) {
+    if (dr == 16)
+        return OK;
+    return FAIL;
+}
 
-int setDynamicRange(int dr) { return DYNAMIC_RANGE; }
+int getDynamicRange(int *retval) {
+    *retval = DYNAMIC_RANGE;
+    return OK;
+}
 
 int setADCEnableMask(uint32_t mask) {
     if (mask == 0u) {

slsDetectorServers/eigerDetectorServer/Beb.c

@@ -177,7 +177,7 @@ void Beb_AdjustIPChecksum(struct udp_header_type *ip) {
     ip->ip_header_checksum[1] = ip_checksum & 0xff;
 }
 
-void Beb_GetModuleConfiguration(int *master, int *top, int *normal) {
+int Beb_GetModuleConfiguration(int *master, int *top, int *normal) {
     *top = 0;
     *master = 0;
     // mapping new memory to read master top module configuration
@@ -187,6 +187,7 @@ void Beb_GetModuleConfiguration(int *master, int *top, int *normal) {
     int fd = Beb_open(&csp0base, XPAR_PLB_GPIO_SYS_BASEADDR);
     if (fd < 0) {
         LOG(logERROR, ("Module Configuration FAIL\n"));
+        return FAIL;
     } else {
         // read data
         ret = Beb_Read32(csp0base, BEB_CONFIG_RD_OFST);
@@ -202,6 +203,7 @@ void Beb_GetModuleConfiguration(int *master, int *top, int *normal) {
         // close file pointer
         Beb_close(fd, csp0base);
     }
+    return OK;
 }
 
 int Beb_IsTransmitting(int *retval, int tengiga, int waitForDelay) {
@@ -862,11 +864,17 @@ void Beb_ResetFrameNumber() {
 }
 
 int Beb_SetUpTransferParameters(short the_bit_mode) {
-    if (the_bit_mode != 4 && the_bit_mode != 8 && the_bit_mode != 16 &&
-        the_bit_mode != 32)
+    switch (the_bit_mode) {
+    case 4:
+    case 8:
+    case 12:
+    case 16:
+    case 32:
+        Beb_bit_mode = the_bit_mode;
+        return 1;
+    default:
         return 0;
-    Beb_bit_mode = the_bit_mode;
-    return 1;
+    }
 }
 
 int Beb_StopAcquisition() {
@@ -1251,20 +1259,20 @@ int Beb_GetNextFrameNumber(uint64_t *retval, int tengigaEnable) {
 
     else {
         uint64_t left10g =
-            Beb_Read32(csp0base, UDP_HEADER_GET_FNUM_1G_LEFT_MSB_OFST);
-        temp = Beb_Read32(csp0base, UDP_HEADER_GET_FNUM_1G_LEFT_LSB_OFST);
+            Beb_Read32(csp0base, UDP_HEADER_GET_FNUM_10G_LEFT_MSB_OFST);
+        temp = Beb_Read32(csp0base, UDP_HEADER_GET_FNUM_10G_LEFT_LSB_OFST);
         left10g = ((left10g << 32) | temp) >> 16;
         ++left10g; // increment for firmware
 
         uint64_t right10g =
-            Beb_Read32(csp0base, UDP_HEADER_GET_FNUM_1G_LEFT_MSB_OFST);
-        temp = Beb_Read32(csp0base, UDP_HEADER_GET_FNUM_1G_LEFT_LSB_OFST);
+            Beb_Read32(csp0base, UDP_HEADER_GET_FNUM_10G_LEFT_MSB_OFST);
+        temp = Beb_Read32(csp0base, UDP_HEADER_GET_FNUM_10G_LEFT_LSB_OFST);
         right10g = ((right10g << 32) | temp) >> 16;
         Beb_close(fd, csp0base);
         ++right10g; // increment for firmware
 
         if (left10g != right10g) {
-            LOG(logERROR, ("Retrieved inconsistent frame numbers from `0g left "
+            LOG(logERROR, ("Retrieved inconsistent frame numbers from 10g left "
                            "%llu and right %llu\n",
                            (long long int)left10g, (long long int)right10g));
             *retval = (left10g > right10g)

slsDetectorServers/eigerDetectorServer/Beb.h

@@ -15,7 +15,7 @@ int Beb_SetHeaderData(uint64_t src_mac, uint32_t src_ip, uint16_t src_port,
                       uint64_t dst_mac, uint32_t dst_ip, uint16_t dst_port);
 void Beb_AdjustIPChecksum(struct udp_header_type *ip);
 
-void Beb_GetModuleConfiguration(int *master, int *top, int *normal);
+int Beb_GetModuleConfiguration(int *master, int *top, int *normal);
 int Beb_IsTransmitting(int *retval, int tengiga, int waitForDelay);
 
 void Beb_SetTopVariable(int val);

slsDetectorServers/eigerDetectorServer/CMakeLists.txt

@@ -16,91 +16,31 @@ include_directories(
     ../../slsSupportLib/include
 )
 
-add_executable(eigerDetectorServerMaster_virtual 
+add_executable(eigerDetectorServer_virtual 
     ${src}
 )
 
-target_include_directories(eigerDetectorServerMaster_virtual
+target_include_directories(eigerDetectorServer_virtual
     PUBLIC ${CMAKE_CURRENT_SOURCE_DIR}
 )
 
-target_compile_definitions(eigerDetectorServerMaster_virtual
-    PUBLIC EIGERD PCCOMPILE STOP_SERVER
-    PUBLIC VIRTUAL #VIRTUAL_9M
-    PUBLIC VIRTUAL_MASTER
-)
-
-target_link_libraries(eigerDetectorServerMaster_virtual
-    PUBLIC pthread rt slsProjectCSettings
-)
-
-set_target_properties(eigerDetectorServerMaster_virtual PROPERTIES
-    RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
-)
-
-install(TARGETS eigerDetectorServerMaster_virtual 
-    RUNTIME  DESTINATION ${CMAKE_INSTALL_BINDIR}
-)
-
-
-
-
-
-add_executable(eigerDetectorServerSlaveTop_virtual 
-    ${src}
-)
-
-target_include_directories(eigerDetectorServerSlaveTop_virtual
-    PUBLIC ${CMAKE_CURRENT_SOURCE_DIR}
-)
-
-target_compile_definitions(eigerDetectorServerSlaveTop_virtual
-    PUBLIC EIGERD PCCOMPILE STOP_SERVER
-    PUBLIC VIRTUAL #VIRTUAL_9M
-    PUBLIC VIRTUAL_TOP
-)
-
-target_link_libraries(eigerDetectorServerSlaveTop_virtual
-    PUBLIC pthread rt slsProjectCSettings
-)
-
-set_target_properties(eigerDetectorServerSlaveTop_virtual PROPERTIES
-    RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
-)
-
-install(TARGETS eigerDetectorServerSlaveTop_virtual
-    RUNTIME  DESTINATION ${CMAKE_INSTALL_BINDIR}
-)
-
-
-
-
-add_executable(eigerDetectorServerSlaveBottom_virtual 
-    ${src}
-)
-
-target_include_directories(eigerDetectorServerSlaveBottom_virtual
-    PUBLIC ${CMAKE_CURRENT_SOURCE_DIR}
-)
-
-target_compile_definitions(eigerDetectorServerSlaveBottom_virtual
+target_compile_definitions(eigerDetectorServer_virtual
     PUBLIC EIGERD PCCOMPILE STOP_SERVER
     PUBLIC VIRTUAL #VIRTUAL_9M
 )
 
-target_link_libraries(eigerDetectorServerSlaveBottom_virtual
+target_link_libraries(eigerDetectorServer_virtual
     PUBLIC pthread rt slsProjectCSettings
 )
 
-set_target_properties(eigerDetectorServerSlaveBottom_virtual PROPERTIES
+set_target_properties(eigerDetectorServer_virtual PROPERTIES
     RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin
 )
 
-install(TARGETS eigerDetectorServerSlaveBottom_virtual
+install(TARGETS eigerDetectorServer_virtual 
     RUNTIME  DESTINATION ${CMAKE_INSTALL_BINDIR}
 )
 
 
-
 configure_file(config_eiger.txt ${CMAKE_BINARY_DIR}/bin/config_eiger.txt COPYONLY)
 configure_file(detid_eiger.txt ${CMAKE_BINARY_DIR}/bin/detid_eiger.txt COPYONLY)

slsDetectorServers/eigerDetectorServer/FebControl.c

@@ -18,7 +18,7 @@
 const unsigned int Feb_Control_leftAddress = 0x100;
 const unsigned int Feb_Control_rightAddress = 0x200;
 
-int Feb_Control_master = 0;
+int Feb_Control_master = -1;
 int Feb_Control_normal = 0;
 int Feb_Control_activated = 1;
 
@@ -50,17 +50,16 @@ double ratemax = -1;
 // setup
 void Feb_Control_activate(int activate) { Feb_Control_activated = activate; }
 
-void Feb_Control_FebControl() {
-    Feb_Control_staticBits = Feb_Control_acquireNReadoutMode =
-        Feb_Control_triggerMode = Feb_Control_externalEnableMode =
-            Feb_Control_subFrameMode = 0;
+int Feb_Control_FebControl(int normal) {
+    Feb_Control_staticBits = 0;
+    Feb_Control_acquireNReadoutMode = 0;
+    Feb_Control_triggerMode = 0;
+    Feb_Control_externalEnableMode = 0;
+    Feb_Control_subFrameMode = 0;
     Feb_Control_trimbit_size = 263680;
     Feb_Control_last_downloaded_trimbits =
         malloc(Feb_Control_trimbit_size * sizeof(int));
-}
 
-int Feb_Control_Init(int master, int normal) {
-    Feb_Control_master = master;
     Feb_Control_normal = normal;
     Feb_Interface_SetAddress(Feb_Control_rightAddress, Feb_Control_leftAddress);
     if (Feb_Control_activated) {
@@ -931,7 +930,10 @@ unsigned int Feb_Control_ConvertTimeToRegister(float time_in_sec) {
 
 int Feb_Control_PrepareForAcquisition() {
     LOG(logINFOBLUE, ("Preparing for Acquisition\n"));
-    Feb_Control_PrintAcquisitionSetup();
+    if (!Feb_Control_PrintAcquisitionSetup()) {
+        LOG(logERROR, ("Could not prepare acquisition\n"));
+        return 0;
+    }
 
     if (Feb_Control_Reset() == STATUS_ERROR) {
         LOG(logERROR, ("Trouble reseting daq or data stream\n"));
@@ -988,20 +990,26 @@ int Feb_Control_PrepareForAcquisition() {
     return 1;
 }
 
-void Feb_Control_PrintAcquisitionSetup() {
+int Feb_Control_PrintAcquisitionSetup() {
     time_t rawtime;
     time(&rawtime);
     struct tm *timeinfo = localtime(&rawtime);
-    LOG(logINFO,
-        ("Starting an exposure: (%s)"
-         "\t Dynamic range nbits: %d\n"
-         "\t Trigger mode: 0x%x\n"
-         "\t Number of exposures: %d\n"
-         "\t Exsposure time (if used): %f seconds.\n"
-         "\t Exsposure period (if used): %f seconds.\n\n",
-         asctime(timeinfo), Feb_Control_GetDynamicRange(),
-         Feb_Control_triggerMode, Feb_Control_GetNExposures(),
-         Feb_Control_exposure_time_in_sec, Feb_Control_exposure_period_in_sec));
+    int dr = 0;
+    if (!Feb_Control_GetDynamicRange(&dr)) {
+        LOG(logERROR, ("Could not print acquisition set up\n"));
+        return 0;
+    }
+    LOG(logINFO, ("Starting an exposure: (%s)"
+                  "\t Dynamic range nbits: %d\n"
+                  "\t Trigger mode: 0x%x\n"
+                  "\t Number of exposures: %d\n"
+                  "\t Exsposure time (if used): %f seconds.\n"
+                  "\t Exsposure period (if used): %f seconds.\n\n",
+                  asctime(timeinfo), dr, Feb_Control_triggerMode,
+                  Feb_Control_GetNExposures(), Feb_Control_exposure_time_in_sec,
+                  Feb_Control_exposure_period_in_sec));
+
+    return 1;
 }
 
 int Feb_Control_StartAcquisition() {
@@ -1169,49 +1177,106 @@ int Feb_Control_SoftwareTrigger(int block) {
 }
 
 // parameters
-int Feb_Control_SetDynamicRange(unsigned int four_eight_sixteen_or_thirtytwo) {
+int Feb_Control_SetDynamicRange(int dr) {
     static unsigned int everything_but_bit_mode = DAQ_STATIC_BIT_PROGRAM |
                                                   DAQ_STATIC_BIT_CHIP_TEST |
                                                   DAQ_STATIC_BIT_ROTEST;
-    if (four_eight_sixteen_or_thirtytwo == 4) {
+    switch (dr) {
+    case 4:
         Feb_Control_staticBits =
             DAQ_STATIC_BIT_M4 |
             (Feb_Control_staticBits &
              everything_but_bit_mode); // leave test bits in currernt state
         Feb_Control_subFrameMode &= ~DAQ_NEXPOSURERS_ACTIVATE_AUTO_SUBIMAGING;
-    } else if (four_eight_sixteen_or_thirtytwo == 8) {
+        break;
+    case 8:
         Feb_Control_staticBits = DAQ_STATIC_BIT_M8 | (Feb_Control_staticBits &
                                                       everything_but_bit_mode);
         Feb_Control_subFrameMode &= ~DAQ_NEXPOSURERS_ACTIVATE_AUTO_SUBIMAGING;
-    } else if (four_eight_sixteen_or_thirtytwo == 16) {
+        break;
+    case 12:
+    case 16:
         Feb_Control_staticBits = DAQ_STATIC_BIT_M12 | (Feb_Control_staticBits &
                                                        everything_but_bit_mode);
         Feb_Control_subFrameMode &= ~DAQ_NEXPOSURERS_ACTIVATE_AUTO_SUBIMAGING;
-    } else if (four_eight_sixteen_or_thirtytwo == 32) {
+
+        // disable 16 bit conversion if 12 bit mode  (enable if 16 bit)
+        if (!Feb_Control_Disable16bitConversion(dr == 12))
+            return 0;
+        break;
+    case 32:
         Feb_Control_staticBits = DAQ_STATIC_BIT_M12 | (Feb_Control_staticBits &
                                                        everything_but_bit_mode);
         Feb_Control_subFrameMode |= DAQ_NEXPOSURERS_ACTIVATE_AUTO_SUBIMAGING;
-    } else {
-        LOG(logERROR, ("dynamic range (%d) not valid, not setting bit mode.\n",
-                       four_eight_sixteen_or_thirtytwo));
+        break;
+    default:
+        LOG(logERROR,
+            ("dynamic range (%d) not valid, not setting bit mode.\n", dr));
         LOG(logINFO, ("Set dynamic range int must equal 4,8 16, or 32.\n"));
         return 0;
     }
 
-    LOG(logINFO,
-        ("Dynamic range set to %d\n", four_eight_sixteen_or_thirtytwo));
+    LOG(logINFO, ("Dynamic range set to %d\n", dr));
     return 1;
 }
 
-unsigned int Feb_Control_GetDynamicRange() {
-    if (Feb_Control_subFrameMode & DAQ_NEXPOSURERS_ACTIVATE_AUTO_SUBIMAGING)
-        return 32;
-    else if (DAQ_STATIC_BIT_M4 & Feb_Control_staticBits)
-        return 4;
-    else if (DAQ_STATIC_BIT_M8 & Feb_Control_staticBits)
-        return 8;
+int Feb_Control_GetDynamicRange(int *retval) {
+    if (Feb_Control_subFrameMode & DAQ_NEXPOSURERS_ACTIVATE_AUTO_SUBIMAGING) {
+        *retval = 32;
+    } else if (DAQ_STATIC_BIT_M4 & Feb_Control_staticBits) {
+        *retval = 4;
+    } else if (DAQ_STATIC_BIT_M8 & Feb_Control_staticBits) {
+        *retval = 8;
+    } else {
+        int disable16 = 0;
+        if (!Feb_Control_Get16bitConversionDisabled(&disable16)) {
+            LOG(logERROR, ("Could not get dynamic range (12 or 16 bit)\n"));
+            return 0;
+        }
+        if (disable16) {
+            *retval = 12;
+        } else {
+            *retval = 16;
+        }
+    }
 
-    return 16;
+    return 1;
+}
+
+int Feb_Control_Disable16bitConversion(int disable) {
+    LOG(logINFO, ("%s 16 bit expansion\n", disable ? "Disabling" : "Enabling"));
+    unsigned int regval = 0;
+    if (!Feb_Control_ReadRegister(DAQ_REG_HRDWRE, &regval)) {
+        LOG(logERROR, ("Could not %s 16 bit expansion (bit mode)\n",
+                       (disable ? "disable" : "enable")));
+        return 0;
+    }
+    if (disable) {
+        regval |= DAQ_REG_HRDWRE_DSBL_16BIT_MSK;
+    } else {
+        regval &= ~DAQ_REG_HRDWRE_DSBL_16BIT_MSK;
+    }
+
+    if (!Feb_Control_WriteRegister(DAQ_REG_HRDWRE, regval)) {
+        LOG(logERROR, ("Could not %s 16 bit expansion (bit mode)\n",
+                       (disable ? "disable" : "enable")));
+        return 0;
+    }
+    return 1;
+}
+
+int Feb_Control_Get16bitConversionDisabled(int *ret) {
+    unsigned int regval = 0;
+    if (!Feb_Control_ReadRegister(DAQ_REG_HRDWRE, &regval)) {
+        LOG(logERROR, ("Could not get 16 bit expansion (bit mode)\n"));
+        return 0;
+    }
+    if (regval & DAQ_REG_HRDWRE_DSBL_16BIT_MSK) {
+        *ret = 1;
+    } else {
+        *ret = 0;
+    }
+    return 1;
 }
 
 int Feb_Control_SetReadoutSpeed(unsigned int readout_speed) {
@@ -1490,9 +1555,8 @@ int Feb_Control_SetTop(enum TOPINDEX ind, int left, int right) {
     return 1;
 }
 
-void Feb_Control_SetMasterVariable(int val) { Feb_Control_master = val; }
-
 int Feb_Control_SetMaster(enum MASTERINDEX ind) {
+
     uint32_t offset = DAQ_REG_HRDWRE;
     unsigned int addr[2] = {Feb_Control_leftAddress, Feb_Control_rightAddress};
     char *master_names[] = {MASTER_NAMES};
@@ -1529,9 +1593,31 @@ int Feb_Control_SetMaster(enum MASTERINDEX ind) {
     LOG(logINFOBLUE, ("%s Master flag to %s Feb\n",
                       (ind == MASTER_HARDWARE ? "Resetting" : "Overwriting"),
                       master_names[ind]));
+
     return 1;
 }
 
+int Feb_Control_SetMasterEffects(int master, int controlServer) {
+    int prevMaster = Feb_Control_master;
+
+    Feb_Control_master = master;
+    // change in master for 9m
+    if (controlServer && prevMaster != Feb_Control_master &&
+        !Feb_Control_normal) {
+        if (prevMaster) {
+            Feb_Control_CloseSerialCommunication();
+        }
+        if (Feb_Control_master) {
+            if (!Feb_Control_OpenSerialCommunication()) {
+                LOG(logERROR, ("Could not intitalize feb control serial "
+                               "communication\n"));
+                return FAIL;
+            }
+        }
+    }
+    return OK;
+}
+
 int Feb_Control_SetQuad(int val) {
     LOG(logINFO, ("Setting Quad to %d in Feb\n", val));
     Feb_Control_quadMode = val;
@@ -1554,7 +1640,10 @@ int Feb_Control_SetChipSignalsToTrimQuad(int enable) {
             regval &= ~(DAQ_REG_HRDWRE_PROGRAM_MSK | DAQ_REG_HRDWRE_M8_MSK);
         }
 
-        return Feb_Control_WriteRegister(DAQ_REG_HRDWRE, regval);
+        if (!Feb_Control_WriteRegister(DAQ_REG_HRDWRE, regval)) {
+            LOG(logERROR, ("Could not set chip signals to trim quad\n"));
+            return 0;
+        }
     }
     return 1;
 }
@@ -1604,7 +1693,7 @@ int Feb_Control_WriteRegister(uint32_t offset, uint32_t data) {
 
     for (int iloop = 0; iloop < 2; ++iloop) {
         if (run[iloop]) {
-            LOG(logINFO,
+            LOG(logDEBUG1,
                 ("Writing 0x%x to %s 0x%x\n", data, side[iloop], actualOffset));
             if (!Feb_Interface_WriteRegister(addr[iloop], actualOffset, data, 0,
                                              0)) {
@@ -1612,6 +1701,18 @@ int Feb_Control_WriteRegister(uint32_t offset, uint32_t data) {
                                side[iloop], actualOffset));
                 return 0;
             }
+            uint32_t regVal = 0;
+            if (!Feb_Interface_ReadRegister(addr[iloop], actualOffset,
+                                            &regVal)) {
+                LOG(logERROR, ("Could not read %s register\n", addr[iloop]));
+                return 0;
+            }
+            if (regVal != data) {
+                LOG(logERROR,
+                    ("Could not write %s register. Write 0x%x, read 0x%x\n",
+                     addr[iloop], data, regVal));
+                return 0;
+            }
         }
     }
 
@@ -1648,8 +1749,8 @@ int Feb_Control_ReadRegister(uint32_t offset, uint32_t *retval) {
                                side[iloop], actualOffset));
                 return 0;
             }
-            LOG(logINFO, ("Read 0x%x from %s 0x%x\n", value[iloop], side[iloop],
-                          actualOffset));
+            LOG(logDEBUG1, ("Read 0x%x from %s 0x%x\n", value[iloop],
+                            side[iloop], actualOffset));
             *retval = value[iloop];
             // if not the other (left, not right OR right, not left), return the
             // value
@@ -1824,7 +1925,11 @@ int64_t Feb_Control_Get_RateTable_Period_in_nsec() {
 
 int Feb_Control_SetRateCorrectionTau(int64_t tau_in_Nsec) {
     // period = exptime if 16bit, period = subexptime if 32 bit
-    int dr = Feb_Control_GetDynamicRange();
+    int dr = 0;
+    if (!Feb_Control_GetDynamicRange(&dr)) {
+        LOG(logERROR, ("Could not set rate correction tau\n"));
+        return 0;
+    }
     double period_in_sec =
         (double)(Feb_Control_GetSubFrameExposureTime()) / (double)1e9;
     if (dr == 16)

slsDetectorServers/eigerDetectorServer/FebControl.h

@@ -7,8 +7,7 @@
 
 // setup
 void Feb_Control_activate(int activate);
-void Feb_Control_FebControl();
-int Feb_Control_Init(int master, int normal);
+int Feb_Control_FebControl(int normal);
 int Feb_Control_OpenSerialCommunication();
 void Feb_Control_CloseSerialCommunication();
 int Feb_Control_CheckSetup();
@@ -55,7 +54,7 @@ int Feb_Control_ResetChipPartially();
 int Feb_Control_SendBitModeToBebServer();
 unsigned int Feb_Control_ConvertTimeToRegister(float time_in_sec);
 int Feb_Control_PrepareForAcquisition();
-void Feb_Control_PrintAcquisitionSetup();
+int Feb_Control_PrintAcquisitionSetup();
 int Feb_Control_StartAcquisition();
 int Feb_Control_StopAcquisition();
 int Feb_Control_IsReadyForTrigger(int *readyForTrigger);
@@ -63,8 +62,10 @@ int Feb_Control_SendSoftwareTrigger();
 int Feb_Control_SoftwareTrigger(int block);
 
 // parameters
-int Feb_Control_SetDynamicRange(unsigned int four_eight_sixteen_or_thirtytwo);
-unsigned int Feb_Control_GetDynamicRange();
+int Feb_Control_SetDynamicRange(int dr);
+int Feb_Control_GetDynamicRange(int *retval);
+int Feb_Control_Disable16bitConversion(int disable);
+int Feb_Control_Get16bitConversionDisabled();
 int Feb_Control_SetReadoutSpeed(unsigned int readout_speed);
 int Feb_Control_SetReadoutMode(unsigned int readout_mode);
 int Feb_Control_SetTriggerMode(unsigned int trigger_mode);
@@ -86,8 +87,8 @@ int Feb_Control_Get_Counter_Bit();
 int Feb_Control_SetInterruptSubframe(int val);
 int Feb_Control_GetInterruptSubframe();
 int Feb_Control_SetTop(enum TOPINDEX ind, int left, int right);
-void Feb_Control_SetMasterVariable(int val);
 int Feb_Control_SetMaster(enum MASTERINDEX ind);
+int Feb_Control_SetMasterEffects(int master, int controlServer);
 int Feb_Control_SetQuad(int val);
 int Feb_Control_SetChipSignalsToTrimQuad(int enable);
 int Feb_Control_SetReadNRows(int value);

slsDetectorServers/eigerDetectorServer/FebRegisterDefs.h

@@ -29,6 +29,8 @@
 #define DAQ_REG_HRDWRE_OW_MASTER_MSK   (0x00000001 << DAQ_REG_HRDWRE_OW_MASTER_OFST)
 #define DAQ_REG_HRDWRE_MASTER_OFST     (4)
 #define DAQ_REG_HRDWRE_MASTER_MSK      (0x00000001 << DAQ_REG_HRDWRE_MASTER_OFST)
+#define DAQ_REG_HRDWRE_DSBL_16BIT_OFST (5)
+#define DAQ_REG_HRDWRE_DSBL_16BIT_MSK  (0x00000001 << DAQ_REG_HRDWRE_DSBL_16BIT_OFST)
 #define DAQ_REG_HRDWRE_PROGRAM_OFST    (30)
 #define DAQ_REG_HRDWRE_PROGRAM_MSK     (0x00000001 << DAQ_REG_HRDWRE_PROGRAM_OFST)
 #define DAQ_REG_HRDWRE_M8_OFST         (31)

slsDetectorServers/eigerDetectorServer/slsDetectorFunctionList.c

@@ -26,12 +26,17 @@ extern int updateFlag;
 extern udpStruct udpDetails[MAX_UDP_DESTINATION];
 extern int numUdpDestinations;
 extern const enum detectorType myDetectorType;
+extern int ignoreConfigFileFlag;
 
 // Global variable from communication_funcs.c
 extern int isControlServer;
 extern void getMacAddressinString(char *cmac, int size, uint64_t mac);
 extern void getIpAddressinString(char *cip, uint32_t ip);
 
+// Variables that will be exported
+int masterCommandLine = -1;
+int topCommandLine = -1;
+
 int initError = OK;
 int initCheckDone = 0;
 char initErrorMessage[MAX_STR_LENGTH];
@@ -226,6 +231,23 @@ int getModuleId(int *ret, char *mess) {
     return getModuleIdInFile(ret, mess, ID_FILE);
 }
 
+int updateModuleId() {
+    int modid = getModuleIdInFile(&initError, initErrorMessage, ID_FILE);
+    if (initError == FAIL) {
+        return FAIL;
+    }
+#ifdef VIRTUAL
+    eiger_virtual_module_id = modid;
+#else
+    if (Beb_SetModuleId(modid) == FAIL) {
+        initError = FAIL;
+        strcpy(initErrorMessage, ("Could not get module id from the file"));
+        return FAIL;
+    }
+#endif
+    return OK;
+}
+
 u_int64_t getDetectorMAC() {
     char mac[255] = "";
     u_int64_t res = 0;
@@ -305,46 +327,36 @@ u_int32_t getDetectorIP() {
 void initControlServer() {
     LOG(logINFOBLUE, ("Configuring Control server\n"));
     if (!updateFlag && initError == OK) {
-        int modid = getModuleIdInFile(&initError, initErrorMessage, ID_FILE);
-#ifdef VIRTUAL
-        eiger_virtual_module_id = modid;
-#endif
-        if (initError == FAIL) {
+        if (updateModuleConfiguration() == FAIL) {
+            initCheckDone = 1;
             return;
         }
-        getModuleConfiguration();
 #ifndef VIRTUAL
         sharedMemory_lockLocalLink();
-        Feb_Control_SetMasterVariable(master);
         Feb_Interface_FebInterface();
-        Feb_Control_FebControl();
-        // same addresses for top and bottom
-        if (!Feb_Control_Init(master, normal)) {
+        if (!Feb_Control_FebControl(normal)) {
             initError = FAIL;
-            sprintf(initErrorMessage, "Could not intitalize feb control\n");
+            sprintf(initErrorMessage,
+                    "Could not intitalize eiger detector sever: feb control\n");
             LOG(logERROR, (initErrorMessage));
             initCheckDone = 1;
             sharedMemory_unlockLocalLink();
             return;
         }
-        // master of 9M, check high voltage serial communication to blackfin
-        if (master && !normal) {
-            if (!Feb_Control_OpenSerialCommunication()) {
-                initError = FAIL;
-                sprintf(
-                    initErrorMessage,
-                    "Could not intitalize feb control serial communication\n");
-                LOG(logERROR, (initErrorMessage));
-                initCheckDone = 1;
-                sharedMemory_unlockLocalLink();
-                return;
-            }
+        if (Feb_Control_SetMasterEffects(master, isControlServer) == FAIL) {
+            initError = FAIL;
+            sprintf(initErrorMessage, "Could not intitalize HV for eiger "
+                                      "detector server: feb control serial "
+                                      "communication\n");
+            LOG(logERROR, (initErrorMessage));
+            initCheckDone = 1;
+            sharedMemory_unlockLocalLink();
+            return;
         }
         sharedMemory_unlockLocalLink();
         LOG(logDEBUG1, ("Control server: FEB Initialization done\n"));
         Beb_SetTopVariable(top);
         Beb_Beb();
-        Beb_SetModuleId(modid);
         LOG(logDEBUG1, ("Control server: BEB Initialization done\n"));
 #endif
         // also reads config file and deactivates
@@ -354,73 +366,126 @@ void initControlServer() {
 }
 
 void initStopServer() {
+    if (!updateFlag && initError == OK) {
+        // wait a few s (control server is setting top/master from config file/
+        // command line)
+        usleep(WAIT_STOP_SERVER_START);
+        LOG(logINFOBLUE, ("Configuring Stop server\n"));
+        if (updateModuleConfiguration() == FAIL) {
+            initCheckDone = 1;
+            return;
+        }
 #ifdef VIRTUAL
-    LOG(logINFOBLUE, ("Configuring Stop server\n"));
-    getModuleConfiguration();
-    sharedMemory_setStop(0);
-    // get top/master in virtual
-    readConfigFile();
+        sharedMemory_setStop(0);
+        // force top or master if in config file
+        if (readConfigFile() == FAIL) {
+            initCheckDone = 1;
+            return;
+        }
+        // force top or master if in command line
+        if (checkCommandLineConfiguration() == FAIL) {
+            initCheckDone = 1;
+            return;
+        }
 #else
-    // wait a few s (control server is setting top/master from config file)
-    usleep(WAIT_STOP_SERVER_START);
-    LOG(logINFOBLUE, ("Configuring Stop server\n"));
-    // exit(-1);
-    getModuleConfiguration();
-    sharedMemory_lockLocalLink();
-    Feb_Control_SetMasterVariable(master);
-    Feb_Interface_FebInterface();
-    Feb_Control_FebControl();
-    // same addresses for top and bottom
-    Feb_Control_Init(master, normal);
-    sharedMemory_unlockLocalLink();
-    LOG(logDEBUG1, ("Stop server: FEB Initialization done\n"));
+        // control server read config file and already set up master/top
+        sharedMemory_lockLocalLink();
+        Feb_Interface_FebInterface();
+        if (!Feb_Control_FebControl(normal)) {
+            initError = FAIL;
+            sprintf(initErrorMessage, "Could not intitalize feb control\n");
+            LOG(logERROR, (initErrorMessage));
+            initCheckDone = 1;
+            sharedMemory_unlockLocalLink();
+            return;
+        }
+        if (Feb_Control_SetMasterEffects(master, isControlServer) == FAIL) {
+            initError = FAIL;
+            sprintf(initErrorMessage, "Could not intitalize HV for eiger "
+                                      "detector server: feb control serial "
+                                      "communication\n");
+            LOG(logERROR, (initErrorMessage));
+            initCheckDone = 1;
+            sharedMemory_unlockLocalLink();
+            return;
+        }
+        sharedMemory_unlockLocalLink();
+        LOG(logDEBUG1, ("Stop server: FEB Initialization done\n"));
+        Beb_SetTopVariable(top);
+        Beb_Beb();
+        LOG(logDEBUG1, ("Control server: BEB Initialization done\n"));
 #endif
-    // client first connect (from shm) will activate
-    if (setActivate(0) == FAIL) {
-        LOG(logERROR, ("Could not deactivate in stop server\n"));
+        // client first connect (from shm) will activate
+        if (setActivate(0) == FAIL) {
+            initError = FAIL;
+            strcpy(initErrorMessage, "Could not deactivate\n");
+            LOG(logERROR, (initErrorMessage));
+        }
     }
+    initCheckDone = 1;
 }
 
-void getModuleConfiguration() {
-    if (initError == FAIL) {
-        return;
-    }
+void checkVirtual9MFlag() {
 #ifdef VIRTUAL
-#ifdef VIRTUAL_MASTER
-    master = 1;
-    top = 1;
-#else
-    master = 0;
-#ifdef VIRTUAL_TOP
-    top = 1;
-#else
-    top = 0;
-#endif
-#endif
-
 #ifdef VIRTUAL_9M
     normal = 0;
 #else
     normal = 1;
 #endif
+#endif
+}
 
-#else
-    Beb_GetModuleConfiguration(&master, &top, &normal);
+int updateModuleConfiguration() {
+    if (getModuleConfiguration(&master, &top, &normal) == FAIL) {
+        return FAIL;
+    }
+#ifdef VIRTUAL
+    checkVirtual9MFlag();
 #endif
     if (isControlServer) {
         LOG(logINFOBLUE,
             ("Module: %s %s %s\n", (top ? "TOP" : "BOTTOM"),
              (master ? "MASTER" : "SLAVE"), (normal ? "NORMAL" : "SPECIAL")));
     }
+    return OK;
+}
+
+int getModuleConfiguration(int *m, int *t, int *n) {
+    if (initError == FAIL) {
+        return FAIL;
+    }
+#ifdef VIRTUAL
+    *m = master;
+    *t = top;
+    *n = normal;
+#else
+    if (Beb_GetModuleConfiguration(m, t, n) == FAIL) {
+        initError = FAIL;
+        strcpy(initErrorMessage, ("Could not get module configuration\n"));
+        LOG(logERROR, (initErrorMessage));
+        return FAIL;
+    }
+#endif
+    LOG(logDEBUG,
+        ("module config read: master:%d top:%d normal:%d\n", *m, *t, *n));
+    return OK;
 }
 
 int readConfigFile() {
-
     if (initError == FAIL) {
         return initError;
     }
-    master = -1;
+
+    if (ignoreConfigFileFlag) {
+        LOG(logWARNING, ("Ignoring Config file\n"));
+        return OK;
+    }
+
+#ifndef VIRTUAL
+    // if not found in config file, they will be reset to hardware settings
     top = -1;
+    master = -1;
+#endif
 
     const int fileNameSize = 128;
     char fname[fileNameSize];
@@ -471,91 +536,54 @@ int readConfigFile() {
 
         // top command
         if (!strncmp(line, "top", strlen("top"))) {
+            int t = -1;
             // cannot scan values
-            if (sscanf(line, "%s %d", command, &top) != 2) {
+            if (sscanf(line, "%s %d", command, &t) != 2) {
                 sprintf(initErrorMessage,
                         "Could not scan top commands from on-board server "
                         "config file. Line:[%s].\n",
                         line);
                 break;
             }
-#ifndef VIRTUAL
-            enum TOPINDEX ind = (top == 1 ? OW_TOP : OW_BOTTOM);
-            if (!Beb_SetTop(ind)) {
-                sprintf(
-                    initErrorMessage,
-                    "Could not overwrite top to %d in Beb from on-board server "
-                    "config file. Line:[%s].\n",
-                    top, line);
+            if (t != 0 && t != 1) {
+                sprintf(initErrorMessage,
+                        "Invalid top argument from on-board server "
+                        "config file. Line:[%s].\n",
+                        line);
                 break;
             }
-            sharedMemory_lockLocalLink();
-            if (!Feb_Control_SetTop(ind, 1, 1)) {
-                sprintf(
-                    initErrorMessage,
-                    "Could not overwrite top to %d in Feb from on-board server "
-                    "config file. Line:[%s].\n",
-                    top, line);
-                sharedMemory_unlockLocalLink();
+            if (setTop(t == 1 ? OW_TOP : OW_BOTTOM) == FAIL) {
+                sprintf(initErrorMessage,
+                        "Could not set top from config file. Line:[%s].\n",
+                        line);
                 break;
             }
-            sharedMemory_unlockLocalLink();
-            // validate change
-            int actual_top = -1, temp = -1, temp2 = -1;
-            Beb_GetModuleConfiguration(&temp, &actual_top, &temp2);
-            if (actual_top != top) {
-                sprintf(initErrorMessage, "Could not set top to %d. Read %d\n",
-                        top, actual_top);
-                break;
-            }
-            Beb_SetTopVariable(top);
-#endif
         }
 
         // master command
         else if (!strncmp(line, "master", strlen("master"))) {
+            int m = -1;
             // cannot scan values
-            if (sscanf(line, "%s %d", command, &master) != 2) {
+            if (sscanf(line, "%s %d", command, &m) != 2) {
                 sprintf(initErrorMessage,
                         "Could not scan master commands from on-board server "
                         "config file. Line:[%s].\n",
                         line);
                 break;
             }
-#ifndef VIRTUAL
-            enum MASTERINDEX ind = (master == 1 ? OW_MASTER : OW_SLAVE);
-            if (!Beb_SetMaster(ind)) {
+            if (m != 0 && m != 1) {
                 sprintf(initErrorMessage,
-                        "Could not overwrite master to %d in Beb from on-board "
-                        "server "
+                        "Invalid master argument from on-board server "
                         "config file. Line:[%s].\n",
-                        master, line);
+                        line);
                 break;
             }
-            sharedMemory_lockLocalLink();
-            if (!Feb_Control_SetMaster(ind)) {
+            if (setMaster(m == 1 ? OW_MASTER : OW_SLAVE) == FAIL) {
                 sprintf(initErrorMessage,
-                        "Could not overwrite master to %d in Feb from on-board "
-                        "server "
-                        "config file. Line:[%s].\n",
-                        master, line);
-                sharedMemory_unlockLocalLink();
+                        "Could not set master from config file. Line:[%s].\n",
+                        line);
                 break;
             }
-            sharedMemory_unlockLocalLink();
-            // validate change
-            int actual_master = -1, temp = -1, temp2 = -1;
-            Beb_GetModuleConfiguration(&actual_master, &temp, &temp2);
-            if (actual_master != master) {
-                sprintf(initErrorMessage,
-                        "Could not set master to %d. Read %d\n", master,
-                        actual_master);
-                break;
-            }
-            sharedMemory_lockLocalLink();
-            Feb_Control_SetMasterVariable(master);
-            sharedMemory_unlockLocalLink();
-#endif
         }
 
         // other commands
@@ -576,8 +604,10 @@ int readConfigFile() {
         LOG(logINFO, ("Successfully read config file\n"));
     }
 
+#ifndef VIRTUAL
     // reset to hardware settings if not in config file (if overwritten)
     resetToHardwareSettings();
+#endif
 
     return initError;
 }
@@ -589,55 +619,56 @@ void resetToHardwareSettings() {
     }
     // top not set in config file
     if (top == -1) {
-        if (!Beb_SetTop(TOP_HARDWARE)) {
+        LOG(logINFO, ("Resetting Top to hardware settings\n"));
+        if (setTop(TOP_HARDWARE) == FAIL) {
             initError = FAIL;
             strcpy(initErrorMessage,
-                   "Could not reset Top flag to Beb hardware settings.\n");
+                   "Could not reset Top flag to hardware settings.\n");
             LOG(logERROR, ("%s\n\n", initErrorMessage));
             return;
         }
-        sharedMemory_lockLocalLink();
-        if (!Feb_Control_SetTop(TOP_HARDWARE, 1, 1)) {
-            initError = FAIL;
-            strcpy(initErrorMessage,
-                   "Could not reset Top flag to Feb hardware settings.\n");
-            LOG(logERROR, ("%s\n\n", initErrorMessage));
-            sharedMemory_unlockLocalLink();
-            return;
-        }
-        sharedMemory_unlockLocalLink();
-        int temp = -1, temp2 = -1;
-        Beb_GetModuleConfiguration(&temp, &top, &temp2);
-        Beb_SetTopVariable(top);
     }
     // master not set in config file
     if (master == -1) {
-        if (!Beb_SetMaster(TOP_HARDWARE)) {
+        LOG(logINFO, ("Resetting Master to hardware settings\n"));
+        if (setMaster(MASTER_HARDWARE) == FAIL) {
             initError = FAIL;
             strcpy(initErrorMessage,
-                   "Could not reset Master flag to Beb hardware settings.\n");
+                   "Could not reset Master flag to hardware settings.\n");
             LOG(logERROR, ("%s\n\n", initErrorMessage));
             return;
         }
-        sharedMemory_lockLocalLink();
-        if (!Feb_Control_SetMaster(TOP_HARDWARE)) {
-            initError = FAIL;
-            strcpy(initErrorMessage,
-                   "Could not reset Master flag to Feb hardware settings.\n");
-            LOG(logERROR, ("%s\n\n", initErrorMessage));
-            sharedMemory_unlockLocalLink();
-            return;
-        }
-        sharedMemory_unlockLocalLink();
-        int temp = -1, temp2 = -1;
-        Beb_GetModuleConfiguration(&master, &temp, &temp2);
-        sharedMemory_lockLocalLink();
-        Feb_Control_SetMasterVariable(master);
-        sharedMemory_unlockLocalLink();
     }
 #endif
 }
 
+int checkCommandLineConfiguration() {
+    if (masterCommandLine != -1) {
+        LOG(logINFO, ("Setting %s from Command Line\n",
+                      (masterCommandLine == 1 ? "Master" : "Slave")));
+        if (setMaster(masterCommandLine == 1 ? OW_MASTER : OW_SLAVE) == FAIL) {
+            initError = FAIL;
+            sprintf(initErrorMessage, "Could not set %s from command line.\n",
+                    (masterCommandLine == 1 ? "Master" : "Slave"));
+            LOG(logERROR, (initErrorMessage));
+            return FAIL;
+        }
+    }
+
+    if (topCommandLine != -1) {
+        LOG(logINFO, ("Setting %s from Command Line\n",
+                      (topCommandLine == 1 ? "Top" : "Bottom")));
+        if (setTop(topCommandLine == 1 ? OW_TOP : OW_BOTTOM) == FAIL) {
+            initError = FAIL;
+            sprintf(initErrorMessage, "Could not set %s from command line.\n",
+                    (topCommandLine == 1 ? "Top" : "Bottom"));
+            LOG(logERROR, (initErrorMessage));
+            return FAIL;
+        }
+    }
+    return OK;
+}
+
 /* set up detector */
 
 void allocateDetectorStructureMemory() {
@@ -671,15 +702,29 @@ void allocateDetectorStructureMemory() {
 }
 
 void setupDetector() {
-
     allocateDetectorStructureMemory();
+
+    // force top or master if in config file
+    if (readConfigFile() == FAIL)
+        return;
+    // force top or master if in command line
+    if (checkCommandLineConfiguration() == FAIL)
+        return;
+
+    LOG(logINFOBLUE,
+        ("Module: %s %s %s\n", (top ? "TOP" : "BOTTOM"),
+         (master ? "MASTER" : "SLAVE"), (normal ? "NORMAL" : "SPECIAL")));
+
+    if (updateModuleId() == FAIL)
+        return;
+
+    LOG(logINFOBLUE, ("Setting Default Parameters\n"));
     resetToDefaultDacs(0);
 #ifdef VIRTUAL
     sharedMemory_setStatus(IDLE);
     setupUDPCommParameters();
 #endif
 
-    LOG(logINFOBLUE, ("Setting Default Parameters\n"));
     // setting default measurement parameters
     setNumFrames(DEFAULT_NUM_FRAMES);
     setExpTime(DEFAULT_EXPTIME);
@@ -719,14 +764,6 @@ void setupDetector() {
     }
     sharedMemory_unlockLocalLink();
 #endif
-    // force top or master if in config file
-    if (readConfigFile() == FAIL) {
-        return;
-    }
-    LOG(logINFOBLUE,
-        ("Module: %s %s %s\n", (top ? "TOP" : "BOTTOM"),
-         (master ? "MASTER" : "SLAVE"), (normal ? "NORMAL" : "SPECIAL")));
-
     if (setNumberofDestinations(numUdpDestinations) == FAIL) {
         initError = FAIL;
         strcpy(initErrorMessage, "Could not set number of udp destinations\n");
@@ -821,29 +858,38 @@ int readRegister(uint32_t offset, uint32_t *retval) {
 /* set parameters -  dr, roi */
 
 int setDynamicRange(int dr) {
-    // setting dr
-    if (dr > 0) {
-        LOG(logDEBUG1, ("Setting dynamic range: %d\n", dr));
-#ifndef VIRTUAL
-        sharedMemory_lockLocalLink();
-        if (Feb_Control_SetDynamicRange(dr)) {
-            if (!Beb_SetUpTransferParameters(dr)) {
-                LOG(logERROR, ("Could not set bit mode in the back end\n"));
-                sharedMemory_unlockLocalLink();
-                return eiger_dynamicrange;
-            }
-        }
-        sharedMemory_unlockLocalLink();
-#endif
-        eiger_dynamicrange = dr;
+    if (dr <= 0) {
+        return FAIL;
     }
-    // getting dr
-#ifndef VIRTUAL
+#ifdef VIRTUAL
+    LOG(logINFO, ("Setting dynamic range: %d\n", dr));
+#else
     sharedMemory_lockLocalLink();
-    eiger_dynamicrange = Feb_Control_GetDynamicRange();
+    if (Feb_Control_SetDynamicRange(dr)) {
+        if (!Beb_SetUpTransferParameters(dr)) {
+            LOG(logERROR, ("Could not set bit mode in the back end\n"));
+            sharedMemory_unlockLocalLink();
+            return eiger_dynamicrange;
+        }
+    }
     sharedMemory_unlockLocalLink();
 #endif
-    return eiger_dynamicrange;
+    eiger_dynamicrange = dr;
+    return OK;
+}
+
+int getDynamicRange(int *retval) {
+#ifdef VIRTUAL
+    *retval = eiger_dynamicrange;
+#else
+    sharedMemory_lockLocalLink();
+    if (!Feb_Control_GetDynamicRange(retval)) {
+        sharedMemory_unlockLocalLink();
+        return FAIL;
+    }
+    sharedMemory_unlockLocalLink();
+#endif
+    return OK;
 }
 
 /* parameters - readout */
@@ -1158,6 +1204,7 @@ int setModule(sls_detector_module myMod, char *mess) {
 
         // if quad, set M8 and PROGRAM manually
         if (!Feb_Control_SetChipSignalsToTrimQuad(1)) {
+            sharedMemory_unlockLocalLink();
             return FAIL;
         }
 
@@ -1170,6 +1217,7 @@ int setModule(sls_detector_module myMod, char *mess) {
 
             // if quad, reset M8 and PROGRAM manually
             if (!Feb_Control_SetChipSignalsToTrimQuad(0)) {
+                sharedMemory_unlockLocalLink();
                 return FAIL;
             }
 
@@ -1179,6 +1227,7 @@ int setModule(sls_detector_module myMod, char *mess) {
 
         // if quad, reset M8 and PROGRAM manually
         if (!Feb_Control_SetChipSignalsToTrimQuad(0)) {
+            sharedMemory_unlockLocalLink();
             return FAIL;
         }
 
@@ -1450,7 +1499,120 @@ int setHighVoltage(int val) {
 
 /* parameters - timing, extsig */
 
-int isMaster() { return master; }
+int setMaster(enum MASTERINDEX m) {
+    char *master_names[] = {MASTER_NAMES};
+    LOG(logINFOBLUE, ("Setting up Master flag as %s\n", master_names[m]));
+#ifdef VIRTUAL
+    switch (m) {
+    case OW_MASTER:
+        master = 1;
+        break;
+    case OW_SLAVE:
+        master = 0;
+        break;
+    default:
+        // hardware settings (do nothing)
+        break;
+    }
+#else
+    // need to set it only once via the control server
+    if (isControlServer) {
+        if (!Beb_SetMaster(m)) {
+            return FAIL;
+        }
+
+        sharedMemory_lockLocalLink();
+        if (!Feb_Control_SetMaster(m)) {
+            sharedMemory_unlockLocalLink();
+            return FAIL;
+        }
+        sharedMemory_unlockLocalLink();
+    }
+
+    // get and update master variable (cannot get from m, could be hardware)
+    if (isMaster(&master) == FAIL) {
+        return FAIL;
+    }
+    // verify for master and slave (not hardware)
+    if ((m == OW_MASTER && master == 0) || (m == OW_SLAVE && master == 1)) {
+        LOG(logERROR,
+            ("could not set master/slave. Master value retrieved %d\n",
+             master));
+        return FAIL;
+    }
+
+    // feb variable and hv comms (9m)
+    sharedMemory_lockLocalLink();
+    if (Feb_Control_SetMasterEffects(master, isControlServer) == FAIL) {
+        sharedMemory_unlockLocalLink();
+        return FAIL;
+    }
+    sharedMemory_unlockLocalLink();
+#endif
+    return OK;
+}
+
+int isMaster(int *retval) {
+    int m = -1, t = -1, n = -1;
+    if (getModuleConfiguration(&m, &t, &n) == FAIL) {
+        return FAIL;
+    }
+    *retval = m;
+    return OK;
+}
+
+int setTop(enum TOPINDEX t) {
+    char *top_names[] = {TOP_NAMES};
+    LOG(logINFOBLUE, ("Setting up Top flag as %s\n", top_names[t]));
+#ifdef VIRTUAL
+    switch (t) {
+    case OW_TOP:
+        top = 1;
+        break;
+    case OW_BOTTOM:
+        top = 0;
+        break;
+    default:
+        // hardware settings (do nothing)
+        break;
+    }
+#else
+    if (!Beb_SetTop(t)) {
+        return FAIL;
+    }
+
+    sharedMemory_lockLocalLink();
+    if (!Feb_Control_SetTop(t, 1, 1)) {
+        sharedMemory_unlockLocalLink();
+        return FAIL;
+    }
+    sharedMemory_unlockLocalLink();
+
+    // get and update top variable(cannot get from t, could be hardware)
+    if (isTop(&top) == FAIL) {
+        return FAIL;
+    }
+    // verify for master and slave (not hardware)
+    if ((t == OW_TOP && top == 0) || (t == OW_BOTTOM && top == 1)) {
+        LOG(logERROR,
+            ("could not set top/bottom. Top value retrieved %d\n", top));
+        return FAIL;
+    }
+
+    Beb_SetTopVariable(top);
+#endif
+    return OK;
+}
+
+int isTop(int *retval) {
+    int m = -1, t = -1, n = -1;
+    if (getModuleConfiguration(&m, &t, &n) == FAIL) {
+        return FAIL;
+    }
+
+    *retval = t;
+    return OK;
+}
 
 void setTiming(enum timingMode arg) {
     int ret = 0;
@@ -1923,7 +2085,8 @@ int setRateCorrection(
     else if (custom_tau_in_nsec == -1)
         custom_tau_in_nsec = Feb_Control_Get_RateTable_Tau_in_nsec();
 
-    int dr = Feb_Control_GetDynamicRange();
+    int dr = eiger_dynamicrange;
+
     // get period = subexptime if 32bit , else period = exptime if 16 bit
     int64_t actual_period =
         Feb_Control_GetSubFrameExposureTime(); // already in nsec
@@ -2285,15 +2448,17 @@ void *start_timer(void *arg) {
     }
 
     int skipData = 0;
+    int tgEnable = send_to_ten_gig;
     if (!eiger_virtual_activate ||
-        (!eiger_virtual_left_datastream && !eiger_virtual_right_datastream)) {
+        (tgEnable &&
+         (!eiger_virtual_left_datastream && !eiger_virtual_right_datastream))) {
         skipData = 1;
         LOG(logWARNING, ("Not sending Left and Right datastream\n"));
     }
-    if (!eiger_virtual_left_datastream) {
+    if (tgEnable && !eiger_virtual_left_datastream) {
         LOG(logWARNING, ("Not sending Left datastream\n"));
     }
-    if (!eiger_virtual_right_datastream) {
+    if (tgEnable && !eiger_virtual_right_datastream) {
         LOG(logWARNING, ("Not sending Right datastream\n"));
     }
 
@@ -2303,7 +2468,6 @@ void *start_timer(void *arg) {
 
     int dr = eiger_dynamicrange;
     double bytesPerPixel = (double)dr / 8.00;
-    int tgEnable = send_to_ten_gig;
     int datasize = (tgEnable ? 4096 : 1024);
     int packetsize = datasize + sizeof(sls_detector_header);
     int maxPacketsPerFrame = (tgEnable ? 4 : 16) * dr;
@@ -2321,7 +2485,7 @@ void *start_timer(void *arg) {
     const int maxRows = MAX_ROWS_PER_READOUT;
     const int packetsPerFrame = (maxPacketsPerFrame * readNRows) / maxRows;
 
-    LOG(logDEBUG1,
+    LOG(logDEBUG,
         (" dr:%d\n bytesperpixel:%f\n tgenable:%d\n datasize:%d\n "
          "packetsize:%d\n maxnumpackes:%d\n npixelsx:%d\n databytes:%d\n",
          dr, bytesPerPixel, tgEnable, datasize, packetsize, maxPacketsPerFrame,
@@ -2338,11 +2502,13 @@ void *start_timer(void *arg) {
             npixels /= 2;
         }
         LOG(logDEBUG1,
-            ("pixels:%d pixelsperpacket:%d\n", npixels, pixelsPerPacket));
+            ("npixels:%d pixelsperpacket:%d\n", npixels, pixelsPerPacket));
+        uint8_t *src = (uint8_t *)imageData;
         for (int i = 0; i < npixels; ++i) {
             if (i > 0 && i % pixelsPerPacket == 0) {
                 ++pixelVal;
             }
+
             switch (dr) {
             case 4:
                 *((uint8_t *)(imageData + i)) =
@@ -2357,6 +2523,30 @@ void *start_timer(void *arg) {
                 *((uint8_t *)(imageData + i)) =
                     eiger_virtual_test_mode ? 0xFE : (uint8_t)pixelVal;
                 break;
+            case 12:
+                if (eiger_virtual_test_mode) {
+                    // first 12 bit pixel
+                    // first 8 byte
+                    *src++ = 0xFE;
+                    // second 12bit pixel
+                    ++i;
+                    // second 8 byte
+                    *src++ = 0xEF;
+                    // third byte
+                    *src++ = 0xFF;
+                } else {
+                    // first 12 bit pixel
+                    // first 8 byte
+                    *src++ = (uint8_t)(i & 0xFF);
+                    // second 8 byte (first nibble)
+                    *src = (uint8_t)((i++ >> 8u) & 0xF);
+                    // second 12bit pixel
+                    // second 8 byte (second nibble)
+                    *src++ |= ((uint8_t)(i & 0xF) << 4u);
+                    // third byte
+                    *src++ = (uint8_t)((i >> 4u) & 0xFF);
+                }
+                break;
             case 16:
                 *((uint16_t *)(imageData + i * sizeof(uint16_t))) =
                     eiger_virtual_test_mode ? 0xFFE : (uint16_t)pixelVal;
@@ -2433,9 +2623,27 @@ void *start_timer(void *arg) {
                 // fill data
                 int dstOffset = sizeof(sls_detector_header);
                 int dstOffset2 = sizeof(sls_detector_header);
-                {
-                    for (int psize = 0; psize < datasize; psize += npixelsx) {
+                if (dr == 12) {
+                    // multiple of 768,1024,4096
+                    int copysize = 256;
+                    for (int psize = 0; psize < datasize; psize += copysize) {
+                        memcpy(packetData + dstOffset, imageData + srcOffset,
+                               copysize);
+                        memcpy(packetData2 + dstOffset2, imageData + srcOffset2,
+                               copysize);
+                        srcOffset += copysize;
+                        srcOffset2 += copysize;
+                        dstOffset += copysize;
+                        dstOffset2 += copysize;
 
+                        // reached 1 row (quarter module)
+                        if ((srcOffset % npixelsx) == 0) {
+                            srcOffset += npixelsx;
+                            srcOffset2 += npixelsx;
+                        }
+                    }
+                } else {
+                    for (int psize = 0; psize < datasize; psize += npixelsx) {
                         if (dr == 32 && tgEnable == 0) {
                             memcpy(packetData + dstOffset,
                                    imageData + srcOffset, npixelsx / 2);
@@ -2465,14 +2673,16 @@ void *start_timer(void *arg) {
                         }
                     }
                 }
-                if (eiger_virtual_left_datastream && i >= startval &&
-                    i <= endval) {
+                if ((!tgEnable ||
+                     (tgEnable && eiger_virtual_left_datastream)) &&
+                    i >= startval && i <= endval) {
                     usleep(eiger_virtual_transmission_delay_left);
                     sendUDPPacket(iRxEntry, 0, packetData, packetsize);
                     LOG(logDEBUG1, ("Sent left packet: %d\n", i));
                 }
-                if (eiger_virtual_right_datastream && i >= startval &&
-                    i <= endval) {
+                if ((!tgEnable ||
+                     (tgEnable && eiger_virtual_right_datastream)) &&
+                    i >= startval && i <= endval) {
                     usleep(eiger_virtual_transmission_delay_right);
                     sendUDPPacket(iRxEntry, 1, packetData2, packetsize);
                     LOG(logDEBUG1, ("Sent right packet: %d\n", i));
@@ -2733,9 +2943,9 @@ int copyModule(sls_detector_module *destMod, sls_detector_module *srcMod) {
 
 int calculateDataBytes() {
     if (send_to_ten_gig)
-        return setDynamicRange(-1) * ONE_GIGA_CONSTANT * TEN_GIGA_BUFFER_SIZE;
+        return eiger_dynamicrange * ONE_GIGA_CONSTANT * TEN_GIGA_BUFFER_SIZE;
     else
-        return setDynamicRange(-1) * TEN_GIGA_CONSTANT * ONE_GIGA_BUFFER_SIZE;
+        return eiger_dynamicrange * TEN_GIGA_CONSTANT * ONE_GIGA_BUFFER_SIZE;
 }
 
 int getTotalNumberOfChannels() {

slsDetectorServers/eigerDetectorServer/slsDetectorServer_defs.h

@@ -5,7 +5,7 @@
 
 #define LINKED_SERVER_NAME "eigerDetectorServer"
 
-#define REQUIRED_FIRMWARE_VERSION (29)
+#define REQUIRED_FIRMWARE_VERSION (30)
 // virtual ones renamed for consistency
 // real ones keep previous name for compatibility (already in production)
 #ifdef VIRTUAL

slsDetectorServers/gotthard2DetectorServer/slsDetectorFunctionList.c

@@ -28,12 +28,16 @@ extern int updateFlag;
 extern int checkModuleFlag;
 extern udpStruct udpDetails[MAX_UDP_DESTINATION];
 extern const enum detectorType myDetectorType;
+extern int ignoreConfigFileFlag;
 
 // Global variable from communication_funcs.c
 extern int isControlServer;
 extern void getMacAddressinString(char *cmac, int size, uint64_t mac);
 extern void getIpAddressinString(char *cip, uint32_t ip);
 
+// Variables that will be exported
+int masterCommandLine = -1;
+
 int initError = OK;
 int initCheckDone = 0;
 char initErrorMessage[MAX_STR_LENGTH];
@@ -69,6 +73,7 @@ int64_t burstPeriodReg = 0;
 int filterResistor = 0;
 int cdsGain = 0;
 int detPos[2] = {};
+int master = 1;
 
 int isInitCheckDone() { return initCheckDone; }
 
@@ -295,6 +300,18 @@ void setModuleId(int modid) {
           bus_r(MOD_ID_REG) | ((modid << MOD_ID_OFST) & MOD_ID_MSK));
 }
 
+int updateModuleId() {
+    int modid = getModuleIdInFile(&initError, initErrorMessage, ID_FILE);
+    if (initError == FAIL) {
+        return FAIL;
+    }
+#ifdef VIRTUAL
+    virtual_moduleid = modid;
+#endif
+    setModuleId(modid);
+    return OK;
+}
+
 u_int64_t getDetectorMAC() {
 #ifdef VIRTUAL
     return 0;
@@ -358,16 +375,27 @@ void initControlServer() {
 }
 
 void initStopServer() {
-
-    usleep(CTRL_SRVR_INIT_TIME_US);
-    if (mapCSP0() == FAIL) {
-        LOG(logERROR,
-            ("Stop Server: Map Fail. Dangerous to continue. Goodbye!\n"));
-        exit(EXIT_FAILURE);
-    }
+    if (!updateFlag && initError == OK) {
+        usleep(CTRL_SRVR_INIT_TIME_US);
+        LOG(logINFOBLUE, ("Configuring Stop server\n"));
+        if (mapCSP0() == FAIL) {
+            initError = FAIL;
+            strcpy(initErrorMessage,
+                   "Stop Server: Map Fail. Dangerous to continue. Goodbye!\n");
+            LOG(logERROR, (initErrorMessage));
+            initCheckDone = 1;
+            return;
+        }
 #ifdef VIRTUAL
-    sharedMemory_setStop(0);
+        sharedMemory_setStop(0);
+        // not reading config file (nothing of interest to stop server)
+        if (checkCommandLineConfiguration() == FAIL) {
+            initCheckDone = 1;
+            return;
+        }
 #endif
+    }
+    initCheckDone = 1;
 }
 
 /* set up detector */
@@ -480,15 +508,13 @@ void setupDetector() {
         return;
     }
 
-    // set module id in register
-    int modid = getModuleIdInFile(&initError, initErrorMessage, ID_FILE);
-#ifdef VIRTUAL
-    virtual_moduleid = modid;
-#endif
-    if (initError == FAIL) {
+    // master for virtual
+    if (checkCommandLineConfiguration() == FAIL)
+        return;
+
+    if (updateModuleId() == FAIL) {
         return;
     }
-    setModuleId(modid);
 
     setBurstMode(DEFAULT_BURST_MODE);
     setFilterResistor(DEFAULT_FILTER_RESISTOR);
@@ -600,6 +626,11 @@ int readConfigFile() {
         return initError;
     }
 
+    if (ignoreConfigFileFlag) {
+        LOG(logWARNING, ("Ignoring Config file\n"));
+        return OK;
+    }
+
     // require a sleep before and after the rst dac signal
     usleep(INITIAL_STARTUP_WAIT);
 
@@ -924,6 +955,21 @@ int readConfigFile() {
     return initError;
 }
 
+int checkCommandLineConfiguration() {
+    if (masterCommandLine != -1) {
+#ifdef VIRTUAL
+        master = masterCommandLine;
+#else
+        initError = FAIL;
+        strcpy(initErrorMessage,
+               "Cannot set Master from command line for this detector. "
+               "Should have been caught before!\n");
+        return FAIL;
+#endif
+    }
+    return OK;
+}
+
 /* firmware functions (resets) */
 
 void cleanFifos() {
@@ -952,7 +998,16 @@ void resetPeripheral() {
 
 /* set parameters -  dr, roi */
 
-int setDynamicRange(int dr) { return DYNAMIC_RANGE; }
+int setDynamicRange(int dr) {
+    if (dr == 16)
+        return OK;
+    return FAIL;
+}
+
+int getDynamicRange(int *retval) {
+    *retval = DYNAMIC_RANGE;
+    return OK;
+}
 
 /* parameters - timer */
 void setNumFrames(int64_t val) {
@@ -1442,6 +1497,11 @@ int setHighVoltage(int val) {
 
 /* parameters - timing */
 
+int isMaster(int *retval) {
+    *retval = master;
+    return OK;
+}
+
 void updatingRegisters() {
     LOG(logINFO, ("\tUpdating registers\n"));
     // burst
@@ -1921,9 +1981,17 @@ int checkDetectorType() {
         return -2;
     }
 
-    if ((abs(type - TYPE_GOTTHARD2_MODULE_VAL) > TYPE_TOLERANCE) &&
-        (abs(type - TYPE_GOTTHARD2_25UM_MASTER_MODULE_VAL) > TYPE_TOLERANCE) &&
-        (abs(type - TYPE_GOTTHARD2_25UM_SLAVE_MODULE_VAL) > TYPE_TOLERANCE)) {
+    if (abs(type - TYPE_GOTTHARD2_25UM_MASTER_MODULE_VAL) <= TYPE_TOLERANCE) {
+        LOG(logINFOBLUE, ("MASTER 25um Module\n"));
+        master = 1;
+    } else if (abs(type - TYPE_GOTTHARD2_25UM_SLAVE_MODULE_VAL) <=
+               TYPE_TOLERANCE) {
+        master = 0;
+        LOG(logINFOBLUE, ("SLAVE 25um Module\n"));
+    } else if (abs(type - TYPE_GOTTHARD2_MODULE_VAL) <= TYPE_TOLERANCE) {
+        master = -1;
+        LOG(logINFOBLUE, ("50um Module\n"));
+    } else {
         LOG(logERROR,
             ("Wrong Module attached! Expected %d, %d or %d for Gotthard2, got "
              "%d\n",

slsDetectorServers/gotthardDetectorServer/slsDetectorFunctionList.c

@@ -25,9 +25,11 @@ extern int debugflag;
 extern int updateFlag;
 extern udpStruct udpDetails[MAX_UDP_DESTINATION];
 extern const enum detectorType myDetectorType;
+extern int ignoreConfigFileFlag;
 
 // Variables that will be exported
 int phaseShift = DEFAULT_PHASE_SHIFT;
+int masterCommandLine = -1;
 
 // Global variable from communication_funcs.c
 extern int isControlServer;
@@ -359,16 +361,28 @@ void initControlServer() {
 }
 
 void initStopServer() {
-    if (mapCSP0() == FAIL) {
-        LOG(logERROR,
-            ("Stop Server: Map Fail. Dangerous to continue. Goodbye!\n"));
-        exit(EXIT_FAILURE);
-    }
+    if (!updateFlag && initError == OK) {
+        usleep(CTRL_SRVR_INIT_TIME_US);
+        LOG(logINFOBLUE, ("Configuring Stop server\n"));
+        if (mapCSP0() == FAIL) {
+            initError = FAIL;
+            strcpy(initErrorMessage,
+                   "Stop Server: Map Fail. Dangerous to continue. Goodbye!\n");
+            LOG(logERROR, (initErrorMessage));
+            initCheckDone = 1;
+            return;
+        }
 #ifdef VIRTUAL
-    sharedMemory_setStop(0);
+        sharedMemory_setStop(0);
 #endif
-    // to get master from file
-    readConfigFile();
+        // to get master from file
+        if (readConfigFile() == FAIL ||
+            checkCommandLineConfiguration() == FAIL) {
+            initCheckDone = 1;
+            return;
+        }
+    }
+    initCheckDone = 1;
 }
 
 /* set up detector */
@@ -421,6 +435,13 @@ void setupDetector() {
     setROI(rois); // set adcsyncreg, daqreg, chipofinterestreg, cleanfifos,
     setGbitReadout();
 
+    // no config file or not first time server
+    if (readConfigFile() == FAIL)
+        return;
+
+    if (checkCommandLineConfiguration() == FAIL)
+        return;
+
     // master, slave (25um)
     setMasterSlaveConfiguration();
 
@@ -624,6 +645,16 @@ void setGbitReadout() {
 }
 
 int readConfigFile() {
+
+    if (initError == FAIL) {
+        return initError;
+    }
+
+    if (ignoreConfigFileFlag) {
+        LOG(logWARNING, ("Ignoring Config file\n"));
+        return OK;
+    }
+
     const int fileNameSize = 128;
     char fname[fileNameSize];
     if (getAbsPath(fname, fileNameSize, CONFIG_FILE) == FAIL) {
@@ -647,7 +678,6 @@ int readConfigFile() {
     memset(key, 0, keySize);
     char value[keySize];
     memset(value, 0, keySize);
-    int scan = OK;
 
     // keep reading a line
     while (fgets(line, lineSize, fd)) {
@@ -667,19 +697,22 @@ int readConfigFile() {
                 master = 0;
                 LOG(logINFOBLUE, ("\tSlave or No Master\n"));
             } else {
-                LOG(logERROR,
-                    ("\tCould not scan masterflags %s value from config file\n",
-                     value));
-                scan = FAIL;
-                break;
+                initError = FAIL;
+                sprintf(
+                    initErrorMessage,
+                    "Could not scan masterflags %s value from config file\n",
+                    value);
+                LOG(logERROR, (initErrorMessage))
+                fclose(fd);
+                return FAIL;
             }
 
             // not first server since detector power on
             if (!detectorFirstServer) {
-                LOG(logINFOBLUE, ("\tServer has been started up before. "
-                                  "Ignoring rest of config file\n"));
+                LOG(logWARNING, ("\tServer has been started up before. "
+                                 "Ignoring rest of config file\n"));
                 fclose(fd);
-                return FAIL;
+                return OK;
             }
         }
 
@@ -688,11 +721,14 @@ int readConfigFile() {
             // convert value to int
             int ival = 0;
             if (sscanf(value, "%d", &ival) <= 0) {
-                LOG(logERROR, ("\tCould not scan parameter %s value %s from "
-                               "config file\n",
-                               key, value));
-                scan = FAIL;
-                break;
+                initError = FAIL;
+                sprintf(initErrorMessage,
+                        "Could not scan parameter %s value %s from "
+                        "config file\n",
+                        key, value);
+                LOG(logERROR, (initErrorMessage))
+                fclose(fd);
+                return FAIL;
             }
             // set value
             if (!strcasecmp(key, "masterdefaultdelay"))
@@ -710,16 +746,16 @@ int readConfigFile() {
             else if (!strcasecmp(key, "startacqdelay"))
                 startacqdelay = ival;
             else {
-                LOG(logERROR,
-                    ("\tCould not scan parameter %s from config file\n", key));
-                scan = FAIL;
-                break;
+                initError = FAIL;
+                sprintf(initErrorMessage,
+                        "Could not scan parameter %s from config file\n", key);
+                LOG(logERROR, (initErrorMessage))
+                fclose(fd);
+                return FAIL;
             }
         }
     }
     fclose(fd);
-    if (scan == FAIL)
-        exit(EXIT_FAILURE);
 
     LOG(logINFOBLUE,
         ("\tmasterdefaultdelay:%d\n"
@@ -734,13 +770,28 @@ int readConfigFile() {
     return OK;
 }
 
+int checkCommandLineConfiguration() {
+    if (masterCommandLine != -1) {
+#ifdef VIRTUAL
+        master = masterCommandLine;
+#else
+        initError = FAIL;
+        strcpy(initErrorMessage,
+               "Cannot set Master from command line for this detector. "
+               "Should have been caught before!\n");
+        return FAIL;
+#endif
+    }
+    return OK;
+}
+
 void setMasterSlaveConfiguration() {
-    LOG(logINFO, ("Reading Master Slave Configuration\n"));
-
-    // no config file or not first time server
-    if (readConfigFile() == FAIL)
+    // not the first time its being read
+    if (!detectorFirstServer) {
         return;
+    }
 
+    LOG(logINFO, ("Reading Master Slave Configuration\n"));
     // master configuration
     if (master) {
         // master default delay set, so reset delay
@@ -788,7 +839,16 @@ void setMasterSlaveConfiguration() {
 
 /* set parameters -  dr, roi */
 
-int setDynamicRange(int dr) { return DYNAMIC_RANGE; }
+int setDynamicRange(int dr) {
+    if (dr == 16)
+        return OK;
+    return FAIL;
+}
+
+int getDynamicRange(int *retval) {
+    *retval = DYNAMIC_RANGE;
+    return OK;
+}
 
 int setROI(ROI arg) {
 
@@ -1238,7 +1298,10 @@ int setHighVoltage(int val) {
 
 /* parameters - timing, extsig */
 
-int isMaster() { return master; }
+int isMaster(int *retval) {
+    *retval = master;
+    return OK;
+}
 
 void setTiming(enum timingMode arg) {
     u_int32_t addr = EXT_SIGNAL_REG;

slsDetectorServers/jungfrauDetectorServer/slsDetectorFunctionList.c

@@ -28,6 +28,7 @@ extern int updateFlag;
 extern udpStruct udpDetails[MAX_UDP_DESTINATION];
 extern int numUdpDestinations;
 extern const enum detectorType myDetectorType;
+extern int ignoreConfigFileFlag;
 
 // Global variable from communication_funcs.c
 extern int isControlServer;
@@ -392,19 +393,29 @@ void initControlServer() {
 }
 
 void initStopServer() {
-
-    usleep(CTRL_SRVR_INIT_TIME_US);
-    if (mapCSP0() == FAIL) {
-        LOG(logERROR,
-            ("Stop Server: Map Fail. Dangerous to continue. Goodbye!\n"));
-        exit(EXIT_FAILURE);
-    }
+    if (!updateFlag && initError == OK) {
+        usleep(CTRL_SRVR_INIT_TIME_US);
+        LOG(logINFOBLUE, ("Configuring Stop server\n"));
+        if (mapCSP0() == FAIL) {
+            initError = FAIL;
+            strcpy(initErrorMessage,
+                   "Stop Server: Map Fail. Dangerous to continue. Goodbye!\n");
+            LOG(logERROR, (initErrorMessage));
+            initCheckDone = 1;
+            return;
+        }
+        if (readConfigFile() == FAIL) {
+            initCheckDone = 1;
+            return;
+        }
 #ifdef VIRTUAL
-    sharedMemory_setStop(0);
-    // temp threshold and reset event (read by stop server)
-    setThresholdTemperature(DEFAULT_TMP_THRSHLD);
-    setTemperatureEvent(0);
+        sharedMemory_setStop(0);
+        // temp threshold and reset event (read by stop server)
+        setThresholdTemperature(DEFAULT_TMP_THRSHLD);
+        setTemperatureEvent(0);
 #endif
+    }
+    initCheckDone = 1;
 }
 
 /* set up detector */
@@ -643,6 +654,11 @@ int readConfigFile() {
         return initError;
     }
 
+    if (ignoreConfigFileFlag) {
+        LOG(logWARNING, ("Ignoring Config file\n"));
+        return OK;
+    }
+
     const int fileNameSize = 128;
     char fname[fileNameSize];
     if (getAbsPath(fname, fileNameSize, CONFIG_FILE) == FAIL) {
@@ -796,7 +812,16 @@ void resetPeripheral() {
 
 /* set parameters -  dr, roi */
 
-int setDynamicRange(int dr) { return DYNAMIC_RANGE; }
+int setDynamicRange(int dr) {
+    if (dr == 16)
+        return OK;
+    return FAIL;
+}
+
+int getDynamicRange(int *retval) {
+    *retval = DYNAMIC_RANGE;
+    return OK;
+}
 
 void setADCInvertRegister(uint32_t val) {
     LOG(logINFO, ("Setting ADC Port Invert Reg to 0x%x\n", val));

slsDetectorServers/moenchDetectorServer/slsDetectorFunctionList.c

@@ -436,16 +436,22 @@ void initControlServer() {
 }
 
 void initStopServer() {
-
-    usleep(CTRL_SRVR_INIT_TIME_US);
-    if (mapCSP0() == FAIL) {
-        LOG(logERROR,
-            ("Stop Server: Map Fail. Dangerous to continue. Goodbye!\n"));
-        exit(EXIT_FAILURE);
-    }
+    if (!updateFlag && initError == OK) {
+        usleep(CTRL_SRVR_INIT_TIME_US);
+        LOG(logINFOBLUE, ("Configuring Stop server\n"));
+        if (mapCSP0() == FAIL) {
+            initError = FAIL;
+            strcpy(initErrorMessage,
+                   "Stop Server: Map Fail. Dangerous to continue. Goodbye!\n");
+            LOG(logERROR, (initErrorMessage));
+            initCheckDone = 1;
+            return;
+        }
 #ifdef VIRTUAL
-    sharedMemory_setStop(0);
+        sharedMemory_setStop(0);
 #endif
+    }
+    initCheckDone = 1;
 }
 
 /* set up detector */
@@ -706,7 +712,16 @@ void resetPeripheral() {
 
 /* set parameters -  dr, adcenablemask */
 
-int setDynamicRange(int dr) { return DYNAMIC_RANGE; }
+int setDynamicRange(int dr) {
+    if (dr == 16)
+        return OK;
+    return FAIL;
+}
+
+int getDynamicRange(int *retval) {
+    *retval = DYNAMIC_RANGE;
+    return OK;
+}
 
 int setADCEnableMask(uint32_t mask) {
     if (mask == 0u) {

slsDetectorServers/mythen3DetectorServer/slsDetectorFunctionList.c

@@ -35,6 +35,9 @@ extern int isControlServer;
 extern void getMacAddressinString(char *cmac, int size, uint64_t mac);
 extern void getIpAddressinString(char *cip, uint32_t ip);
 
+// Variables that will be exported
+int masterCommandLine = -1;
+
 int initError = OK;
 int initCheckDone = 0;
 char initErrorMessage[MAX_STR_LENGTH];
@@ -289,6 +292,18 @@ void setModuleId(int modid) {
           bus_r(MOD_ID_REG) | ((modid << MOD_ID_OFST) & MOD_ID_MSK));
 }
 
+int updateModuleId() {
+    int modid = getModuleIdInFile(&initError, initErrorMessage, ID_FILE);
+    if (initError == FAIL) {
+        return FAIL;
+    }
+#ifdef VIRTUAL
+    virtual_moduleid = modid;
+#endif
+    setModuleId(modid);
+    return OK;
+}
+
 u_int64_t getDetectorMAC() {
 #ifdef VIRTUAL
     return 0;
@@ -352,16 +367,26 @@ void initControlServer() {
 }
 
 void initStopServer() {
-
-    usleep(CTRL_SRVR_INIT_TIME_US);
-    if (mapCSP0() == FAIL) {
-        LOG(logERROR,
-            ("Stop Server: Map Fail. Dangerous to continue. Goodbye!\n"));
-        exit(EXIT_FAILURE);
-    }
+    if (!updateFlag && initError == OK) {
+        usleep(CTRL_SRVR_INIT_TIME_US);
+        LOG(logINFOBLUE, ("Configuring Stop server\n"));
+        if (mapCSP0() == FAIL) {
+            initError = FAIL;
+            strcpy(initErrorMessage,
+                   "Stop Server: Map Fail. Dangerous to continue. Goodbye!\n");
+            LOG(logERROR, (initErrorMessage));
+            initCheckDone = 1;
+            return;
+        }
 #ifdef VIRTUAL
-    sharedMemory_setStop(0);
+        sharedMemory_setStop(0);
+        if (checkCommandLineConfiguration() == FAIL) {
+            initCheckDone = 1;
+            return;
+        }
 #endif
+    }
+    initCheckDone = 1;
 }
 
 /* set up detector */
@@ -407,6 +432,12 @@ void setupDetector() {
 
     allocateDetectorStructureMemory();
 
+    if (checkCommandLineConfiguration() == FAIL)
+        return;
+
+    if (updateModuleId() == FAIL)
+        return;
+
     clkDivider[READOUT_C0] = DEFAULT_READOUT_C0;
     clkDivider[READOUT_C1] = DEFAULT_READOUT_C1;
     clkDivider[SYSTEM_C0] = DEFAULT_SYSTEM_C0;
@@ -447,16 +478,6 @@ void setupDetector() {
     setASICDefaults();
     setADIFDefaults();
 
-    // set module id in register
-    int modid = getModuleIdInFile(&initError, initErrorMessage, ID_FILE);
-#ifdef VIRTUAL
-    virtual_moduleid = modid;
-#endif
-    if (initError == FAIL) {
-        return;
-    }
-    setModuleId(modid);
-
     // set trigger flow for m3 (for all timing modes)
     bus_w(FLOW_TRIGGER_REG, bus_r(FLOW_TRIGGER_REG) | FLOW_TRIGGER_MSK);
 
@@ -480,10 +501,6 @@ void setupDetector() {
     setInitialExtSignals();
     // 10G UDP
     enableTenGigabitEthernet(1);
-    getModuleIdInFile(&initError, initErrorMessage, ID_FILE);
-    if (initError == FAIL) {
-        return;
-    }
     setSettings(DEFAULT_SETTINGS);
 
     // check module type attached if not in debug mode
@@ -700,6 +717,27 @@ void setADIFDefaults() {
                           ADIF_ADDTNL_OFST_MSK)));
 }
 
+int checkCommandLineConfiguration() {
+    if (masterCommandLine != -1) {
+#ifdef VIRTUAL
+        if (masterCommandLine == 1) {
+            bus_w(SYSTEM_STATUS_REG,
+                  bus_r(SYSTEM_STATUS_REG) & ~SYSTEM_STATUS_SLV_BRD_DTCT_MSK);
+        } else {
+            bus_w(SYSTEM_STATUS_REG,
+                  bus_r(SYSTEM_STATUS_REG) | SYSTEM_STATUS_SLV_BRD_DTCT_MSK);
+        }
+#else
+        initError = FAIL;
+        strcpy(initErrorMessage,
+               "Cannot set Master from command line for this detector. "
+               "Should have been caught before!\n");
+        return FAIL;
+#endif
+    }
+    return OK;
+}
+
 /* firmware functions (resets) */
 
 void cleanFifos() {
@@ -729,46 +767,54 @@ void resetPeripheral() {
 /* set parameters -  dr, roi */
 
 int setDynamicRange(int dr) {
-    if (dr > 0) {
-        uint32_t regval = 0;
-        switch (dr) {
-        /*case 1: TODO:Not implemented in firmware yet
-            regval = CONFIG_DYNAMIC_RANGE_1_VAL;
-            break;*/
-        case 8:
-            regval = CONFIG_DYNAMIC_RANGE_8_VAL;
-            break;
-        case 16:
-            regval = CONFIG_DYNAMIC_RANGE_16_VAL;
-            break;
-        case 32:
-            regval = CONFIG_DYNAMIC_RANGE_24_VAL;
-            break;
-        default:
-            LOG(logERROR, ("Invalid dynamic range %d\n", dr));
-            return -1;
-        }
-        // set it
-        bus_w(CONFIG_REG, bus_r(CONFIG_REG) & ~CONFIG_DYNAMIC_RANGE_MSK);
-        bus_w(CONFIG_REG, bus_r(CONFIG_REG) | regval);
-        updatePacketizing();
+    if (dr <= 0) {
+        return FAIL;
     }
+    uint32_t regval = 0;
+    switch (dr) {
+    /*case 1: TODO:Not implemented in firmware yet
+        regval = CONFIG_DYNAMIC_RANGE_1_VAL;
+        break;*/
+    case 8:
+        regval = CONFIG_DYNAMIC_RANGE_8_VAL;
+        break;
+    case 16:
+        regval = CONFIG_DYNAMIC_RANGE_16_VAL;
+        break;
+    case 32:
+        regval = CONFIG_DYNAMIC_RANGE_24_VAL;
+        break;
+    default:
+        LOG(logERROR, ("Invalid dynamic range %d\n", dr));
+        return -1;
+    }
+    // set it
+    bus_w(CONFIG_REG, bus_r(CONFIG_REG) & ~CONFIG_DYNAMIC_RANGE_MSK);
+    bus_w(CONFIG_REG, bus_r(CONFIG_REG) | regval);
+    updatePacketizing();
+    return OK;
+}
 
+int getDynamicRange(int *retval) {
     uint32_t regval = bus_r(CONFIG_REG) & CONFIG_DYNAMIC_RANGE_MSK;
     switch (regval) {
     /*case CONFIG_DYNAMIC_RANGE_1_VAL: TODO:Not implemented in firmware yet
         return 1;*/
     case CONFIG_DYNAMIC_RANGE_8_VAL:
-        return 8;
+        *retval = 8;
+        break;
     case CONFIG_DYNAMIC_RANGE_16_VAL:
-        return 16;
+        *retval = 16;
+        break;
     case CONFIG_DYNAMIC_RANGE_24_VAL:
-        return 32;
+        *retval = 32;
+        break;
     default:
         LOG(logERROR, ("Invalid dynamic range %d read back\n",
                        regval >> CONFIG_DYNAMIC_RANGE_OFST));
-        return -1;
+        return FAIL;
     }
+    return OK;
 }
 
 /* set parameters -  readout */
@@ -1091,7 +1137,8 @@ void updatePacketizing() {
 
     // 10g
     if (tgEnable) {
-        const int dr = setDynamicRange(-1);
+        int dr = 0;
+        getDynamicRange(&dr);
         packetsPerFrame = 1;
         if (dr == 32 && ncounters > 1) {
             packetsPerFrame = 2;
@@ -1545,14 +1592,18 @@ int setHighVoltage(int val) {
 
 /* parameters - timing */
 
-int isMaster() {
-    return !((bus_r(SYSTEM_STATUS_REG) & SYSTEM_STATUS_SLV_BRD_DTCT_MSK) >>
-             SYSTEM_STATUS_SLV_BRD_DTCT_OFST);
+int isMaster(int *retval) {
+    int slave = ((bus_r(SYSTEM_STATUS_REG) & SYSTEM_STATUS_SLV_BRD_DTCT_MSK) >>
+                 SYSTEM_STATUS_SLV_BRD_DTCT_OFST);
+    *retval = (slave == 0 ? 1 : 0);
+    return OK;
 }
 
 void setTiming(enum timingMode arg) {
 
-    if (!isMaster() && arg == AUTO_TIMING)
+    int master = 0;
+    isMaster(&master);
+    if (master && arg == AUTO_TIMING)
         arg = TRIGGER_EXPOSURE;
 
     uint32_t addr = CONFIG_REG;
@@ -2202,7 +2253,8 @@ void *start_timer(void *arg) {
 
     const int imageSize = calculateDataBytes();
     const int tgEnable = enableTenGigabitEthernet(-1);
-    const int dr = setDynamicRange(-1);
+    int dr = 0;
+    getDynamicRange(&dr);
     int ncounters = __builtin_popcount(getCounterMask());
     int dataSize = 0;
     int packetsPerFrame = 0;
@@ -2523,7 +2575,8 @@ int copyModule(sls_detector_module *destMod, sls_detector_module *srcMod) {
 
 int calculateDataBytes() {
     int numCounters = __builtin_popcount(getCounterMask());
-    int dr = setDynamicRange(-1);
+    int dr = 0;
+    getDynamicRange(&dr);
     return (NCHAN_1_COUNTER * NCHIP * numCounters * ((double)dr / 8.00));
 }
 

slsDetectorServers/slsDetectorServer/include/programViaBlackfin.h

@@ -26,10 +26,12 @@ int preparetoCopyProgram(char *mess, char *functionType, FILE **fd,
                          uint64_t fsize);
 int eraseAndWriteToFlash(char *mess, enum PROGRAM_INDEX index,
                          char *functionType, char *clientChecksum,
-                         ssize_t fsize);
+                         ssize_t fsize, int forceDeleteNormalFile);
 int getDrive(char *mess, enum PROGRAM_INDEX index);
 /** Notify fpga not to touch flash, open src and flash drive to write */
-int openFileForFlash(char *mess, FILE **flashfd, FILE **srcfd);
+int openFileForFlash(char *mess, enum PROGRAM_INDEX index, FILE **flashfd, FILE **srcfd,
+                     int forceDeleteNormalFile);
+int checkNormalFile(char *mess, enum PROGRAM_INDEX index, int forceDeleteNormalFile);
 int eraseFlash(char *mess);
 /* write from tmp file to flash */
 int writeToFlash(char *mess, ssize_t fsize, FILE *flashfd, FILE *srcfd);

slsDetectorServers/slsDetectorServer/include/slsDetectorFunctionList.h

@@ -97,6 +97,9 @@ u_int32_t getDetectorNumber();
 #if defined(GOTTHARD2D) || defined(EIGERD) || defined(MYTHEN3D)
 int getModuleId(int *ret, char *mess);
 #endif
+#if defined(EIGERD) || defined(MYTHEN3D) || defined(GOTTHARD2D)
+int updateModuleId();
+#endif
 #if defined(GOTTHARD2D) || defined(MYTHEN3D)
 void setModuleId(int modid);
 #endif
@@ -110,7 +113,11 @@ u_int32_t getBoardRevision();
 void initControlServer();
 void initStopServer();
 #ifdef EIGERD
-void getModuleConfiguration();
+int updateModuleConfiguration();
+int getModuleConfiguration(int *m, int *t, int *n);
+#ifdef VIRTUAL
+void checkVirtual9MFlag();
+#endif
 #endif
 
 // set up detector
@@ -137,6 +144,10 @@ void setADIFDefaults();
 #if defined(GOTTHARD2D) || defined(EIGERD) || defined(JUNGFRAUD)
 int readConfigFile();
 #endif
+#if defined(GOTTHARDD) || defined(GOTTHARD2D) || defined(EIGERD) ||            \
+    defined(MYTHEN3D)
+int checkCommandLineConfiguration();
+#endif
 #ifdef EIGERD
 void resetToHardwareSettings();
 #endif
@@ -173,6 +184,7 @@ void setMasterSlaveConfiguration();
 
 // parameters - dr, roi
 int setDynamicRange(int dr);
+int getDynamicRange(int *retval);
 #ifdef GOTTHARDD
 int setROI(ROI arg);
 ROI getROI();
@@ -362,9 +374,16 @@ int getADC(enum ADCINDEX ind);
 int setHighVoltage(int val);
 
 // parameters - timing, extsig
-#if defined(MYTHEN3D) || defined(EIGERD) || defined(GOTTHARDD)
-int isMaster();
+#ifdef EIGERD
+int setMaster(enum MASTERINDEX m);
+int setTop(enum TOPINDEX  t);
+int isTop(int *retval);
 #endif
+#if defined(MYTHEN3D) || defined(EIGERD) || defined(GOTTHARDD) ||              \
+    defined(GOTTHARD2D)
+int isMaster(int *retval);
+#endif
+
 #ifdef GOTTHARD2D
 void updatingRegisters();
 #endif

slsDetectorServers/slsDetectorServer/include/slsDetectorServer_funcs.h

@@ -245,6 +245,7 @@ int get_pattern(int);
 int load_default_pattern(int);
 int get_all_threshold_energy(int);
 int get_master(int);
+int set_master(int);
 int get_csr();
 int set_gain_caps(int);
 int get_gain_caps(int);
@@ -284,9 +285,12 @@ int update_detector_server(int);
 int receive_program(int file_des, enum PROGRAM_INDEX index);
 void receive_program_via_blackfin(int file_des, enum PROGRAM_INDEX index,
                                   char *functionType, uint64_t filesize,
-                                  char *checksum, char *serverName);
+                                  char *checksum, char *serverName,
+                                  int forceDeleteNormalFile);
 void receive_program_default(int file_des, enum PROGRAM_INDEX index,
                              char *functionType, uint64_t filesize,
                              char *checksum, char *serverName);
 int get_update_mode(int);
-int set_update_mode(int);
+int set_update_mode(int);
+int get_top(int);
+int set_top(int);

slsDetectorServers/slsDetectorServer/src/programViaBlackfin.c

@@ -7,6 +7,7 @@
 #include "slsDetectorServer_defs.h"
 
 #include <string.h>
+#include <sys/stat.h>
 #include <sys/sysinfo.h>
 #include <unistd.h> // usleep
 
@@ -38,6 +39,9 @@
 
 #define CMD_GET_AMD_FLASH  "dmesg | grep Amd"
 
+#define CMD_CREATE_DEVICE_FILE_PART1 "mknod"
+#define CMD_CREATE_DEVICE_FILE_PART2 "c 90 6"
+
 #define FLASH_BUFFER_MEMORY_SIZE (128 * 1024) // 500 KB
 // clang-format on
 
@@ -274,7 +278,8 @@ int allowUpdate(char *mess, char *functionType) {
         getKernelVersion(retvals);
         snprintf(mess, MAX_STR_LENGTH,
                  "Could not update %s. Kernel version %s is too old to "
-                 "update the Amd flash/ root directory. Most likely, blackfin needs rescue or replacement. Please contact us.\n",
+                 "update the Amd flash/ root directory. Most likely, blackfin "
+                 "needs rescue or replacement. Please contact us.\n",
                  functionType, retvals);
         LOG(logERROR, (mess));
         return FAIL;
@@ -319,7 +324,7 @@ int preparetoCopyProgram(char *mess, char *functionType, FILE **fd,
 
 int eraseAndWriteToFlash(char *mess, enum PROGRAM_INDEX index,
                          char *functionType, char *clientChecksum,
-                         ssize_t fsize) {
+                         ssize_t fsize, int forceDeleteNormalFile) {
 
     memset(messageType, 0, sizeof(messageType));
     strcpy(messageType, functionType);
@@ -330,7 +335,8 @@ int eraseAndWriteToFlash(char *mess, enum PROGRAM_INDEX index,
 
     FILE *flashfd = NULL;
     FILE *srcfd = NULL;
-    if (openFileForFlash(mess, &flashfd, &srcfd) == FAIL) {
+    if (openFileForFlash(mess, index, &flashfd, &srcfd, forceDeleteNormalFile) ==
+        FAIL) {
         return FAIL;
     }
 
@@ -434,7 +440,8 @@ int getDrive(char *mess, enum PROGRAM_INDEX index) {
     return OK;
 }
 
-int openFileForFlash(char *mess, FILE **flashfd, FILE **srcfd) {
+int openFileForFlash(char *mess, enum PROGRAM_INDEX index, FILE **flashfd, FILE **srcfd,
+                     int forceDeleteNormalFile) {
     // open src file
     *srcfd = fopen(TEMP_PROG_FILE_NAME, "r");
     if (*srcfd == NULL) {
@@ -447,6 +454,11 @@ int openFileForFlash(char *mess, FILE **flashfd, FILE **srcfd) {
     }
     LOG(logDEBUG1, ("Temp file ready for reading\n"));
 
+    if (checkNormalFile(mess, index, forceDeleteNormalFile) == FAIL) {
+        fclose(*srcfd);
+        return FAIL;
+    }
+
     // open flash drive for writing
     *flashfd = fopen(flashDriveName, "w");
     if (*flashfd == NULL) {
@@ -462,6 +474,95 @@ int openFileForFlash(char *mess, FILE **flashfd, FILE **srcfd) {
     return OK;
 }
 
+int checkNormalFile(char *mess, enum PROGRAM_INDEX index, int forceDeleteNormalFile) {
+#ifndef VIRTUAL
+    // check if its a normal file or special file
+    struct stat buf;
+    if (stat(flashDriveName, &buf) == -1) {
+        sprintf(mess,
+                "Could not %s. Unable to find the flash drive %s\n",
+                messageType, flashDriveName);
+        LOG(logERROR, (mess));
+        return FAIL;
+    }
+    // zero = normal file (not char special drive file)
+    if (!S_ISCHR(buf.st_mode)) {
+        // kernel memory is not permanent
+        if (index != PROGRAM_FPGA) {
+            sprintf(mess,
+                    "Could not %s. The flash drive found is a normal file. "
+                    "Reboot board using 'rebootcontroller' command to load "
+                    "proper device tree\n",
+                    messageType);
+            LOG(logERROR, (mess));
+            return FAIL;
+        }
+
+        // user does not allow to fix it (default)
+        if (forceDeleteNormalFile == 0) {
+            sprintf(mess,
+                "Could not %s. The flash drive %s found for fpga programming is a normal file. To "
+                "fix this (by deleting this file, creating the flash drive and proceeding with "
+                "programming), re-run the programming command 'programfpga' with parameter "
+                "'--force-delete-normal-file'\n",
+                messageType, flashDriveName);
+            LOG(logERROR, (mess));
+            return FAIL;
+        }
+        
+        // fpga memory stays after a reboot, user allowed to fix it
+        LOG(logWARNING, ("Flash drive invalidated (normal file). Fixing it...\n"));
+
+        // user allows to fix it, so force delete normal file
+        char cmd[MAX_STR_LENGTH] = {0};
+        char retvals[MAX_STR_LENGTH] = {0};
+
+        if (snprintf(cmd, MAX_STR_LENGTH, "rm %s", flashDriveName) >=
+            MAX_STR_LENGTH) {
+            sprintf(mess,
+                    "Could not update %s. Command to delete normal file %s is "
+                    "too long\n",
+                    messageType, flashDriveName);
+            LOG(logERROR, (mess));
+            return FAIL;
+        }
+        if (executeCommand(cmd, retvals, logDEBUG1) == FAIL) {
+            snprintf(
+                mess, MAX_STR_LENGTH,
+                "Could not update %s. (could not delete normal file %s: %s)\n",
+                messageType, flashDriveName, retvals);
+            LOG(logERROR, (mess));
+            return FAIL;
+        }
+        LOG(logINFO, ("\tDeleted Normal File (%s)\n", flashDriveName));
+
+        // create special drive
+        if (snprintf(cmd, MAX_STR_LENGTH, "%s %s %s",
+                     CMD_CREATE_DEVICE_FILE_PART1, flashDriveName,
+                     CMD_CREATE_DEVICE_FILE_PART2) >= MAX_STR_LENGTH) {
+            sprintf(mess,
+                    "Could not update %s. Command to create special file %s is "
+                    "too long\n",
+                    messageType, flashDriveName);
+            LOG(logERROR, (mess));
+            return FAIL;
+        }
+        if (executeCommand(cmd, retvals, logDEBUG1) == FAIL) {
+            snprintf(
+                mess, MAX_STR_LENGTH,
+                "Could not update %s. (could not create special file %s: %s)\n",
+                messageType, flashDriveName, retvals);
+            LOG(logERROR, (mess));
+            return FAIL;
+        }
+        LOG(logINFO, ("\tSpecial File created (%s)\n", flashDriveName));
+    } else {
+        LOG(logINFO, ("\tValidated flash drive (not a normal file)\n"));
+    }
+#endif
+    return OK;
+}
+
 int eraseFlash(char *mess) {
     LOG(logINFO, ("\tErasing Flash...\n"));
 

slsDetectorServers/slsDetectorServer/src/programViaNios.c

@@ -8,6 +8,7 @@
 
 #include <string.h>
 #include <unistd.h> // usleep
+#include <sys/stat.h>
 
 /* global variables */
 
@@ -146,6 +147,30 @@ int getDrive(char *mess, enum PROGRAM_INDEX index) {
 }
 
 int openFileForFlash(char *mess, FILE **flashfd) {
+#ifndef VIRTUAL
+    // check if its a normal file or special file
+    struct stat buf;
+    if (stat(flashDriveName, &buf) == -1) {
+        sprintf(mess,
+                "Could not %s. Unable to find the flash drive %s\n",
+                messageType, flashDriveName);
+        LOG(logERROR, (mess));
+        return FAIL;
+    }
+    // zero = normal file (not char drive special file)
+    if (!S_ISCHR(buf.st_mode)) {
+        // memory is not permanent
+        sprintf(mess,
+                "Could not %s. The flash drive found is a normal file. "
+                "Reboot board using 'rebootcontroller' command to load "
+                "proper device tree\n",
+                messageType);
+        LOG(logERROR, (mess));
+        return FAIL;
+    }
+    LOG(logINFO, ("\tValidated flash drive (not a normal file)\n"));
+#endif
+
     *flashfd = fopen(flashDriveName, "w");
     if (*flashfd == NULL) {
         sprintf(mess,

slsDetectorServers/slsDetectorServer/src/slsDetectorServer.c

@@ -26,11 +26,19 @@ extern int sockfd;
 extern int debugflag;
 extern int updateFlag;
 extern int checkModuleFlag;
+extern int ignoreConfigFileFlag;
 
 // Global variables from slsDetectorFunctionList
 #ifdef GOTTHARDD
 extern int phaseShift;
 #endif
+#if defined(GOTTHARDD) || defined(GOTTHARD2D) || defined(EIGERD) ||            \
+    defined(MYTHEN3D)
+extern int masterCommandLine;
+#endif
+#ifdef EIGERD
+extern int topCommandLine;
+#endif
 
 void error(char *msg) { perror(msg); }
 
@@ -48,26 +56,57 @@ int main(int argc, char *argv[]) {
     updateFlag = 0;
     checkModuleFlag = 1;
     int version = 0;
+    ignoreConfigFileFlag = 0;
+#if defined(GOTTHARDD) || defined(GOTTHARD2D) || defined(EIGERD) ||            \
+    defined(MYTHEN3D)
+    masterCommandLine = -1;
+#endif
+#ifdef EIGERD
+    topCommandLine = -1;
+#endif
 
     // help message
-    char helpMessage[MAX_STR_LENGTH];
-    memset(helpMessage, 0, MAX_STR_LENGTH);
-    sprintf(
-        helpMessage,
-        "Usage: %s [arguments]\n"
-        "Possible arguments are:\n"
-        "\t-v, --version            : Software version\n"
-        "\t-p, --port <port>        : TCP communication port with client. \n"
-        "\t-g, --nomodule           : [Mythen3][Gotthard2] Generic or No "
-        "Module mode. Skips detector type checks. \n"
-        "\t-f, --phaseshift <value> : [Gotthard] only. Sets phase shift. \n"
-        "\t-d, --devel              : Developer mode. Skips firmware checks. \n"
-        "\t-u, --update             : Update mode. Skips firmware checks and "
-        "initial detector setup. \n"
-        "\t-s, --stopserver         : Stop server. Do not use as it is created "
-        "by "
-        "control server \n\n",
-        argv[0]);
+    const size_t helpMessageSize = 1200;
+    char helpMessage[helpMessageSize];
+    {
+        memset(helpMessage, 0, helpMessageSize);
+        int len = snprintf(
+            helpMessage, helpMessageSize,
+            "Usage: %s [arguments]\n"
+            "Possible arguments are:\n"
+            "\t-v, --version            : Software version\n"
+            "\t-p, --port <port>        : TCP communication port with client. "
+            "\n"
+            "\t-g, --nomodule           : [Mythen3][Gotthard2] \n"
+            "\t                           Generic or No Module mode. Skips "
+            "detector type checks. \n"
+            "\t-f, --phaseshift <value> : [Gotthard] only. Sets phase shift. \n"
+            "\t-d, --devel              : Developer mode. Skips firmware "
+            "checks. \n"
+            "\t-u, --update             : Update mode. Skips firmware checks "
+            "and "
+            "initial detector setup. \n"
+            "\t-i, --ignore-config      : "
+            "[Eiger][Jungfrau][Gotthard][Gotthard2] \n"
+            "\t                           Ignore config file. \n"
+            "\t-m, --master <master>    : "
+            "[Eiger][Mythen3][Gotthard][Gotthard2] \n"
+            "\t                           Set Master to 0 or 1. Precedence "
+            "over "
+            "config file. Only for virtual servers except Eiger. \n"
+            "\t-t, --top <top>          : [Eiger] Set Top to 0 or 1. "
+            "Precedence "
+            "over config file. \n"
+            "\t-s, --stopserver         : Stop server. Do not use as it is "
+            "created "
+            "by control server \n\n",
+            argv[0]);
+        if (len >= (int)helpMessageSize) {
+            LOG(logERROR, ("Help for Server command line arguments size %d "
+                           "exceed capacity of %d characters\n",
+                           len, helpMessageSize));
+        }
+    }
 
     // parse command line for config
     static struct option long_options[] = {
@@ -80,6 +119,9 @@ int main(int argc, char *argv[]) {
         {"nomodule", no_argument, NULL, 'g'}, // generic
         {"devel", no_argument, NULL, 'd'},
         {"update", no_argument, NULL, 'u'},
+        {"ignore-config", no_argument, NULL, 'i'},
+        {"master", required_argument, NULL, 'm'},
+        {"top", required_argument, NULL, 't'},
         {"stopserver", no_argument, NULL, 's'},
         {NULL, 0, NULL, 0}};
 
@@ -89,7 +131,8 @@ int main(int argc, char *argv[]) {
     int c = 0;
 
     while (c != -1) {
-        c = getopt_long(argc, argv, "hvp:f:gdus", long_options, &option_index);
+        c = getopt_long(argc, argv, "hvp:f:gduim:t:s", long_options,
+                        &option_index);
 
         // Detect the end of the options
         if (c == -1)
@@ -160,6 +203,57 @@ int main(int argc, char *argv[]) {
             isControlServer = 0;
             break;
 
+        case 'i':
+#if defined(EIGERD) || defined(GOTTHARDD) || defined(GOTTHARD2D) ||            \
+    defined(JUNGFRAUD)
+            LOG(logINFO, ("Ignoring config file\n"));
+            ignoreConfigFileFlag = 1;
+#else
+            LOG(logERROR, ("No server config files for this detector\n"));
+            exit(EXIT_FAILURE);
+#endif
+            break;
+
+        case 'm':
+#if (defined(MYTHEN3D) || defined(GOTTHARDD) || defined(GOTTHARD2D)) &&        \
+    !defined(VIRTUAL)
+            LOG(logERROR, ("Cannot set master via the detector server for this "
+                           "detector\n"));
+            exit(EXIT_FAILURE);
+#elif defined(GOTTHARDD) || defined(GOTTHARD2D) || defined(EIGERD) ||          \
+    defined(MYTHEN3D)
+            if (sscanf(optarg, "%d", &masterCommandLine) != 1) {
+                LOG(logERROR, ("Cannot scan master argument\n%s", helpMessage));
+                exit(EXIT_FAILURE);
+            }
+            if (masterCommandLine == 1) {
+                LOG(logINFO, ("Detector Master mode\n"));
+            } else {
+                LOG(logINFO, ("Detector Slave mode\n"));
+            }
+#else
+            LOG(logERROR, ("No master implemented for this detector server\n"));
+            exit(EXIT_FAILURE);
+#endif
+            break;
+
+        case 't':
+#ifdef EIGERD
+            if (sscanf(optarg, "%d", &topCommandLine) != 1) {
+                LOG(logERROR, ("Cannot scan top argument\n%s", helpMessage));
+                exit(EXIT_FAILURE);
+            }
+            if (topCommandLine == 1) {
+                LOG(logINFO, ("Detector Top mode\n"));
+            } else {
+                LOG(logINFO, ("Detector Bottom mode\n"));
+            }
+#else
+            LOG(logERROR, ("No top implemented for this detector server\n"));
+            exit(EXIT_FAILURE);
+#endif
+            break;
+
         case 'h':
             printf("%s", helpMessage);
             exit(EXIT_SUCCESS);

slsDetectorServers/slsDetectorServer/src/slsDetectorServer_funcs.c

@@ -54,6 +54,7 @@ int sockfd = 0;
 int debugflag = 0;
 int updateFlag = 0;
 int checkModuleFlag = 1;
+int ignoreConfigFileFlag = 0;
 
 udpStruct udpDetails[MAX_UDP_DESTINATION];
 int numUdpDestinations = 1;
@@ -468,6 +469,9 @@ void function_table() {
     flist[F_UPDATE_DETECTOR_SERVER] = &update_detector_server;
     flist[F_GET_UPDATE_MODE] = &get_update_mode;
     flist[F_SET_UPDATE_MODE] = &set_update_mode;
+    flist[F_SET_MASTER] = &set_master;
+    flist[F_GET_TOP] = &get_top;
+    flist[F_SET_TOP] = &set_top;
 
     // check
     if (NUM_DET_FUNCTIONS >= RECEIVER_ENUM_START) {
@@ -2815,6 +2819,9 @@ int set_dynamic_range(int file_des) {
 #endif
 #if defined(EIGERD) || defined(MYTHEN3D)
         case 8:
+#ifdef EIGERD
+        case 12:
+#endif
         case 16:
         case 32:
 #endif
@@ -2822,14 +2829,25 @@ int set_dynamic_range(int file_des) {
     defined(MOENCHD) || defined(GOTTHARD2D)
         case 16:
 #endif
-            retval = setDynamicRange(dr);
-            LOG(logDEBUG1, ("Dynamic range: %d\n", retval));
-            if (retval == -1) {
-                ret = FAIL;
-                sprintf(mess, "Could not get dynamic range.\n");
-                LOG(logERROR, (mess));
+            if (dr >= 0) {
+                ret = setDynamicRange(dr);
+                if (ret == FAIL) {
+                    sprintf(mess, "Could not set dynamic range to %d\n", dr);
+                    LOG(logERROR, (mess));
+                }
+            }
+
+            // get
+            if (ret == OK) {
+                ret = getDynamicRange(&retval);
+                if (ret == FAIL) {
+                    strcpy(mess, "Could not get dynamic range\n");
+                    LOG(logERROR, (mess));
+                } else {
+                    LOG(logDEBUG1, ("Dynamic range: %d\n", retval));
+                    validate(&ret, mess, dr, retval, "set dynamic range", DEC);
+                }
             }
-            validate(&ret, mess, dr, retval, "set dynamic range", DEC);
             break;
         default:
             modeNotImplemented("Dynamic range", dr);
@@ -3977,29 +3995,27 @@ int check_version(int file_des) {
         return printSocketReadError();
 
     // check software- firmware compatibility and basic tests
-    if (isControlServer) {
-        LOG(logDEBUG1, ("Checking software-firmware compatibility and basic "
-                        "test result\n"));
+    LOG(logDEBUG1, ("Checking software-firmware compatibility and basic "
+                    "test result\n"));
 
-        // check if firmware check is done
+    // check if firmware check is done
+    if (!isInitCheckDone()) {
+        usleep(3 * 1000 * 1000);
         if (!isInitCheckDone()) {
-            usleep(3 * 1000 * 1000);
-            if (!isInitCheckDone()) {
-                ret = FAIL;
-                strcpy(mess, "Firmware Software Compatibility Check (Server "
-                             "Initialization) "
-                             "still not done done in server. Unexpected.\n");
-                LOG(logERROR, (mess));
-            }
+            ret = FAIL;
+            strcpy(mess, "Server Initialization still not done done in server. "
+                         "Unexpected.\n");
+            LOG(logERROR, (mess));
         }
-        // check firmware check result
-        if (ret == OK) {
-            char *firmware_message = NULL;
-            if (getInitResult(&firmware_message) == FAIL) {
-                ret = FAIL;
-                strcpy(mess, firmware_message);
-                LOG(logERROR, (mess));
-            }
+    }
+
+    // check firmware check result
+    if (ret == OK) {
+        char *firmware_message = NULL;
+        if (getInitResult(&firmware_message) == FAIL) {
+            ret = FAIL;
+            strcpy(mess, firmware_message);
+            LOG(logERROR, (mess));
         }
     }
 
@@ -4650,11 +4666,17 @@ int set_read_n_rows(int file_des) {
             LOG(logERROR, (mess));
         } else {
 #ifdef EIGERD
-            int dr = setDynamicRange(GET_FLAG);
+            int dr = 0;
+            ret = getDynamicRange(&dr);
             int isTenGiga = enableTenGigabitEthernet(GET_FLAG);
             unsigned int maxnl = MAX_ROWS_PER_READOUT;
             unsigned int maxnp = (isTenGiga ? 4 : 16) * dr;
-            if ((arg * maxnp) % maxnl) {
+            // get dr fail
+            if (ret == FAIL) {
+                strcpy(mess,
+                       "Could not read n rows (failed to get dynamic range)\n");
+                LOG(logERROR, (mess));
+            } else if ((arg * maxnp) % maxnl) {
                 ret = FAIL;
                 sprintf(mess,
                         "Could not set number of rows to %d. For %d bit "
@@ -4862,6 +4884,7 @@ int is_udp_configured() {
             LOG(logWARNING, ("%s", configureMessage));
             return FAIL;
         }
+        // virtual: no check (can be eth name: lo, ip: 127.0.0.1)
 #ifndef VIRTUAL
         if (udpDetails[i].dstmac == 0) {
             sprintf(configureMessage,
@@ -7111,7 +7134,10 @@ int get_receiver_parameters(int file_des) {
     }
 
     // dynamic range
-    i32 = setDynamicRange(GET_FLAG);
+    ret = getDynamicRange(&i32);
+    if (ret == FAIL) {
+        i32 = 0;
+    }
     n += sendData(file_des, &i32, sizeof(i32), INT32);
     if (n < 0)
         return printSocketReadError();
@@ -8193,14 +8219,60 @@ int get_master(int file_des) {
 
     LOG(logDEBUG1, ("Getting master\n"));
 
-#if !defined(MYTHEN3D) && !defined(EIGERD) && !defined(GOTTHARDD)
+#if !defined(MYTHEN3D) && !defined(EIGERD) && !defined(GOTTHARDD) &&           \
+    !defined(GOTTHARD2D)
     functionNotImplemented();
 #else
-    retval = isMaster();
+    ret = isMaster(&retval);
+    if (ret == FAIL) {
+        strcpy(mess, "Could not get master\n");
+        LOG(logERROR, (mess));
+    }
 #endif
     return Server_SendResult(file_des, INT32, &retval, sizeof(retval));
 }
 
+int set_master(int file_des) {
+    ret = OK;
+    memset(mess, 0, sizeof(mess));
+    int arg = -1;
+
+    if (receiveData(file_des, &arg, sizeof(arg), INT32) < 0)
+        return printSocketReadError();
+    LOG(logDEBUG1, ("Setting master: %u\n", (int)arg));
+
+#ifndef EIGERD
+    functionNotImplemented();
+#else
+    // only set
+    if (Server_VerifyLock() == OK) {
+        if ((check_detector_idle("set master") == OK) &&
+            (arg != 0 && arg != 1)) {
+            ret = FAIL;
+            sprintf(mess, "Could not set master. Invalid argument %d.\n", arg);
+            LOG(logERROR, (mess));
+        } else {
+            ret = setMaster(arg == 1 ? OW_MASTER : OW_SLAVE);
+            if (ret == FAIL) {
+                strcpy(mess, "Could not set master\n");
+                LOG(logERROR, (mess));
+            } else {
+                int retval = 0;
+                ret = isMaster(&retval);
+                if (ret == FAIL) {
+                    strcpy(mess, "Could not get master\n");
+                    LOG(logERROR, (mess));
+                } else {
+                    LOG(logDEBUG1, ("master retval: %u\n", retval));
+                    validate(&ret, mess, arg, retval, "set master", DEC);
+                }
+            }
+        }
+    }
+#endif
+    return Server_SendResult(file_des, INT32, NULL, 0);
+}
+
 int get_csr(int file_des) {
     ret = OK;
     memset(mess, 0, sizeof(mess));
@@ -9372,6 +9444,15 @@ int receive_program(int file_des, enum PROGRAM_INDEX index) {
             LOG(logINFO, ("\tServer Name: %s\n", serverName));
         }
 
+#if !defined(GOTTHARD2D) && !defined(MYTHEN3D) && !defined(EIGERD)
+        int forceDeleteNormalFile = 0;
+        if (receiveData(file_des, &forceDeleteNormalFile,
+                        sizeof(forceDeleteNormalFile), INT32) < 0)
+            return printSocketReadError();
+        LOG(logINFO,
+            ("\tForce Delete Normal File flag? %s\n", (forceDeleteNormalFile ? "Y" : "N")));
+#endif
+
         // in same folder as current process (will also work for virtual then
         // with write permissions)
         {
@@ -9396,7 +9477,7 @@ int receive_program(int file_des, enum PROGRAM_INDEX index) {
                                     checksum, serverName);
 #else
             receive_program_via_blackfin(file_des, index, functionType,
-                                         filesize, checksum, serverName);
+                                         filesize, checksum, serverName, forceDeleteNormalFile);
 #endif
         }
 
@@ -9412,7 +9493,7 @@ int receive_program(int file_des, enum PROGRAM_INDEX index) {
 
 void receive_program_via_blackfin(int file_des, enum PROGRAM_INDEX index,
                                   char *functionType, uint64_t filesize,
-                                  char *checksum, char *serverName) {
+                                  char *checksum, char *serverName, int forceDeleteNormalFile) {
 
 #if !defined(JUNGFRAUD) && !defined(CHIPTESTBOARDD) && !defined(MOENCHD) &&    \
     !defined(GOTTHARDD)
@@ -9511,7 +9592,7 @@ void receive_program_via_blackfin(int file_des, enum PROGRAM_INDEX index,
     case PROGRAM_FPGA:
     case PROGRAM_KERNEL:
         ret = eraseAndWriteToFlash(mess, index, functionType, checksum,
-                                   totalsize);
+                                   totalsize, forceDeleteNormalFile);
         break;
     case PROGRAM_SERVER:
         ret = moveBinaryFile(mess, serverName, TEMP_PROG_FILE_NAME,
@@ -9673,5 +9754,71 @@ int set_update_mode(int file_des) {
         }
     }
 
+    return Server_SendResult(file_des, INT32, NULL, 0);
+}
+
+int get_top(int file_des) {
+    ret = OK;
+    memset(mess, 0, sizeof(mess));
+    int retval = -1;
+    LOG(logDEBUG1, ("Getting top\n"));
+
+#ifndef EIGERD
+    functionNotImplemented();
+#else
+    // get only
+    ret = isTop(&retval);
+    if (ret == FAIL) {
+        strcpy(mess, "Could not get Top\n");
+        LOG(logERROR, (mess));
+    } else {
+        LOG(logDEBUG1, ("retval top: %d\n", retval));
+    }
+#endif
+    return Server_SendResult(file_des, INT32, &retval, sizeof(retval));
+}
+
+int set_top(int file_des) {
+    ret = OK;
+    memset(mess, 0, sizeof(mess));
+    int arg = -1;
+
+    if (receiveData(file_des, &arg, sizeof(arg), INT32) < 0)
+        return printSocketReadError();
+    LOG(logDEBUG1, ("Setting top : %u\n", arg));
+
+#ifndef EIGERD
+    functionNotImplemented();
+#else
+
+    // only set
+    if (Server_VerifyLock() == OK) {
+        if (arg != 0 && arg != 1) {
+            ret = FAIL;
+            sprintf(
+                mess,
+                "Could not set top mode. Invalid value: %d. Must be 0 or 1\n",
+                arg);
+            LOG(logERROR, (mess));
+        } else {
+            ret = setTop(arg == 1 ? OW_TOP : OW_BOTTOM);
+            if (ret == FAIL) {
+                sprintf(mess, "Could not set %s\n",
+                        (arg == 1 ? "Top" : "Bottom"));
+                LOG(logERROR, (mess));
+            } else {
+                int retval = -1;
+                ret = isTop(&retval);
+                if (ret == FAIL) {
+                    strcpy(mess, "Could not get Top mode\n");
+                    LOG(logERROR, (mess));
+                } else {
+                    LOG(logDEBUG1, ("retval top: %d\n", retval));
+                    validate(&ret, mess, arg, retval, "set top mode", DEC);
+                }
+            }
+        }
+    }
+#endif
     return Server_SendResult(file_des, INT32, NULL, 0);
 }

slsDetectorSoftware/CMakeLists.txt

@@ -7,6 +7,7 @@ set(SOURCES
     src/CmdProxy.cpp
     src/CmdParser.cpp
     src/Pattern.cpp
+    src/CtbConfig.cpp
 )
 
 add_library(slsDetectorObject OBJECT

slsDetectorSoftware/include/sls/Detector.h

@@ -193,6 +193,12 @@ class Detector {
      */
     void setFlipRows(bool value, Positions pos = {});
 
+    /** [Eiger][Mythen3][Gotthard1] via stop server **/
+    Result<bool> getMaster(Positions pos = {}) const;
+
+    /** [Eiger] Set half module to master and the others to slaves */
+    void setMaster(bool value, int pos);
+
     Result<bool> isVirtualDetectorServer(Positions pos = {}) const;
     ///@}
 
@@ -284,7 +290,7 @@ class Detector {
     Result<int> getDynamicRange(Positions pos = {}) const;
 
     /**
-     * [Eiger] Options: 4, 8, 16, 32. If i is 32, also sets clkdivider to 2,
+     * [Eiger] Options: 4, 8, 12, 16, 32. If i is 32, also sets clkdivider to 2,
      * else sets clkdivider to 1 \n [Mythen3] Options: 8, 16, 32 \n
      * [Jungfrau][Gotthard][Ctb][Moench][Mythen3][Gotthard2] 16
      */
@@ -586,12 +592,17 @@ class Detector {
     /** Options: IDLE, TRANSMITTING, RUNNING */
     Result<defs::runStatus> getReceiverStatus(Positions pos = {}) const;
 
-    Result<int64_t> getFramesCaught(Positions pos = {}) const;
+    /** Gets the number of frames caught for each port in receiver. */
+    Result<std::vector<int64_t>> getFramesCaught(Positions pos = {}) const;
 
     /** Gets the number of missing packets for each port in receiver. Negative
      * number denotes extra packets. */
     Result<std::vector<int64_t>> getNumMissingPackets(Positions pos = {}) const;
 
+    /** Gets frame index for each port in receiver. */
+    Result<std::vector<int64_t>>
+    getRxCurrentFrameIndex(Positions pos = {}) const;
+
     /** [Eiger][Jungfrau][Moench][CTB] */
     Result<uint64_t> getNextFrameNumber(Positions pos = {}) const;
 
@@ -1151,6 +1162,12 @@ class Detector {
     void setDataStream(const defs::portPosition port, const bool enable,
                        Positions pos = {});
 
+    /** [Eiger] Advanced */
+    Result<bool> getTop(Positions pos = {}) const;
+
+    /** [Eiger] Advanced. Default is hardware default */
+    void setTop(bool value, Positions pos = {});
+
     ///@}
 
     /** @name Jungfrau Specific */
@@ -1448,9 +1465,6 @@ class Detector {
      * (internal gating). Gate index: 0-2, -1 for all */
     Result<std::array<ns, 3>> getGateDelayForAllGates(Positions pos = {}) const;
 
-    /** [Eiger][Mythen3][Gotthard1] via stop server **/
-    Result<bool> getMaster(Positions pos = {}) const;
-
     // TODO! check if we really want to expose this !!!!!
     Result<int> getChipStatusRegister(Positions pos = {}) const;
 
@@ -1599,6 +1613,14 @@ class Detector {
 
     /** [CTB] Default is enabled. */
     void setLEDEnable(bool enable, Positions pos = {});
+
+
+    void setDacNames(const std::vector<std::string> names);
+
+    std::vector<std::string> getDacNames() const;
+
+    defs::dacIndex getDacIndex(const std::string& name);
+    std::string getDacName(defs::dacIndex i);
     ///@}
 
     /** @name Pattern */
@@ -1733,10 +1755,13 @@ class Detector {
     /**  [Jungfrau][Gotthard][CTB][Moench][Mythen3][Gotthard2]
      * Advanced user Function!
      * Program firmware from command line, after which detector controller is
-     * rebooted. [Jungfrau][CTB][Moench] fname is a pof file (full path) \n
-     * [Mythen3][Gotthard2] fname is an rbf file (full path)
+     * rebooted. forceDeleteNormalFile is true, if normal file found
+     * in device tree, it must be deleted, a new device drive created and
+     * programming continued.[Jungfrau][CTB][Moench] fname is a pof file (full
+     * path) \n [Mythen3][Gotthard2] fname is an rbf file (full path)
      */
-    void programFPGA(const std::string &fname, Positions pos = {});
+    void programFPGA(const std::string &fname, const bool forceDeleteNormalFile,
+                     Positions pos = {});
 
     /** [Jungfrau][CTB][Moench]  Advanced user Function!  */
     void resetFPGA(Positions pos = {});
@@ -1902,7 +1927,6 @@ class Detector {
      */
     std::string getUserDetails() const;
 
-    Result<uint64_t> getRxCurrentFrameIndex(Positions pos = {}) const;
     ///@}
 
   private:

slsDetectorSoftware/src/CmdProxy.cpp

@@ -1056,11 +1056,10 @@ std::string CmdProxy::TemperatureValues(int action) {
 std::string CmdProxy::Dac(int action) {
     std::ostringstream os;
     os << cmd << ' ';
-
+    auto type = det->getDetectorType().squash();
     // dac indices only for ctb
     if (args.size() > 0 && action != defs::HELP_ACTION) {
-        if (is_int(args[0]) &&
-            det->getDetectorType().squash() != defs::CHIPTESTBOARD) {
+        if (is_int(args[0]) && type != defs::CHIPTESTBOARD) {
             throw sls::RuntimeError(
                 "Dac indices can only be used for chip test board. Use daclist "
                 "to get list of dac names for current detector.");
@@ -1077,7 +1076,14 @@ std::string CmdProxy::Dac(int action) {
         if (args.empty())
             WrongNumberOfParameters(1); // This prints slightly wrong
 
-        defs::dacIndex dacIndex = StringTo<defs::dacIndex>(args[0]);
+        defs::dacIndex dacIndex{};
+        //TODO! Remove if
+        if (type == defs::CHIPTESTBOARD && !is_int(args[0])) {
+            dacIndex = det->getDacIndex(args[0]);
+        } else {
+            dacIndex = StringTo<defs::dacIndex>(args[0]);
+        }
+
         bool mV = false;
 
         if (args.size() == 2) {
@@ -1095,7 +1101,11 @@ std::string CmdProxy::Dac(int action) {
         if (args.empty())
             WrongNumberOfParameters(1); // This prints slightly wrong
 
-        defs::dacIndex dacIndex = StringTo<defs::dacIndex>(args[0]);
+        defs::dacIndex dacIndex{};
+        if (type == defs::CHIPTESTBOARD && !is_int(args[0]))
+            dacIndex = det->getDacIndex(args[0]);
+        else
+            dacIndex = StringTo<defs::dacIndex>(args[0]);
         bool mV = false;
         if (args.size() == 3) {
             if ((args[2] != "mv") && (args[2] != "mV")) {
@@ -1115,6 +1125,41 @@ std::string CmdProxy::Dac(int action) {
     return os.str();
 }
 
+std::string CmdProxy::DacList(const int action) {
+    std::ostringstream os;
+    os << cmd << ' ';
+    if (action == slsDetectorDefs::HELP_ACTION) {
+        os << "\n\t[dacname1 dacname2 .. dacname18] \n\t\t[ChipTestBoard] Set "
+              "the list of dac names for this detector.\n\t\t[All] Gets the "
+              "list "
+              "of "
+              "dac names for every dac for this detector."
+           << '\n';
+    } else if (action == slsDetectorDefs::GET_ACTION) {
+        if (!args.empty()) {
+            WrongNumberOfParameters(0);
+        }
+        auto t = det->getDacNames();
+        os << sls::ToString(t) << '\n';
+    } else if (action == slsDetectorDefs::PUT_ACTION) {
+        if (det->getDetectorType().squash() != defs::CHIPTESTBOARD) {
+            throw sls::RuntimeError("This detector already has fixed dac "
+                                    "names. Cannot change them.");
+        }
+        if (det_id != -1) {
+            throw sls::RuntimeError("Cannot configure dacnames at module level");
+        }
+        if (args.size() != 18) {
+            WrongNumberOfParameters(18);
+        }
+        det->setDacNames(args);
+        os << ToString(args) << '\n';
+    } else {
+        throw sls::RuntimeError("Unknown action");
+    }
+    return os.str();
+}
+
 std::string CmdProxy::DacValues(int action) {
     std::ostringstream os;
     os << cmd << ' ';
@@ -1134,13 +1179,15 @@ std::string CmdProxy::DacValues(int action) {
             WrongNumberOfParameters(1);
         }
         auto t = det->getDacList();
+        auto names = det->getDacNames();
+        auto name_it = names.begin();
         os << '[';
         auto it = t.cbegin();
-        os << ToString(*it) << ' ';
+        os << ToString(*name_it++) << ' ';
         os << OutString(det->getDAC(*it++, mv, std::vector<int>{det_id}))
            << (!args.empty() ? " mV" : "");
         while (it != t.cend()) {
-            os << ", " << ToString(*it) << ' ';
+            os << ", " << ToString(*name_it++) << ' ';
             os << OutString(det->getDAC(*it++, mv, std::vector<int>{det_id}))
                << (!args.empty() ? " mV" : "");
         }
@@ -1274,40 +1321,6 @@ std::string CmdProxy::DetectorStatus(int action) {
     return os.str();
 }
 
-std::string CmdProxy::RxMissingPackets(int action) {
-    std::ostringstream os;
-    os << cmd << ' ';
-    if (action == defs::HELP_ACTION) {
-        os << "Number of missing packets for each port in receiver. If "
-              "negative, they are packets in excess. "
-           << '\n';
-    } else if (action == defs::GET_ACTION) {
-        if (!args.empty()) {
-            WrongNumberOfParameters(0);
-        }
-        auto mp = det->getNumMissingPackets(std::vector<int>{det_id});
-        /*
-        auto tmp = det->getNumMissingPackets(std::vector<int>{det_id});
-        // convert to signed missing packets (to get excess)
-        Result<std::vector<int64_t>> mp(tmp.size());
-        for (unsigned int i = 0; i < mp.size(); ++i) {
-            mp[i] = static_cast<int64_t>(tmp[i]);
-        }
-        OR
-        Result<std::vector<int64_t>> tmp;
-        for (auto val : tmp) {
-            mp.push_back(static_cast<int64_t>(val));
-        }
-        */
-        os << OutString(mp) << '\n';
-    } else if (action == defs::PUT_ACTION) {
-        throw sls::RuntimeError("Cannot put");
-    } else {
-        throw sls::RuntimeError("Unknown action");
-    }
-    return os.str();
-}
-
 std::string CmdProxy::Scan(int action) {
     std::ostringstream os;
     os << cmd << ' ';
@@ -2866,19 +2879,31 @@ std::string CmdProxy::ProgramFpga(int action) {
     std::ostringstream os;
     os << cmd << ' ';
     if (action == defs::HELP_ACTION) {
-        os << "[fname.pof | fname.rbf (full path)]\n\t[Jungfrau][Ctb][Moench] "
-              "Programs FPGA from pof file (full path). Then, detector "
-              "controller is rebooted \n\t[Mythen3][Gotthard2] Programs FPGA "
-              "from rbf file (full path). Then, detector controller is "
-              "rebooted."
+        os << "[fname.pof | fname.rbf (full "
+              "path)][(opitonal)--force-delete-normal-file]\n\t[Jungfrau][Ctb]["
+              "Moench] Programs FPGA from pof file (full path). Then, detector "
+              "controller is rebooted. \n\t\tUse --force-delete-normal-file "
+              "argument, if normal file found in device tree, it must be "
+              "deleted, a new device drive created and programming "
+              "continued.\n\t[Mythen3][Gotthard2] Programs FPGA from rbf file "
+              "(full path). Then, detector controller is rebooted."
            << '\n';
     } else if (action == defs::GET_ACTION) {
         throw sls::RuntimeError("Cannot get");
     } else if (action == defs::PUT_ACTION) {
-        if (args.size() != 1) {
+        bool forceDeteleNormalFile = false;
+        if (args.size() == 2) {
+            if (args[1] != "--force-delete-normal-file") {
+                throw sls::RuntimeError(
+                    "Could not scan second argument. Did you "
+                    "mean --force-delete-normal-file?");
+            }
+            forceDeteleNormalFile = true;
+        } else if (args.size() != 1) {
             WrongNumberOfParameters(1);
         }
-        det->programFPGA(args[0], std::vector<int>{det_id});
+        det->programFPGA(args[0], forceDeteleNormalFile,
+                         std::vector<int>{det_id});
         os << "successful\n";
     } else {
         throw sls::RuntimeError("Unknown action");

slsDetectorSoftware/src/CmdProxy.h

@@ -784,6 +784,7 @@ class CmdProxy {
         {"trimen", &CmdProxy::TrimEnergies},
         {"gappixels", &CmdProxy::GapPixels},
         {"fliprows", &CmdProxy::fliprows},
+        {"master", &CmdProxy::master},
 
         /* acquisition parameters */
         {"acquire", &CmdProxy::Acquire},
@@ -836,7 +837,7 @@ class CmdProxy {
 
         /* dacs */
         {"dac", &CmdProxy::Dac},
-        {"daclist", &CmdProxy::daclist},
+        {"daclist", &CmdProxy::DacList},
         {"dacvalues", &CmdProxy::DacValues},
         {"resetdacs", &CmdProxy::ResetDacs},
         {"defaultdac", &CmdProxy::DefaultDac},
@@ -859,7 +860,8 @@ class CmdProxy {
         {"rx_status", &CmdProxy::ReceiverStatus},
         {"status", &CmdProxy::DetectorStatus},
         {"rx_framescaught", &CmdProxy::rx_framescaught},
-        {"rx_missingpackets", &CmdProxy::RxMissingPackets},
+        {"rx_missingpackets", &CmdProxy::rx_missingpackets},
+        {"rx_frameindex", &CmdProxy::rx_frameindex},
         {"nextframenumber", &CmdProxy::nextframenumber},
         {"trigger", &CmdProxy::Trigger},
         {"scan", &CmdProxy::Scan},
@@ -942,6 +944,7 @@ class CmdProxy {
         {"pulsechip", &CmdProxy::PulseChip},
         {"quad", &CmdProxy::Quad},
         {"datastream", &CmdProxy::DataStream},
+        {"top", &CmdProxy::top},
 
         /* Jungfrau Specific */
         {"chipversion", &CmdProxy::chipversion},
@@ -1084,8 +1087,7 @@ class CmdProxy {
         {"framecounter", &CmdProxy::framecounter},
         {"runtime", &CmdProxy::runtime},
         {"frametime", &CmdProxy::frametime},
-        {"user", &CmdProxy::UserDetails},
-        {"rx_frameindex", &CmdProxy::rx_frameindex}
+        {"user", &CmdProxy::UserDetails}
 
     };
 
@@ -1109,7 +1111,6 @@ class CmdProxy {
     /* acquisition parameters */
     std::string Acquire(int action);
     std::string Exptime(int action);
-    std::string DynamicRange(int action);
     std::string ReadoutSpeed(int action);
     std::string Adcphase(int action);
     std::string Dbitphase(int action);
@@ -1123,6 +1124,7 @@ class CmdProxy {
     std::string TemperatureValues(int action);
     /* dacs */
     std::string Dac(int action);
+    std::string DacList(int action);
     std::string DacValues(int action);
     std::string ResetDacs(int action);
     std::string DefaultDac(int action);
@@ -1281,6 +1283,12 @@ class CmdProxy {
         "interfaces must be set to 2. slsReceiver and slsDetectorGui "
         "does not handle.");
 
+    INTEGER_COMMAND_VEC_ID_GET(
+        master, getMaster, setMaster, StringTo<int>,
+        "[0, 1]\n\t[Eiger] Sets half module to master and "
+        "others to slaves.\n\t[Gotthard][Gotthard2][Mythen3][Eiger] "
+        "Gets if the current module/ half module is master.");
+
     /* acquisition parameters */
 
     INTEGER_COMMAND_SET_NOID_GET_ID(
@@ -1328,7 +1336,7 @@ class CmdProxy {
         dr, getDynamicRange, setDynamicRange, StringTo<int>,
         "[value]\n\tDynamic Range or number of bits per "
         "pixel in detector.\n\t"
-        "[Eiger] Options: 4, 8, 16, 32. If set to 32, also sets "
+        "[Eiger] Options: 4, 8, 12, 16, 32. If set to 32, also sets "
         "clkdivider to 2, else to 0.\n\t"
         "[Mythen3] Options: 8, 16, 32\n\t"
         "[Jungfrau][Gotthard][Ctb][Moench][Mythen3][Gotthard2] 16");
@@ -1458,10 +1466,6 @@ class CmdProxy {
 
     /* dacs */
 
-    GET_COMMAND_NOID(
-        daclist, getDacList,
-        "\n\tGets the list of commands for every dac for this detector.");
-
     /* on chip dacs */
     INTEGER_USER_IND_COMMAND(
         vchip_comp_fe, getOnChipDAC, setOnChipDAC, StringTo<int>,
@@ -1533,11 +1537,15 @@ class CmdProxy {
                         "to IDLE or STOPPED. Goes to stop server.");
 
     GET_COMMAND(rx_framescaught, getFramesCaught,
-                "\n\tNumber of frames caught by receiver.");
+                "\n\tNumber of frames caught by each port in receiver.");
 
     GET_COMMAND(rx_missingpackets, getNumMissingPackets,
-                "\n\tNumber of missing packets for each port in receiver. "
-                "Negative number denotes extra packets.");
+                "\n\tNumber of missing packets for each port in receiver. If "
+                "negative, they are packets in excess. ");
+
+    GET_COMMAND(rx_frameindex, getRxCurrentFrameIndex,
+                "\n\tCurrent frame index received for each port in receiver "
+                "during acquisition.");
 
     INTEGER_COMMAND_VEC_ID(
         nextframenumber, getNextFrameNumber, setNextFrameNumber,
@@ -1901,6 +1909,10 @@ class CmdProxy {
         "start of acquisition. 0 complete reset, 1 partial reset. Default is "
         "complete reset. Advanced function!");
 
+    INTEGER_COMMAND_VEC_ID(
+        top, getTop, setTop, StringTo<int>,
+        "[0, 1]\n\t[Eiger] Sets half module to top (1), else bottom.");
+
     /* Jungfrau Specific */
 
     GET_COMMAND(chipversion, getChipVersion,
@@ -2251,10 +2263,6 @@ class CmdProxy {
                      "ns|us|ms|s]\n\t[Jungfrau][Mythen3][Gotthard2][Moench]["
                      "CTB] Timestamp at a frame start."
                      "\n\t[Gotthard2] not in burst and auto mode.");
-
-    GET_COMMAND(
-        rx_frameindex, getRxCurrentFrameIndex,
-        "\n\tCurrent frame index received in receiver during acquisition.");
 };
 
 } // namespace sls

slsDetectorSoftware/src/CtbConfig.cpp

@@ -0,0 +1,72 @@
+
+#include "CtbConfig.h"
+#include "SharedMemory.h"
+#include "sls/ToString.h"
+#include "sls/string_utils.h"
+
+#include <algorithm>
+#include <fstream>
+#include <sstream>
+
+namespace sls {
+
+CtbConfig::CtbConfig(){
+    for (size_t i=0; i!=num_dacs; ++i){
+        setDacName(i, "dac"+ToString(i));
+    }
+}
+
+void CtbConfig::check_index(size_t i) const {
+    if (!(i < num_dacs)) {
+        std::ostringstream oss;
+        oss << "DAC index is too large needs to be below " << num_dacs;
+        throw RuntimeError(oss.str());
+    }
+}
+
+void CtbConfig::check_size(const std::string &name) const {
+   
+    if (name.empty())
+        throw RuntimeError("Name needs to be at least one character");
+
+     // dacname_length -1 to account for \0 termination
+    if (!(name.size() < (name_length - 1))) {
+        std::ostringstream oss;
+        oss << "Length of name needs to be less than " << name_length - 1
+            << " chars";
+        throw RuntimeError(oss.str());
+    }
+}
+
+void CtbConfig::setDacName(size_t index, const std::string &name) {
+
+    check_index(index);
+    check_size(name);
+
+    char *dst = &dacnames[index * name_length];
+    memset(dst, '\0', name_length);
+    memcpy(dst, &name[0], name.size());
+}
+
+void CtbConfig::setDacNames(const std::vector<std::string>& names){
+    for (size_t i = 0; i!=num_dacs; ++i){
+        setDacName(i, names[i]);
+    }
+}
+
+std::string CtbConfig::getDacName(size_t index) const {
+    return dacnames + index * name_length;
+}
+
+std::vector<std::string> CtbConfig::getDacNames() const {
+    std::vector<std::string> names;
+    for (size_t i = 0; i != num_dacs; ++i)
+        names.push_back(getDacName(i));
+    return names;
+}
+
+const char* CtbConfig::shm_tag(){
+    return shm_tag_;
+}
+
+} // namespace sls

slsDetectorSoftware/src/CtbConfig.h

@@ -0,0 +1,31 @@
+#pragma once
+#include <string>
+#include <vector>
+namespace sls {
+
+
+class CtbConfig {
+    static constexpr size_t name_length = 20;
+    static constexpr size_t num_dacs = 18;
+    static constexpr const char* shm_tag_ = "ctbdacs";
+    char dacnames[name_length * num_dacs]{};
+
+    void check_index(size_t i) const;
+    void check_size(const std::string &name) const;
+
+  public:
+    CtbConfig();
+    CtbConfig(const CtbConfig&) = default;
+    CtbConfig(CtbConfig&&) = default;
+    CtbConfig& operator=(const CtbConfig&) = default;
+    ~CtbConfig() = default;
+
+    void setDacNames(const std::vector<std::string> &names);
+    void setDacName(size_t index, const std::string &name);
+    std::string getDacName(size_t index) const;
+    std::vector<std::string> getDacNames() const;
+    static const char* shm_tag();
+};
+
+
+} // namespace sls

slsDetectorSoftware/src/Detector.cpp

@@ -7,6 +7,7 @@
 #include "CmdProxy.h"
 #include "DetectorImpl.h"
 #include "Module.h"
+#include "CtbConfig.h"
 #include "sls/Pattern.h"
 #include "sls/container_utils.h"
 #include "sls/file_utils.h"
@@ -21,6 +22,7 @@
 namespace sls {
 
 void freeSharedMemory(int detectorIndex, int moduleIndex) {
+
     // single module
     if (moduleIndex >= 0) {
         SharedMemory<sharedModule> moduleShm(detectorIndex, moduleIndex);
@@ -44,6 +46,11 @@ void freeSharedMemory(int detectorIndex, int moduleIndex) {
         SharedMemory<sharedModule> moduleShm(detectorIndex, i);
         moduleShm.RemoveSharedMemory();
     }
+
+    // Ctb configuration
+    SharedMemory<CtbConfig> ctbShm(detectorIndex, -1, CtbConfig::shm_tag());
+    if (ctbShm.IsExisting())
+        ctbShm.RemoveSharedMemory();
 }
 
 using defs = slsDetectorDefs;
@@ -298,6 +305,23 @@ void Detector::setFlipRows(bool value, Positions pos) {
     pimpl->Parallel(&Module::setFlipRows, pos, value);
 }
 
+Result<bool> Detector::getMaster(Positions pos) const {
+    return pimpl->Parallel(&Module::isMaster, pos);
+}
+
+void Detector::setMaster(bool master, int pos) {
+    // multi mod, set slaves first
+    if (master && size() > 1) {
+        if (pos == -1) {
+            throw RuntimeError("Master can be set only to a single module");
+        }
+        pimpl->Parallel(&Module::setMaster, {}, false);
+        pimpl->Parallel(&Module::setMaster, {pos}, master);
+    } else {
+        pimpl->Parallel(&Module::setMaster, {pos}, master);
+    }
+}
+
 Result<bool> Detector::isVirtualDetectorServer(Positions pos) const {
     return pimpl->Parallel(&Module::isVirtualDetectorServer, pos);
 }
@@ -387,7 +411,7 @@ void Detector::setDynamicRange(int value) {
 std::vector<int> Detector::getDynamicRangeList() const {
     switch (getDetectorType().squash()) {
     case defs::EIGER:
-        return std::vector<int>{4, 8, 16, 32};
+        return std::vector<int>{4, 8, 12, 16, 32};
     case defs::MYTHEN3:
         return std::vector<int>{8, 16, 32};
     default:
@@ -783,6 +807,25 @@ void Detector::startDetectorReadout() {
 
 void Detector::stopDetector(Positions pos) {
     pimpl->Parallel(&Module::stopAcquisition, pos);
+
+    // validate consistent frame numbers
+    switch (getDetectorType().squash()) {
+    case defs::EIGER:
+    case defs::JUNGFRAU:
+    case defs::MOENCH:
+    case defs::CHIPTESTBOARD: {
+        auto res = getNextFrameNumber(pos);
+        if (!res.equal()) {
+            uint64_t maxVal = 0;
+            for (auto it : res) {
+                maxVal = std::max(maxVal, it);
+            }
+            setNextFrameNumber(maxVal + 1);
+        }
+    } break;
+    default:
+        break;
+    }
 }
 
 Result<defs::runStatus> Detector::getDetectorStatus(Positions pos) const {
@@ -793,7 +836,7 @@ Result<defs::runStatus> Detector::getReceiverStatus(Positions pos) const {
     return pimpl->Parallel(&Module::getReceiverStatus, pos);
 }
 
-Result<int64_t> Detector::getFramesCaught(Positions pos) const {
+Result<std::vector<int64_t>> Detector::getFramesCaught(Positions pos) const {
     return pimpl->Parallel(&Module::getFramesCaughtByReceiver, pos);
 }
 
@@ -802,6 +845,11 @@ Detector::getNumMissingPackets(Positions pos) const {
     return pimpl->Parallel(&Module::getNumMissingPackets, pos);
 }
 
+Result<std::vector<int64_t>>
+Detector::getRxCurrentFrameIndex(Positions pos) const {
+    return pimpl->Parallel(&Module::getReceiverCurrentFrameIndex, pos);
+}
+
 Result<uint64_t> Detector::getNextFrameNumber(Positions pos) const {
     return pimpl->Parallel(&Module::getNextFrameNumber, pos);
 }
@@ -835,7 +883,7 @@ Result<std::string> Detector::getScanErrorMessage(Positions pos) const {
 
 Result<int> Detector::getNumberofUDPInterfaces(Positions pos) const {
     // also called by vetostream (for gotthard2)
-    return pimpl->getNumberofUDPInterfaces(pos);
+    return pimpl->Parallel(&Module::getNumberofUDPInterfacesFromShm, pos);
 }
 
 void Detector::setNumberofUDPInterfaces(int n, Positions pos) {
@@ -1488,6 +1536,14 @@ void Detector::setDataStream(const defs::portPosition port, const bool enable,
     pimpl->Parallel(&Module::setDataStream, pos, port, enable);
 }
 
+Result<bool> Detector::getTop(Positions pos) const {
+    return pimpl->Parallel(&Module::getTop, pos);
+}
+
+void Detector::setTop(bool value, Positions pos) {
+    pimpl->Parallel(&Module::setTop, pos, value);
+}
+
 // Jungfrau Specific
 Result<double> Detector::getChipVersion(Positions pos) const {
     return pimpl->Parallel(&Module::getChipVersion, pos);
@@ -1563,7 +1619,6 @@ std::vector<defs::gainMode> Detector::getGainModeList() const {
         return std::vector<defs::gainMode>{
             defs::DYNAMIC, defs::FORCE_SWITCH_G1, defs::FORCE_SWITCH_G2,
             defs::FIX_G1,  defs::FIX_G2,          defs::FIX_G0};
-        break;
     default:
         throw RuntimeError("Gain mode is not implemented for this detector.");
     }
@@ -1696,7 +1751,7 @@ Result<defs::streamingInterface> Detector::getVetoStream(Positions pos) const {
     // 3gbe
     auto r3 = pimpl->Parallel(&Module::getVetoStream, pos);
     // 10gbe (debugging interface) opens 2nd udp interface in receiver
-    auto r10 = pimpl->getNumberofUDPInterfaces(pos);
+    auto r10 = getNumberofUDPInterfaces(pos);
 
     Result<defs::streamingInterface> res(r3.size());
     for (unsigned int i = 0; i < res.size(); ++i) {
@@ -1718,7 +1773,7 @@ void Detector::setVetoStream(defs::streamingInterface interface,
     pimpl->Parallel(&Module::setVetoStream, pos, LOW_LATENCY_LINK);
 
     // 10gbe (debugging interface) opens 2nd udp interface in receiver
-    int old_numinterfaces = pimpl->getNumberofUDPInterfaces(pos).tsquash(
+    int old_numinterfaces = getNumberofUDPInterfaces(pos).tsquash(
         "retrieved inconsistent number of udp interfaces");
     int numinterfaces =
         (((interface & defs::streamingInterface::ETHERNET_10GB) ==
@@ -1808,10 +1863,6 @@ Detector::getGateDelayForAllGates(Positions pos) const {
     return pimpl->Parallel(&Module::getGateDelayForAllGates, pos);
 }
 
-Result<bool> Detector::getMaster(Positions pos) const {
-    return pimpl->Parallel(&Module::isMaster, pos);
-}
-
 Result<int> Detector::getChipStatusRegister(Positions pos) const {
     return pimpl->Parallel(&Module::getChipStatusRegister, pos);
 }
@@ -2023,6 +2074,42 @@ void Detector::setLEDEnable(bool enable, Positions pos) {
     pimpl->Parallel(&Module::setLEDEnable, pos, enable);
 }
 
+void Detector::setDacNames(const std::vector<std::string> names) {
+    if (getDetectorType().squash() != defs::CHIPTESTBOARD)
+        throw RuntimeError("Named dacs only for CTB");
+    pimpl->setCtbDacNames(names);
+}
+
+std::vector<std::string> Detector::getDacNames() const {
+    std::vector<std::string> names;
+    auto type = getDetectorType().squash();
+    if (type == defs::CHIPTESTBOARD)
+        return pimpl->getCtbDacNames();
+
+    for (const auto &index : getDacList())
+        names.push_back(ToString(index));
+    return names;
+}
+
+defs::dacIndex Detector::getDacIndex(const std::string &name) {
+    auto type = getDetectorType().squash();
+    if (type == defs::CHIPTESTBOARD) {
+        auto names = getDacNames();
+        auto it = std::find(names.begin(), names.end(), name);
+        if (it == names.end())
+            throw RuntimeError("Dacname not found");
+        return static_cast<defs::dacIndex>(it - names.begin());
+    }
+    return StringTo<defs::dacIndex>(name);
+}
+
+std::string Detector::getDacName(defs::dacIndex i) {
+    auto type = getDetectorType().squash();
+    if (type == defs::CHIPTESTBOARD)
+        return pimpl->getCtbDacName(i);
+    return ToString(i);
+}
+
 // Pattern
 
 void Detector::setPattern(const std::string &fname, Positions pos) {
@@ -2143,10 +2230,11 @@ void Detector::setAdditionalJsonParameter(const std::string &key,
 
 // Advanced
 
-void Detector::programFPGA(const std::string &fname, Positions pos) {
+void Detector::programFPGA(const std::string &fname,
+                           const bool forceDeleteNormalFile, Positions pos) {
     LOG(logINFO) << "Updating Firmware...";
     std::vector<char> buffer = pimpl->readProgrammingFile(fname);
-    pimpl->Parallel(&Module::programFPGA, pos, buffer);
+    pimpl->Parallel(&Module::programFPGA, pos, buffer, forceDeleteNormalFile);
     rebootController(pos);
 }
 
@@ -2191,7 +2279,7 @@ void Detector::updateFirmwareAndServer(const std::string &sname,
     LOG(logINFO) << "Updating Firmware and Detector Server (with tftp)...";
     LOG(logINFO) << "Updating Detector Server (via tftp)...";
     pimpl->Parallel(&Module::copyDetectorServer, pos, sname, hostname);
-    programFPGA(fname, pos);
+    programFPGA(fname, false, pos);
 }
 
 void Detector::updateFirmwareAndServer(const std::string &sname,
@@ -2202,7 +2290,7 @@ void Detector::updateFirmwareAndServer(const std::string &sname,
     std::vector<char> buffer = readBinaryFile(sname, "Update Detector Server");
     std::string filename = sls::getFileNameFromFilePath(sname);
     pimpl->Parallel(&Module::updateDetectorServer, pos, buffer, filename);
-    programFPGA(fname, pos);
+    programFPGA(fname, false, pos);
 }
 
 Result<bool> Detector::getUpdateMode(Positions pos) const {
@@ -2311,12 +2399,8 @@ Result<ns> Detector::getMeasurementTime(Positions pos) const {
 
 std::string Detector::getUserDetails() const { return pimpl->getUserDetails(); }
 
-Result<uint64_t> Detector::getRxCurrentFrameIndex(Positions pos) const {
-    return pimpl->Parallel(&Module::getReceiverCurrentFrameIndex, pos);
-}
-
 std::vector<int> Detector::getPortNumbers(int start_port) {
-    int num_sockets_per_detector = pimpl->getNumberofUDPInterfaces({}).tsquash(
+    int num_sockets_per_detector = getNumberofUDPInterfaces({}).tsquash(
         "Number of UDP Interfaces is not consistent among modules");
     std::vector<int> res;
     res.reserve(size());

slsDetectorSoftware/src/DetectorImpl.cpp

@@ -32,7 +32,8 @@
 namespace sls {
 
 DetectorImpl::DetectorImpl(int detector_index, bool verify, bool update)
-    : detectorIndex(detector_index), shm(detector_index, -1) {
+    : detectorIndex(detector_index), shm(detector_index, -1),
+      ctb_shm(detector_index, -1, CtbConfig::shm_tag()) {
     setupDetector(verify, update);
 }
 
@@ -44,6 +45,9 @@ void DetectorImpl::setupDetector(bool verify, bool update) {
     if (update) {
         updateUserdetails();
     }
+
+    if (ctb_shm.IsExisting())
+        ctb_shm.OpenSharedMemory();
 }
 
 void DetectorImpl::setAcquiringFlag(bool flag) { shm()->acquiringFlag = flag; }
@@ -74,6 +78,10 @@ void DetectorImpl::freeSharedMemory(int detectorIndex, int detPos) {
         SharedMemory<sharedModule> moduleShm(detectorIndex, i);
         moduleShm.RemoveSharedMemory();
     }
+
+    SharedMemory<CtbConfig> ctbShm(detectorIndex, -1, CtbConfig::shm_tag());
+    if (ctbShm.IsExisting())
+        ctbShm.RemoveSharedMemory();
 }
 
 void DetectorImpl::freeSharedMemory() {
@@ -86,6 +94,9 @@ void DetectorImpl::freeSharedMemory() {
     // clear detector shm
     shm.RemoveSharedMemory();
     client_downstream = false;
+
+    if (ctb_shm.IsExisting())
+        ctb_shm.RemoveSharedMemory();
 }
 
 std::string DetectorImpl::getUserDetails() {
@@ -246,13 +257,14 @@ void DetectorImpl::setHostname(const std::vector<std::string> &name) {
     }
     updateDetectorSize();
 
-    // update zmq port (especially for eiger)
-    int numInterfaces = modules[0]->getNumberofUDPInterfaces();
-    if (numInterfaces == 2) {
-        for (size_t i = 0; i < modules.size(); ++i) {
-            modules[i]->setClientStreamingPort(DEFAULT_ZMQ_CL_PORTNO +
-                                               i * numInterfaces);
-        }
+    // Here we know the detector type and can add ctb shared memory
+    // if needed, CTB dac names are only on detector level
+
+    if (shm()->detType == defs::CHIPTESTBOARD) {
+        if (ctb_shm.IsExisting())
+            ctb_shm.OpenSharedMemory();
+        else
+            ctb_shm.CreateSharedMemory();
     }
 }
 
@@ -281,6 +293,13 @@ void DetectorImpl::addModule(const std::string &hostname) {
 
     // get type by connecting
     detectorType type = Module::getTypeFromDetector(host, port);
+
+    // gotthard cannot have more than 2 modules (50um=1, 25um=2
+    if ((type == GOTTHARD || type == GOTTHARD2) && modules.size() > 2) {
+        freeSharedMemory();
+        throw sls::RuntimeError("Gotthard cannot have more than 2 modules");
+    }
+
     auto pos = modules.size();
     modules.emplace_back(
         sls::make_unique<Module>(type, detectorIndex, pos, false));
@@ -288,11 +307,20 @@ void DetectorImpl::addModule(const std::string &hostname) {
     modules[pos]->setControlPort(port);
     modules[pos]->setStopPort(port + 1);
     modules[pos]->setHostname(host, shm()->initialChecks);
+
     // module type updated by now
     shm()->detType = Parallel(&Module::getDetectorType, {})
                          .tsquash("Inconsistent detector types.");
     // for moench and ctb
     modules[pos]->updateNumberOfChannels();
+
+    // for eiger, jungfrau, gotthard2
+    modules[pos]->updateNumberofUDPInterfaces();
+
+    // update zmq port in case numudpinterfaces changed
+    int numInterfaces = modules[pos]->getNumberofUDPInterfacesFromShm();
+    modules[pos]->setClientStreamingPort(DEFAULT_ZMQ_CL_PORTNO +
+                                         pos * numInterfaces);
 }
 
 void DetectorImpl::updateDetectorSize() {
@@ -1142,7 +1170,7 @@ int DetectorImpl::acquire() {
         if (acquisition_finished != nullptr) {
             int status = Parallel(&Module::getRunStatus, {}).squash(ERROR);
             auto a = Parallel(&Module::getReceiverProgress, {});
-            double progress = (*std::min_element(a.begin(), a.end()));
+            double progress = (*std::max_element(a.begin(), a.end()));
             acquisition_finished(progress, status, acqFinished_p);
         }
 
@@ -1361,10 +1389,6 @@ std::vector<char> DetectorImpl::readProgrammingFile(const std::string &fname) {
     return buffer;
 }
 
-sls::Result<int> DetectorImpl::getNumberofUDPInterfaces(Positions pos) const {
-    return Parallel(&Module::getNumberofUDPInterfaces, pos);
-}
-
 sls::Result<int> DetectorImpl::getDefaultDac(defs::dacIndex index,
                                              defs::detectorSettings sett,
                                              Positions pos) {
@@ -1376,4 +1400,16 @@ void DetectorImpl::setDefaultDac(defs::dacIndex index, int defaultValue,
     Parallel(&Module::setDefaultDac, pos, index, defaultValue, sett);
 }
 
+std::vector<std::string> DetectorImpl::getCtbDacNames() const {
+    return ctb_shm()->getDacNames();
+}
+
+void DetectorImpl::setCtbDacNames(const std::vector<std::string> &names) {
+    ctb_shm()->setDacNames(names);
+}
+
+std::string DetectorImpl::getCtbDacName(defs::dacIndex i) const {
+    return ctb_shm()->getDacName(static_cast<int>(i));
+}
+
 } // namespace sls

slsDetectorSoftware/src/DetectorImpl.h

@@ -7,6 +7,8 @@
 #include "sls/logger.h"
 #include "sls/sls_detector_defs.h"
 
+
+#include "CtbConfig.h"
 class ZmqSocket;
 class detectorData;
 
@@ -291,7 +293,6 @@ class DetectorImpl : public virtual slsDetectorDefs {
      */
     std::vector<char> readProgrammingFile(const std::string &fname);
 
-    sls::Result<int> getNumberofUDPInterfaces(Positions pos) const;
     void setNumberofUDPInterfaces(int n, Positions pos);
     sls::Result<int> getDefaultDac(defs::dacIndex index,
                                    defs::detectorSettings sett,
@@ -299,6 +300,11 @@ class DetectorImpl : public virtual slsDetectorDefs {
     void setDefaultDac(defs::dacIndex index, int defaultValue,
                        defs::detectorSettings sett, Positions pos);
 
+
+    std::vector<std::string> getCtbDacNames() const;
+    std::string getCtbDacName(defs::dacIndex i) const;
+    void setCtbDacNames(const std::vector<std::string>& names);
+
   private:
     /**
      * Creates/open shared memory, initializes detector structure and members
@@ -382,6 +388,7 @@ class DetectorImpl : public virtual slsDetectorDefs {
 
     const int detectorIndex{0};
     sls::SharedMemory<sharedDetector> shm{0, -1};
+    sls::SharedMemory<CtbConfig> ctb_shm{0, -1, CtbConfig::shm_tag()};
     std::vector<std::unique_ptr<sls::Module>> modules;
 
     /** data streaming (down stream) enabled in client (zmq sckets created) */

slsDetectorSoftware/src/Module.cpp

@@ -509,6 +509,13 @@ void Module::setFlipRows(bool value) {
     }
 }
 
+bool Module::isMaster() const { return sendToDetectorStop<int>(F_GET_MASTER); }
+
+void Module::setMaster(const bool master) {
+    sendToDetector(F_SET_MASTER, static_cast<int>(master), nullptr);
+    sendToDetectorStop(F_SET_MASTER, static_cast<int>(master), nullptr);
+}
+
 bool Module::isVirtualDetectorServer() const {
     return sendToDetector<int>(F_IS_VIRTUAL);
 }
@@ -866,8 +873,26 @@ double Module::getReceiverProgress() const {
     return sendToReceiver<double>(F_GET_RECEIVER_PROGRESS);
 }
 
-int64_t Module::getFramesCaughtByReceiver() const {
-    return sendToReceiver<int64_t>(F_GET_RECEIVER_FRAMES_CAUGHT);
+std::vector<int64_t> Module::getFramesCaughtByReceiver() const {
+    // TODO!(Erik) Refactor
+    LOG(logDEBUG1) << "Getting frames caught";
+    if (shm()->useReceiverFlag) {
+        auto client = ReceiverSocket(shm()->rxHostname, shm()->rxTCPPort);
+        client.Send(F_GET_RECEIVER_FRAMES_CAUGHT);
+        if (client.Receive<int>() == FAIL) {
+            throw ReceiverError(
+                "Receiver " + std::to_string(moduleIndex) +
+                " returned error: " + client.readErrorMessage());
+        } else {
+            auto nports = client.Receive<int>();
+            std::vector<int64_t> retval(nports);
+            client.Receive(retval);
+            LOG(logDEBUG1) << "Frames caught of Receiver" << moduleIndex << ": "
+                           << sls::ToString(retval);
+            return retval;
+        }
+    }
+    throw RuntimeError("No receiver to get frames caught.");
 }
 
 std::vector<int64_t> Module::getNumMissingPackets() const {
@@ -892,6 +917,28 @@ std::vector<int64_t> Module::getNumMissingPackets() const {
     throw RuntimeError("No receiver to get missing packets.");
 }
 
+std::vector<int64_t> Module::getReceiverCurrentFrameIndex() const {
+    // TODO!(Erik) Refactor
+    LOG(logDEBUG1) << "Getting frame index";
+    if (shm()->useReceiverFlag) {
+        auto client = ReceiverSocket(shm()->rxHostname, shm()->rxTCPPort);
+        client.Send(F_GET_RECEIVER_FRAME_INDEX);
+        if (client.Receive<int>() == FAIL) {
+            throw ReceiverError(
+                "Receiver " + std::to_string(moduleIndex) +
+                " returned error: " + client.readErrorMessage());
+        } else {
+            auto nports = client.Receive<int>();
+            std::vector<int64_t> retval(nports);
+            client.Receive(retval);
+            LOG(logDEBUG1) << "Frame index of Receiver" << moduleIndex << ": "
+                           << sls::ToString(retval);
+            return retval;
+        }
+    }
+    throw RuntimeError("No receiver to get frame index.");
+}
+
 uint64_t Module::getNextFrameNumber() const {
     return sendToDetector<uint64_t>(F_GET_NEXT_FRAME_NUMBER);
 }
@@ -929,9 +976,8 @@ int Module::getNumberofUDPInterfacesFromShm() const {
     return shm()->numUDPInterfaces;
 }
 
-int Module::getNumberofUDPInterfaces() const {
+void Module::updateNumberofUDPInterfaces() {
     shm()->numUDPInterfaces = sendToDetector<int>(F_GET_NUM_INTERFACES);
-    return shm()->numUDPInterfaces;
 }
 
 void Module::setNumberofUDPInterfaces(int n) {
@@ -1139,7 +1185,7 @@ std::string Module::printReceiverConfiguration() {
        << getReceiverHostname();
 
     if (shm()->detType == JUNGFRAU) {
-        os << "\nNumber of Interfaces:\t" << getNumberofUDPInterfaces()
+        os << "\nNumber of Interfaces:\t" << getNumberofUDPInterfacesFromShm()
            << "\nSelected Interface:\t" << getSelectedUDPInterface();
     }
 
@@ -1673,6 +1719,14 @@ void Module::setDataStream(const portPosition port, const bool enable) {
     }
 }
 
+bool Module::getTop() const {
+    return (static_cast<bool>(sendToDetector<int>(F_GET_TOP)));
+}
+
+void Module::setTop(bool value) {
+    sendToDetector(F_SET_TOP, static_cast<int>(value), nullptr);
+}
+
 // Jungfrau Specific
 double Module::getChipVersion() const {
     return (sendToDetector<int>(F_GET_CHIP_VERSION)) / 10.00;
@@ -2197,8 +2251,6 @@ std::array<time::ns, 3> Module::getGateDelayForAllGates() const {
     return sendToDetector<std::array<time::ns, 3>>(F_GET_GATE_DELAY_ALL_GATES);
 }
 
-bool Module::isMaster() const { return sendToDetectorStop<int>(F_GET_MASTER); }
-
 int Module::getChipStatusRegister() const {
     return sendToDetector<int>(F_GET_CSR);
 }
@@ -2538,12 +2590,14 @@ void Module::setAdditionalJsonParameter(const std::string &key,
 }
 
 // Advanced
-void Module::programFPGA(std::vector<char> buffer) {
+void Module::programFPGA(std::vector<char> buffer,
+                         const bool forceDeleteNormalFile) {
     switch (shm()->detType) {
     case JUNGFRAU:
     case CHIPTESTBOARD:
     case MOENCH:
-        sendProgram(true, buffer, F_PROGRAM_FPGA, "Update Firmware");
+        sendProgram(true, buffer, F_PROGRAM_FPGA, "Update Firmware", "",
+                    forceDeleteNormalFile);
         break;
     case MYTHEN3:
     case GOTTHARD2:
@@ -2743,10 +2797,6 @@ int64_t Module::getMeasurementTime() const {
     return sendToDetectorStop<int64_t>(F_GET_MEASUREMENT_TIME);
 }
 
-uint64_t Module::getReceiverCurrentFrameIndex() const {
-    return sendToReceiver<uint64_t>(F_GET_RECEIVER_FRAME_INDEX);
-}
-
 // private
 
 void Module::checkArgs(const void *args, size_t args_size, void *retval,
@@ -3170,10 +3220,10 @@ void Module::initializeModuleStructure(detectorType type) {
     sls::strcpy_safe(shm()->rxHostname, "none");
     shm()->rxTCPPort = DEFAULT_PORTNO + 2;
     shm()->useReceiverFlag = false;
+    shm()->numUDPInterfaces = 1;
     shm()->zmqport =
         DEFAULT_ZMQ_CL_PORTNO + moduleIndex * shm()->numUDPInterfaces;
     shm()->zmqip = IpAddr{};
-    shm()->numUDPInterfaces = 1;
     shm()->stoppedFlag = false;
 
     // get the Module parameters based on type
@@ -3534,7 +3584,8 @@ sls_detector_module Module::readSettingsFile(const std::string &fname,
 void Module::sendProgram(bool blackfin, std::vector<char> buffer,
                          const int functionEnum,
                          const std::string &functionType,
-                         const std::string serverName) {
+                         const std::string serverName,
+                         const bool forceDeleteNormalFile) {
     LOG(logINFO) << "Module " << moduleIndex << " (" << shm()->hostname
                  << "): Sending " << functionType;
 
@@ -3558,6 +3609,11 @@ void Module::sendProgram(bool blackfin, std::vector<char> buffer,
         client.Send(sname);
     }
 
+    // send forceDeleteNormalFile flag
+    if (blackfin) {
+        client.Send(static_cast<int>(forceDeleteNormalFile));
+    }
+
     // validate memory allocation etc in detector
     if (client.Receive<int>() == FAIL) {
         std::ostringstream os;

slsDetectorSoftware/src/Module.h

@@ -120,6 +120,9 @@ class Module : public virtual slsDetectorDefs {
     int setTrimEn(const std::vector<int> &energies = {});
     bool getFlipRows() const;
     void setFlipRows(bool value);
+    bool isMaster() const;
+    void setMaster(const bool master);
+
     bool isVirtualDetectorServer() const;
 
     /**************************************************
@@ -184,6 +187,7 @@ class Module : public virtual slsDetectorDefs {
     void setDBITPipeline(int value);
     int getReadNRows() const;
     void setReadNRows(const int value);
+
     /**************************************************
      *                                                *
      *    Acquisition                                 *
@@ -199,8 +203,9 @@ class Module : public virtual slsDetectorDefs {
     runStatus getRunStatus() const;
     runStatus getReceiverStatus() const;
     double getReceiverProgress() const;
-    int64_t getFramesCaughtByReceiver() const;
+    std::vector<int64_t> getFramesCaughtByReceiver() const;
     std::vector<int64_t> getNumMissingPackets() const;
+    std::vector<int64_t> getReceiverCurrentFrameIndex() const;
     uint64_t getNextFrameNumber() const;
     void setNextFrameNumber(uint64_t value);
     void sendSoftwareTrigger(const bool block);
@@ -214,7 +219,7 @@ class Module : public virtual slsDetectorDefs {
      *                                                 *
      * ************************************************/
     int getNumberofUDPInterfacesFromShm() const;
-    int getNumberofUDPInterfaces() const;
+    void updateNumberofUDPInterfaces();
     void setNumberofUDPInterfaces(int n);
     int getSelectedUDPInterface() const;
     void selectUDPInterface(int n);
@@ -365,6 +370,8 @@ class Module : public virtual slsDetectorDefs {
     void setQuad(const bool enable);
     bool getDataStream(const portPosition port) const;
     void setDataStream(const portPosition port, const bool enable);
+    bool getTop() const;
+    void setTop(bool value);
 
     /**************************************************
      *                                                *
@@ -456,7 +463,6 @@ class Module : public virtual slsDetectorDefs {
     int64_t getGateDelay(int gateIndex) const;
     void setGateDelay(int gateIndex, int64_t value);
     std::array<time::ns, 3> getGateDelayForAllGates() const;
-    bool isMaster() const;
     int getChipStatusRegister() const;
     void setGainCaps(int caps);
     int getGainCaps();
@@ -539,7 +545,8 @@ class Module : public virtual slsDetectorDefs {
      *    Advanced                                    *
      *                                                *
      * ************************************************/
-    void programFPGA(std::vector<char> buffer);
+    void programFPGA(std::vector<char> buffer,
+                     const bool forceDeleteNormalFile);
     void resetFPGA();
     void copyDetectorServer(const std::string &fname,
                             const std::string &hostname);
@@ -576,7 +583,6 @@ class Module : public virtual slsDetectorDefs {
     int64_t getNumberOfFramesFromStart() const;
     int64_t getActualTime() const;
     int64_t getMeasurementTime() const;
-    uint64_t getReceiverCurrentFrameIndex() const;
 
   private:
     void checkArgs(const void *args, size_t args_size, void *retval,
@@ -755,7 +761,8 @@ class Module : public virtual slsDetectorDefs {
                                          bool trimbits = true);
     void sendProgram(bool blackfin, std::vector<char> buffer,
                      const int functionEnum, const std::string &functionType,
-                     const std::string serverName = "");
+                     const std::string serverName = "",
+                     const bool forceDeleteNormalFile = false);
     void simulatingActivityinDetector(const std::string &functionType,
                                       const int timeRequired);
 

slsDetectorSoftware/src/SharedMemory.h

@@ -19,7 +19,6 @@
 #include <fcntl.h> // O_CREAT, O_TRUNC..
 #include <iostream>
 #include <sstream>
-// #include <stdio.h>    // printf
 #include <sys/mman.h> // shared memory
 #include <sys/stat.h> // fstat
 #include <unistd.h>
@@ -36,11 +35,9 @@ namespace sls {
 template <typename T> class SharedMemory {
 
   public:
-    /**
-     * moduleid of -1 creates a detector only shared memory
-     */
-    SharedMemory(int detectorId, int moduleIndex) {
-        name = ConstructSharedMemoryName(detectorId, moduleIndex);
+    //moduleid of -1 creates a detector only shared memory
+    SharedMemory(int detectorId, int moduleIndex, const std::string& tag = "") {
+        name = ConstructSharedMemoryName(detectorId, moduleIndex, tag);
     }
 
     /**
@@ -103,11 +100,7 @@ template <typename T> class SharedMemory {
         return ret;
     }
 
-    /**
-     * Get shared memory name
-     */
     std::string GetName() const { return name; }
-
     size_t size() const { return shmSize; }
 
     /**
@@ -133,8 +126,8 @@ template <typename T> class SharedMemory {
             RemoveSharedMemory();
             throw SharedMemoryError(msg);
         }
-
         shared_struct = MapSharedMemory();
+        new (shared_struct) T{}; 
         LOG(logINFO) << "Shared memory created " << name;
     }
 
@@ -211,7 +204,7 @@ template <typename T> class SharedMemory {
      * @param moduleIndex module id, -1 if a detector shared memory
      * @returns shared memory name
      */
-    std::string ConstructSharedMemoryName(int detectorId, int moduleIndex) {
+    std::string ConstructSharedMemoryName(int detectorId, int moduleIndex, const std::string& tag) {
 
         // using environment path
         std::string sEnvPath;
@@ -222,8 +215,12 @@ template <typename T> class SharedMemory {
         }
 
         std::stringstream ss;
-        if (moduleIndex < 0)
+        if (moduleIndex < 0){
             ss << SHM_DETECTOR_PREFIX << detectorId << sEnvPath;
+            if (!tag.empty())
+                ss << "_" << tag;
+        }
+            
         else
             ss << SHM_DETECTOR_PREFIX << detectorId << SHM_MODULE_PREFIX
                << moduleIndex << sEnvPath;
@@ -293,15 +290,10 @@ template <typename T> class SharedMemory {
         return 0;
     }
 
-    /** Shared memory name */
+
     std::string name;
-
-    /** File descriptor */
     int fd{-1};
-
-    /** shm size */
     size_t shmSize{0};
-
     T *shared_struct{nullptr};
 };
 

slsDetectorSoftware/tests/CMakeLists.txt

@@ -18,6 +18,7 @@ target_sources(tests PRIVATE
     ${CMAKE_CURRENT_SOURCE_DIR}/test-CmdParser.cpp
     ${CMAKE_CURRENT_SOURCE_DIR}/test-Module.cpp
     ${CMAKE_CURRENT_SOURCE_DIR}/test-Pattern.cpp
+    ${CMAKE_CURRENT_SOURCE_DIR}/test-CtbConfig.cpp
 )
 
 target_include_directories(tests PUBLIC "$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/../src>")

slsDetectorSoftware/tests/test-CmdProxy-eiger.cpp

@@ -629,4 +629,32 @@ TEST_CASE("datastream", "[.cmd]") {
         REQUIRE_THROWS(proxy.Call("datastream", {"1"}, -1, PUT));
         REQUIRE_THROWS(proxy.Call("datastream", {"left", "1"}, -1, PUT));
     }
+}
+
+TEST_CASE("top", "[.cmd]") {
+    Detector det;
+    CmdProxy proxy(&det);
+    auto det_type = det.getDetectorType().squash();
+    if (det_type == defs::EIGER) {
+        auto prev_val = det.getTop();
+        int numModulesTested = 1;
+        if (det.size() > 1) {
+            numModulesTested = 2;
+        }
+        for (int i = 0; i != numModulesTested; ++i) {
+            std::ostringstream oss1, oss2, oss3;
+            proxy.Call("top", {"1"}, i, PUT, oss1);
+            REQUIRE(oss1.str() == "top 1\n");
+            proxy.Call("top", {}, i, GET, oss2);
+            REQUIRE(oss2.str() == "top 1\n");
+            proxy.Call("top", {"0"}, i, PUT, oss3);
+            REQUIRE(oss3.str() == "top 0\n");
+        }
+        for (int i = 0; i != det.size(); ++i) {
+            det.setTop(prev_val[i], {i});
+        }
+    } else {
+        REQUIRE_THROWS(proxy.Call("top", {}, -1, GET));
+        REQUIRE_THROWS(proxy.Call("top", {"1"}, -1, PUT));
+    }
 }

slsDetectorSoftware/tests/test-CmdProxy-rx.cpp

@@ -93,13 +93,19 @@ TEST_CASE("rx_framescaught", "[.cmd][.rx]") {
     CmdProxy proxy(&det);
 
     // This ensures 0 caught frames
+    auto prev_val = det.getFileWrite();
     det.setFileWrite(false); // avoid writing or error on file creation
     det.startReceiver();
     det.stopReceiver();
     {
         std::ostringstream oss;
         proxy.Call("rx_framescaught", {}, -1, GET, oss);
-        REQUIRE(oss.str() == "rx_framescaught 0\n");
+        if (det.getNumberofUDPInterfaces().tsquash(
+                "inconsistent number of interfaces") == 1) {
+            REQUIRE(oss.str() == "rx_framescaught [0]\n");
+        } else {
+            REQUIRE(oss.str() == "rx_framescaught [0, 0]\n");
+        }
     }
 
     // Currently disabled may activate if we have a stable env
@@ -111,10 +117,15 @@ TEST_CASE("rx_framescaught", "[.cmd][.rx]") {
     //     proxy.Call("rx_framescaught", {}, -1, GET, oss);
     //     REQUIRE(oss.str() == "rx_framescaught 1\n");
     // }
+
+    for (int i = 0; i != det.size(); ++i) {
+        det.setFileWrite(prev_val[i], {i});
+    }
 }
 
 TEST_CASE("rx_missingpackets", "[.cmd][.rx]") {
     Detector det;
+    auto prev_val = det.getFileWrite();
     det.setFileWrite(false); // avoid writing or error on file creation
     CmdProxy proxy(&det);
     {
@@ -123,8 +134,12 @@ TEST_CASE("rx_missingpackets", "[.cmd][.rx]") {
         det.stopReceiver();
         std::ostringstream oss;
         proxy.Call("rx_missingpackets", {}, -1, GET, oss);
-        std::string s = (oss.str()).erase(0, strlen("rx_missingpackets ["));
-        REQUIRE(std::stoi(s) > 0);
+        if (det.getNumberofUDPInterfaces().tsquash(
+                "inconsistent number of interfaces") == 1) {
+            REQUIRE(oss.str() != "rx_missingpackets [0]\n");
+        } else {
+            REQUIRE(oss.str() != "rx_missingpackets [0, 0]\n");
+        }
     }
     {
         // 0 missing packets (takes into account that acquisition is stopped)
@@ -133,9 +148,25 @@ TEST_CASE("rx_missingpackets", "[.cmd][.rx]") {
         det.stopReceiver();
         std::ostringstream oss;
         proxy.Call("rx_missingpackets", {}, -1, GET, oss);
-        std::string s = (oss.str()).erase(0, strlen("rx_missingpackets ["));
-        REQUIRE(std::stoi(s) == 0);
+        if (det.getNumberofUDPInterfaces().tsquash(
+                "inconsistent number of interfaces") == 1) {
+            REQUIRE(oss.str() == "rx_missingpackets [0]\n");
+        } else {
+            REQUIRE(oss.str() == "rx_missingpackets [0, 0]\n");
+        }
     }
+    for (int i = 0; i != det.size(); ++i) {
+        det.setFileWrite(prev_val[i], {i});
+    }
+}
+
+TEST_CASE("rx_frameindex", "[.cmd][.rx]") {
+    Detector det;
+    CmdProxy proxy(&det);
+    proxy.Call("rx_frameindex", {}, -1, GET);
+
+    // This is a get only command
+    REQUIRE_THROWS(proxy.Call("rx_frameindex", {"2"}, -1, PUT));
 }
 
 /* Network Configuration (Detector<->Receiver) */
@@ -884,16 +915,3 @@ TEST_CASE("rx_jsonpara", "[.cmd][.rx]") {
 }
 
 /* Insignificant */
-
-TEST_CASE("rx_frameindex", "[.cmd][.rx]") {
-    Detector det;
-    CmdProxy proxy(&det);
-    proxy.Call("rx_frameindex", {}, -1, GET);
-
-    // This is a get only command
-    REQUIRE_THROWS(proxy.Call("rx_frameindex", {"2"}, -1, PUT));
-    std::ostringstream oss;
-    proxy.Call("rx_frameindex", {}, 0, GET, oss);
-    std::string s = (oss.str()).erase(0, strlen("rx_frameindex "));
-    REQUIRE(std::stoi(s) >= 0);
-}

slsDetectorSoftware/tests/test-CmdProxy.cpp

@@ -570,6 +570,46 @@ TEST_CASE("fliprows", "[.cmd]") {
     }
 }
 
+TEST_CASE("master", "[.cmd]") {
+    Detector det;
+    CmdProxy proxy(&det);
+    auto det_type = det.getDetectorType().squash();
+    if (det_type == defs::EIGER || det_type == defs::MYTHEN3 || det_type == defs::GOTTHARD || det_type == defs::GOTTHARD2) {
+        REQUIRE_NOTHROW(proxy.Call("master", {}, -1, GET));
+        if (det_type == defs::EIGER) {
+            // get previous master
+            int prevMaster = 0;
+            {
+                auto previous = det.getMaster();
+                for (int i = 0; i != det.size(); ++i) {
+                    if (previous[i] == 1) {
+                        prevMaster = i;
+                        break;
+                    }
+                }
+            }
+            {
+                std::ostringstream oss1;
+                proxy.Call("master", {"0"}, 0, PUT, oss1);
+                REQUIRE(oss1.str() == "master 0\n");
+            }
+            {
+                std::ostringstream oss1;
+                proxy.Call("master", {"1"}, 0, PUT, oss1);
+                REQUIRE(oss1.str() == "master 1\n");
+            }
+            REQUIRE_THROWS(proxy.Call("master", {"1"}, -1, PUT));
+            // set all to slaves, and then master
+            for (int i = 0; i != det.size(); ++i) {
+                det.setMaster(0, {i});
+            }
+            det.setMaster(1, prevMaster);
+        }
+    } else {
+        REQUIRE_THROWS(proxy.Call("master", {}, -1, GET));
+    }
+}
+
 /* acquisition parameters */
 
 // acquire: not testing
@@ -2126,6 +2166,41 @@ TEST_CASE("nextframenumber", "[.cmd]") {
             proxy.Call("nextframenumber", {"1"}, -1, PUT, oss);
             REQUIRE(oss.str() == "nextframenumber 1\n");
         }
+
+        auto prev_timing =
+            det.getTimingMode().tsquash("inconsistent timing mode in test");
+        auto prev_frames =
+            det.getNumberOfFrames().tsquash("inconsistent #frames in test");
+        auto prev_exptime =
+            det.getExptime().tsquash("inconsistent exptime in test");
+        auto prev_period =
+            det.getPeriod().tsquash("inconsistent period in test");
+        det.setTimingMode(defs::AUTO_TIMING);
+        det.setNumberOfFrames(1);
+        det.setExptime(std::chrono::microseconds(200));
+        det.setPeriod(std::chrono::milliseconds(1));
+        det.startDetector();
+        std::this_thread::sleep_for(std::chrono::seconds(2));
+        auto currentfnum =
+            det.getNextFrameNumber().tsquash("inconsistent frame nr in test");
+        REQUIRE(currentfnum == 2);
+        if (det_type == defs::EIGER) {
+            auto prev_tengiga =
+                det.getTenGiga().tsquash("inconsistent ten giga enable");
+            det.setTenGiga(true);
+            det.setNextFrameNumber(1);
+            det.startDetector();
+            std::this_thread::sleep_for(std::chrono::seconds(2));
+            auto currentfnum = det.getNextFrameNumber().tsquash(
+                "inconsistent frame nr in test");
+            REQUIRE(currentfnum == 2);
+            det.setTenGiga(prev_tengiga);
+        }
+
+        det.setTimingMode(prev_timing);
+        det.setNumberOfFrames(prev_frames);
+        det.setExptime(prev_exptime);
+        det.setPeriod(prev_period);
         for (int i = 0; i != det.size(); ++i) {
             det.setNextFrameNumber(prev_sfnum[i], {i});
         }

slsDetectorSoftware/tests/test-CtbConfig.cpp

@@ -0,0 +1,59 @@
+#include "catch.hpp"
+#include <string>
+
+#include <stdlib.h>
+
+#include "SharedMemory.h"
+#include "CtbConfig.h"
+using namespace sls;
+#include <fstream>
+
+
+TEST_CASE("Default construction"){
+    static_assert(sizeof(CtbConfig) == 360); // 18*20 
+
+    CtbConfig c;
+    auto names = c.getDacNames();
+    REQUIRE(names.size() == 18);
+    REQUIRE(names[0] == "dac0");
+    REQUIRE(names[1] == "dac1");
+    REQUIRE(names[2] == "dac2");
+    REQUIRE(names[3] == "dac3");
+}
+
+TEST_CASE("Set and get a single dac name"){
+    CtbConfig c;
+    c.setDacName(3, "vrf");
+    auto names = c.getDacNames();
+
+    REQUIRE(c.getDacName(3) == "vrf");
+    REQUIRE(names[3] == "vrf");
+}
+
+TEST_CASE("Set a name that is too large throws"){
+    CtbConfig c;
+    REQUIRE_THROWS(c.setDacName(3, "somestringthatisreallytolongforadatac"));
+}
+
+TEST_CASE("Length of dac name cannot be 0"){
+    CtbConfig c;
+    REQUIRE_THROWS(c.setDacName(1, ""));
+}
+
+TEST_CASE("Copy a CTB config"){
+    CtbConfig c1;
+    c1.setDacName(5, "somename");
+
+    auto c2 = c1;
+    //change the name on the first object 
+    //to detecto shallow copy
+    c1.setDacName(5, "someothername");
+    REQUIRE(c2.getDacName(5) == "somename");
+}
+
+TEST_CASE("Move CtbConfig "){
+    CtbConfig c1;
+    c1.setDacName(3, "yetanothername");
+    CtbConfig c2(std::move(c1));
+    REQUIRE(c2.getDacName(3) == "yetanothername");
+}

slsDetectorSoftware/tests/test-SharedMemory.cpp

@@ -134,3 +134,31 @@ TEST_CASE("Create several shared memories", "[detector]") {
         CHECK(v[i].IsExisting() == false);
     }
 }
+
+TEST_CASE("Create create a shared memory with a tag"){
+    SharedMemory<int> shm(0, -1, "ctbdacs");
+    REQUIRE(shm.GetName() == "/slsDetectorPackage_detector_0_ctbdacs");
+
+}
+
+TEST_CASE("Create create a shared memory with a tag when SLSDETNAME is set"){
+
+    // if SLSDETNAME is already set we unset it but
+    // save the value
+    std::string old_slsdetname;
+    if (getenv(SHM_ENV_NAME))
+        old_slsdetname = getenv(SHM_ENV_NAME);
+    unsetenv(SHM_ENV_NAME);
+    setenv(SHM_ENV_NAME, "myprefix", 1);
+
+    SharedMemory<int> shm(0, -1, "ctbdacs");
+    REQUIRE(shm.GetName() == "/slsDetectorPackage_detector_0_myprefix_ctbdacs");
+
+    // Clean up after us
+    if (old_slsdetname.empty())
+        unsetenv(SHM_ENV_NAME);
+    else
+        setenv(SHM_ENV_NAME, old_slsdetname.c_str(), 1);
+
+}
+

slsReceiverSoftware/CMakeLists.txt

@@ -13,6 +13,7 @@ set(SOURCES
     src/DataStreamer.cpp
     src/Fifo.cpp
     src/Arping.cpp
+    src/MasterAttributes.cpp
 )
 
 set(PUBLICHEADERS

slsReceiverSoftware/src/ClientInterface.cpp

@@ -716,6 +716,7 @@ int ClientInterface::set_dynamic_range(Interface &socket) {
             break;
         */
         case 4:
+        case 12:
             if (detType == EIGER) {
                 exists = true;
             }
@@ -847,9 +848,13 @@ int ClientInterface::get_file_index(Interface &socket) {
 }
 
 int ClientInterface::get_frame_index(Interface &socket) {
-    uint64_t retval = impl()->getCurrentFrameIndex();
-    LOG(logDEBUG1) << "frame index:" << retval;
-    return socket.sendResult(retval);
+    auto retval = impl()->getCurrentFrameIndex();
+    LOG(logDEBUG1) << "frames index:" << sls::ToString(retval);
+    auto size = static_cast<int>(retval.size());
+    socket.Send(OK);
+    socket.Send(size);
+    socket.Send(retval);
+    return OK;
 }
 
 int ClientInterface::get_missing_packets(Interface &socket) {
@@ -863,9 +868,13 @@ int ClientInterface::get_missing_packets(Interface &socket) {
 }
 
 int ClientInterface::get_frames_caught(Interface &socket) {
-    int64_t retval = impl()->getFramesCaught();
-    LOG(logDEBUG1) << "frames caught:" << retval;
-    return socket.sendResult(retval);
+    auto retval = impl()->getFramesCaught();
+    LOG(logDEBUG1) << "frames caught:" << sls::ToString(retval);
+    auto size = static_cast<int>(retval.size());
+    socket.Send(OK);
+    socket.Send(size);
+    socket.Send(retval);
+    return OK;
 }
 
 int ClientInterface::set_file_write(Interface &socket) {

slsReceiverSoftware/src/DataProcessor.cpp

@@ -52,19 +52,7 @@ DataProcessor::~DataProcessor() { DeleteFiles(); }
 
 /** getters */
 
-bool DataProcessor::GetStartedFlag() { return startedFlag_; }
-
-uint64_t DataProcessor::GetNumFramesCaught() { return numFramesCaught_; }
-
-uint64_t DataProcessor::GetNumCompleteFramesCaught() {
-    return numCompleteFramesCaught_;
-}
-
-uint64_t DataProcessor::GetCurrentFrameIndex() { return currentFrameIndex_; }
-
-uint64_t DataProcessor::GetProcessedIndex() {
-    return currentFrameIndex_ - firstIndex_;
-}
+bool DataProcessor::GetStartedFlag() const { return startedFlag_; }
 
 void DataProcessor::SetFifo(Fifo *fifo) { fifo_ = fifo; }
 
@@ -72,7 +60,6 @@ void DataProcessor::ResetParametersforNewAcquisition() {
     StopRunning();
     startedFlag_ = false;
     numFramesCaught_ = 0;
-    numCompleteFramesCaught_ = 0;
     firstIndex_ = 0;
     currentFrameIndex_ = 0;
     firstStreamerFrame_ = true;
@@ -213,12 +200,14 @@ void DataProcessor::CreateVirtualFile(
     if (virtualFile_) {
         delete virtualFile_;
     }
-    virtualFile_ = new HDF5VirtualFile(hdf5Lib);
+    bool gotthard25um =
+        ((detectorType_ == GOTTHARD || detectorType_ == GOTTHARD2) &&
+         (numModX * numModY) == 2);
+    virtualFile_ = new HDF5VirtualFile(hdf5Lib, gotthard25um);
 
-    uint64_t numImagesProcessed = GetProcessedIndex() + 1;
     // maxframesperfile = 0 for infinite files
     uint32_t framesPerFile =
-        ((maxFramesPerFile == 0) ? numImagesProcessed + 1 : maxFramesPerFile);
+        ((maxFramesPerFile == 0) ? numFramesCaught_ : maxFramesPerFile);
 
     // TODO: assumption 1: create virtual file even if no data in other
     // files (they exist anyway) assumption2: virtual file max frame index
@@ -228,7 +217,7 @@ void DataProcessor::CreateVirtualFile(
         filePath, fileNamePrefix, fileIndex, overWriteEnable, silentMode,
         modulePos, numUnitsPerReadout, framesPerFile, numImages,
         generalData_->nPixelsX, generalData_->nPixelsY, dynamicRange,
-        numImagesProcessed, numModX, numModY, dataFile_->GetPDataType(),
+        numFramesCaught_, numModX, numModY, dataFile_->GetPDataType(),
         dataFile_->GetParameterNames(), dataFile_->GetParameterDataTypes());
 }
 
@@ -344,9 +333,6 @@ uint64_t DataProcessor::ProcessAnImage(char *buf) {
     currentFrameIndex_ = fnum;
     numFramesCaught_++;
     uint32_t nump = header.packetNumber;
-    if (nump == generalData_->packetsPerFrame) {
-        numCompleteFramesCaught_++;
-    }
 
     LOG(logDEBUG1) << "DataProcessing " << index << ": fnum:" << fnum;
 

slsReceiverSoftware/src/DataProcessor.h

@@ -36,13 +36,7 @@ class DataProcessor : private virtual slsDetectorDefs, public ThreadObject {
 
     ~DataProcessor() override;
 
-    bool GetStartedFlag();
-    uint64_t GetNumFramesCaught();
-    uint64_t GetNumCompleteFramesCaught();
-    /** (-1 if no frames have been caught */
-    uint64_t GetCurrentFrameIndex();
-    /** (-1 if no frames have been caught) */
-    uint64_t GetProcessedIndex();
+    bool GetStartedFlag() const;
 
     void SetFifo(Fifo *f);
     void ResetParametersforNewAcquisition();
@@ -178,9 +172,6 @@ class DataProcessor : private virtual slsDetectorDefs, public ThreadObject {
     /** Number of frames caught */
     uint64_t numFramesCaught_{0};
 
-    /** Number of complete frames caught */
-    uint64_t numCompleteFramesCaught_{0};
-
     /** Frame Number of latest processed frame number */
     std::atomic<uint64_t> currentFrameIndex_{0};
 

slsReceiverSoftware/src/HDF5DataFile.cpp

@@ -112,6 +112,7 @@ void HDF5DataFile::CreateFirstHDF5DataFile(
     udpPortNumber_ = udpPortNumber;
 
     switch (dynamicRange_) {
+    case 12:
     case 16:
         dataType_ = PredType::STD_U16LE;
         break;
@@ -248,8 +249,30 @@ void HDF5DataFile::WriteToFile(char *buffer, const int buffersize,
     WriteParameterDatasets(currentFrameNumber, (sls_receiver_header *)(buffer));
 }
 
+void HDF5DataFile::Convert12to16Bit(uint16_t *dst, uint8_t *src) {
+    for (int i = 0; i < EIGER_NUM_PIXELS; ++i) {
+        *dst = (uint16_t)(*src++ & 0xFF);
+        *dst++ |= (uint16_t)((*src & 0xF) << 8u);
+        ++i;
+        *dst = (uint16_t)((*src++ & 0xF0) >> 4u);
+        *dst++ |= (uint16_t)((*src++ & 0xFF) << 4u);
+    }
+}
+
 void HDF5DataFile::WriteDataFile(const uint64_t currentFrameNumber,
                                  char *buffer) {
+    // expand 12 bit to 16 bits
+    char *revBuffer = buffer;
+    if (dynamicRange_ == 12) {
+        revBuffer = (char *)malloc(EIGER_16_BIT_IMAGE_SIZE);
+        if (revBuffer == nullptr) {
+            throw sls::RuntimeError("Could not allocate memory for 12 bit to "
+                                    "16 bit conversion in object " +
+                                    std::to_string(index_));
+        }
+        Convert12to16Bit((uint16_t *)revBuffer, (uint8_t *)buffer);
+    }
+
     std::lock_guard<std::mutex> lock(*hdf5Lib_);
 
     uint64_t nDimx =
@@ -266,9 +289,15 @@ void HDF5DataFile::WriteDataFile(const uint64_t currentFrameNumber,
 
         dataSpace_->selectHyperslab(H5S_SELECT_SET, count, start);
         DataSpace memspace(2, dims2);
-        dataSet_->write(buffer, dataType_, memspace, *dataSpace_);
+        dataSet_->write(revBuffer, dataType_, memspace, *dataSpace_);
         memspace.close();
+        if (dynamicRange_ == 12) {
+            free(revBuffer);
+        }
     } catch (const Exception &error) {
+        if (dynamicRange_ == 12) {
+            free(revBuffer);
+        }
         LOG(logERROR) << "Could not write to file in object " << index_;
         error.printErrorStack();
         throw sls::RuntimeError("Could not write to file in object " +

slsReceiverSoftware/src/HDF5DataFile.h

@@ -35,6 +35,7 @@ class HDF5DataFile : private virtual slsDetectorDefs, public File {
 
   private:
     void CreateFile();
+    void Convert12to16Bit(uint16_t *dst, uint8_t *src);
     void WriteDataFile(const uint64_t currentFrameNumber, char *buffer);
     void WriteParameterDatasets(const uint64_t currentFrameNumber,
                                 sls_receiver_header *rheader);
@@ -72,4 +73,7 @@ class HDF5DataFile : private virtual slsDetectorDefs, public File {
     int detIndex_{0};
     int numUnitsPerReadout_{0};
     uint32_t udpPortNumber_{0};
+
+    static const int EIGER_NUM_PIXELS{256 * 2 * 256};
+    static const int EIGER_16_BIT_IMAGE_SIZE{EIGER_NUM_PIXELS * 2};
 };

slsReceiverSoftware/src/HDF5VirtualFile.cpp

@@ -5,8 +5,8 @@
 
 #include <iomanip>
 
-HDF5VirtualFile::HDF5VirtualFile(std::mutex *hdf5Lib)
-    : File(HDF5), hdf5Lib_(hdf5Lib) {}
+HDF5VirtualFile::HDF5VirtualFile(std::mutex *hdf5Lib, bool g25)
+    : File(HDF5), hdf5Lib_(hdf5Lib), gotthard25um(g25) {}
 
 HDF5VirtualFile::~HDF5VirtualFile() { CloseFile(); }
 
@@ -73,12 +73,10 @@ void HDF5VirtualFile::CreateVirtualFile(
             "version", PredType::NATIVE_DOUBLE, dataspace_attr);
         attribute.write(PredType::NATIVE_DOUBLE, &dValue);
 
-        // virtual data dataspace
+        // virtual dataspace
         hsize_t vdsDims[3] = {numImagesCaught, numModY * nDimy,
                               numModZ * nDimz};
         DataSpace vdsDataSpace(3, vdsDims, nullptr);
-
-        // virtual parameter dataspace
         hsize_t vdsDimsPara[2] = {numImagesCaught,
                                   (unsigned int)numModY * numModZ};
         DataSpace vdsDataSpacePara(2, vdsDimsPara, nullptr);
@@ -91,37 +89,54 @@ void HDF5VirtualFile::CreateVirtualFile(
         // property list for parameters (datatype)
         std::vector<DSetCreatPropList> plistPara(paraSize);
 
-        // hyperslab
-        int numMajorHyperslab = numImagesCaught / maxFramesPerFile;
+        // hyperslab (files)
+        int numFiles = numImagesCaught / maxFramesPerFile;
         if (numImagesCaught % maxFramesPerFile)
-            ++numMajorHyperslab;
+            ++numFiles;
         uint64_t framesSaved = 0;
-        // loop through files
-        for (int hyperSlab = 0; hyperSlab < numMajorHyperslab; ++hyperSlab) {
+        for (int iFile = 0; iFile < numFiles; ++iFile) {
 
             uint64_t nDimx =
                 ((numImagesCaught - framesSaved) > maxFramesPerFile)
                     ? maxFramesPerFile
                     : (numImagesCaught - framesSaved);
-            hsize_t start[3] = {framesSaved, 0, 0};
-            hsize_t count[3] = {nDimx, nDimy, nDimz};
-            hsize_t startPara[2] = {framesSaved, 0};
-            hsize_t countPara[2] = {nDimx, 1};
-            // loop through readouts
-            for (unsigned int i = 0; i < numModY * numModZ; ++i) {
 
-                // setect data hyperslabs
-                vdsDataSpace.selectHyperslab(H5S_SELECT_SET, count, start);
+            hsize_t startLocation[3] = {framesSaved, 0, 0};
+            hsize_t strideBetweenBlocks[3] = {1, 1, 1};
+            hsize_t numBlocks[3] = {nDimx, nDimy, nDimz};
+            hsize_t blockSize[3] = {1, 1, 1};
 
-                // select parameter hyperslabs
-                vdsDataSpacePara.selectHyperslab(H5S_SELECT_SET, countPara,
-                                                 startPara);
+            hsize_t startLocationPara[2] = {framesSaved, 0};
+            hsize_t strideBetweenBlocksPara[3] = {1, 1};
+            hsize_t numBlocksPara[2] = {1, 1};
+            hsize_t blockSizePara[3] = {nDimx, 1};
+
+            // interleaving for g2
+            if (gotthard25um) {
+                strideBetweenBlocks[2] = 2;
+            }
+
+            for (unsigned int iReadout = 0; iReadout < numModY * numModZ;
+                 ++iReadout) {
+
+                // interleaving for g2 (startLocation is 0 and 1)
+                if (gotthard25um) {
+                    startLocation[2] = iReadout;
+                }
+
+                vdsDataSpace.selectHyperslab(H5S_SELECT_SET, numBlocks,
+                                             startLocation, strideBetweenBlocks,
+                                             blockSize);
+
+                vdsDataSpacePara.selectHyperslab(
+                    H5S_SELECT_SET, numBlocksPara, startLocationPara,
+                    strideBetweenBlocksPara, blockSizePara);
 
                 // source file name
                 std::ostringstream os;
                 os << filePath << "/" << fileNamePrefix << "_d"
-                   << (modulePos * numUnitsPerReadout + i) << "_f" << hyperSlab
-                   << '_' << fileIndex << ".h5";
+                   << (modulePos * numUnitsPerReadout + iReadout) << "_f"
+                   << iFile << '_' << fileIndex << ".h5";
                 std::string srcFileName = os.str();
                 LOG(logDEBUG1) << srcFileName;
 
@@ -138,25 +153,20 @@ void HDF5VirtualFile::CreateVirtualFile(
                 std::ostringstream osfn;
                 osfn << "/data";
                 if (numImages > 1)
-                    osfn << "_f" << std::setfill('0') << std::setw(12)
-                         << hyperSlab;
+                    osfn << "_f" << std::setfill('0') << std::setw(12) << iFile;
                 std::string srcDatasetName = osfn.str();
 
-                // source data dataspace
+                // source dataspace
                 hsize_t srcDims[3] = {nDimx, nDimy, nDimz};
                 hsize_t srcDimsMax[3] = {H5S_UNLIMITED, nDimy, nDimz};
                 DataSpace srcDataSpace(3, srcDims, srcDimsMax);
-
-                // source parameter dataspace
                 hsize_t srcDimsPara[1] = {nDimx};
                 hsize_t srcDimsMaxPara[1] = {H5S_UNLIMITED};
                 DataSpace srcDataSpacePara(1, srcDimsPara, srcDimsMaxPara);
 
-                // mapping of data property list
+                // mapping of property list
                 plist.setVirtual(vdsDataSpace, relative_srcFileName.c_str(),
                                  srcDatasetName.c_str(), srcDataSpace);
-
-                // mapping of parameter property list
                 for (unsigned int p = 0; p < paraSize; ++p) {
                     plistPara[p].setVirtual(
                         vdsDataSpacePara, relative_srcFileName.c_str(),
@@ -165,21 +175,23 @@ void HDF5VirtualFile::CreateVirtualFile(
 
                 // H5Sclose(srcDataspace);
                 // H5Sclose(srcDataspace_para);
-                start[2] += nDimz;
-                if (start[2] >= (numModZ * nDimz)) {
-                    start[2] = 0;
-                    start[1] += nDimy;
+
+                if (!gotthard25um) {
+                    startLocation[2] += nDimz;
+                    if (startLocation[2] >= (numModZ * nDimz)) {
+                        startLocation[2] = 0;
+                        startLocation[1] += nDimy;
+                    }
                 }
-                startPara[1]++;
+                startLocationPara[1]++;
             }
             framesSaved += nDimx;
         }
-        // data dataset
+        // datasets
         dataSetName_ = "data";
         DataSet vdsDataSet(fd_->createDataSet(dataSetName_.c_str(), dataType,
                                               vdsDataSpace, plist));
 
-        // parameter dataset
         for (unsigned int p = 0; p < paraSize; ++p) {
             DataSet vdsDataSetPara(fd_->createDataSet(
                 parameterNames[p].c_str(), parameterDataTypes[p],
@@ -196,4 +208,4 @@ void HDF5VirtualFile::CreateVirtualFile(
     if (!silentMode) {
         LOG(logINFO) << "Virtual File: " << fileName_;
     }
-}
+}

slsReceiverSoftware/src/HDF5VirtualFile.h

@@ -9,7 +9,7 @@
 class HDF5VirtualFile : private virtual slsDetectorDefs, public File {
 
   public:
-    HDF5VirtualFile(std::mutex *hdf5Lib);
+    HDF5VirtualFile(std::mutex *hdf5Lib, bool g25);
     ~HDF5VirtualFile();
 
     std::array<std::string, 2> GetFileAndDatasetName() const override;
@@ -30,4 +30,5 @@ class HDF5VirtualFile : private virtual slsDetectorDefs, public File {
     H5File *fd_{nullptr};
     std::string fileName_;
     std::string dataSetName_;
+    bool gotthard25um;
 };

slsReceiverSoftware/src/Implementation.cpp

@@ -453,51 +453,51 @@ void Implementation::setFramesPerFile(const uint32_t i) {
  * ************************************************/
 slsDetectorDefs::runStatus Implementation::getStatus() const { return status; }
 
-uint64_t Implementation::getFramesCaught() const {
-    uint64_t min = -1;
-    uint32_t flagsum = 0;
-
-    for (const auto &it : dataProcessor) {
-        flagsum += it->GetStartedFlag();
-        min = std::min(min, it->GetNumCompleteFramesCaught());
+std::vector<int64_t> Implementation::getFramesCaught() const {
+    std::vector<int64_t> numFramesCaught(numUDPInterfaces);
+    int index = 0;
+    for (const auto &it : listener) {
+        if (it->GetStartedFlag()) {
+            numFramesCaught[index] = it->GetNumCompleteFramesCaught();
+        }
+        ++index;
     }
-    // no data processed
-    if (flagsum != dataProcessor.size())
-        return 0;
-
-    return min;
+    return numFramesCaught;
 }
 
-uint64_t Implementation::getCurrentFrameIndex() const {
-    uint64_t max = 0;
-    uint32_t flagsum = 0;
-
+std::vector<int64_t> Implementation::getCurrentFrameIndex() const {
+    std::vector<int64_t> frameIndex(numUDPInterfaces);
+    int index = 0;
     for (const auto &it : listener) {
-        flagsum += it->GetStartedFlag();
-        max = std::max(max, it->GetCurrentFrameIndex());
+        if (it->GetStartedFlag()) {
+            frameIndex[index] = it->GetCurrentFrameIndex();
+        }
+        ++index;
     }
-    // no data processed
-    if (flagsum != listener.size())
-        return 0;
-    return max;
+    return frameIndex;
 }
 
 double Implementation::getProgress() const {
-    // get minimum of processed frame indices
-    uint64_t currentFrameIndex = 0;
-    uint32_t flagsum = 0;
+    if (!activated || (!detectorDataStream[0] && !detectorDataStream[1])) {
+        return 100.00;
+    }
 
+    // if disabled, considering only 1 port
+    double totalFrames = (double)(numberOfTotalFrames * listener.size());
+    if (!detectorDataStream[0] || !detectorDataStream[1]) {
+        totalFrames /= 2;
+    }
+
+    double progress = 0;
+    int index = 0;
     for (const auto &it : listener) {
-        flagsum += it->GetStartedFlag();
-        currentFrameIndex = std::max(currentFrameIndex, it->GetListenedIndex());
+        if (detectorDataStream[index] && it->GetStartedFlag()) {
+            progress += (it->GetListenedIndex() + 1) / totalFrames;
+        }
+        ++index;
     }
-    // no data processed
-    if (flagsum != listener.size()) {
-        currentFrameIndex = -1;
-    }
-
-    return (100.00 *
-            ((double)(currentFrameIndex + 1) / (double)numberOfTotalFrames));
+    progress *= 100;
+    return progress;
 }
 
 std::vector<int64_t> Implementation::getNumMissingPackets() const {
@@ -627,7 +627,7 @@ void Implementation::stopReceiver() {
         // print summary
         uint64_t tot = 0;
         for (int i = 0; i < numUDPInterfaces; i++) {
-            int nf = dataProcessor[i]->GetNumCompleteFramesCaught();
+            int nf = listener[i]->GetNumCompleteFramesCaught();
             tot += nf;
             std::string mpMessage = std::to_string(mp[i]);
             if (mp[i] < 0) {
@@ -784,6 +784,12 @@ void Implementation::SetupWriter() {
         }
         masterAttributes->detType = detType;
         masterAttributes->timingMode = timingMode;
+        xy nm{numModules.x, numModules.y};
+        if (quadEnable) {
+            nm.x = 1;
+            nm.y = 2;
+        }
+        masterAttributes->geometry = xy(nm.x, nm.y);
         masterAttributes->imageSize = generalData->imageSize;
         masterAttributes->nPixels =
             xy(generalData->nPixelsX, generalData->nPixelsY);
@@ -1476,10 +1482,10 @@ void Implementation::setTenGigaEnable(const bool b) {
                 detectorDataStream[LEFT] = detectorDataStream10GbE[LEFT];
                 detectorDataStream[RIGHT] = detectorDataStream10GbE[RIGHT];
             }
-            LOG(logINFO) << "Detector datastream updated [Left: "
-                         << sls::ToString(detectorDataStream[LEFT])
-                         << ", Right: "
-                         << sls::ToString(detectorDataStream[RIGHT]) << "]";
+            LOG(logDEBUG) << "Detector datastream updated [Left: "
+                          << sls::ToString(detectorDataStream[LEFT])
+                          << ", Right: "
+                          << sls::ToString(detectorDataStream[RIGHT]) << "]";
         }
     }
     LOG(logINFO) << "Ten Giga: " << (tengigaEnable ? "enabled" : "disabled");
@@ -1550,6 +1556,13 @@ void Implementation::setDetectorDataStream(const portPosition port,
     detectorDataStream10GbE[index] = enable;
     LOG(logINFO) << "Detector 10GbE datastream (" << sls::ToString(port)
                  << " Port): " << sls::ToString(detectorDataStream10GbE[index]);
+    // update datastream for 10g
+    if (tengigaEnable) {
+        detectorDataStream[index] = detectorDataStream10GbE[index];
+        LOG(logDEBUG) << "Detector datastream updated ["
+                      << (index == 0 ? "Left" : "Right")
+                      << "] : " << sls::ToString(detectorDataStream[index]);
+    }
 }
 
 int Implementation::getReadNRows() const { return readNRows; }

slsReceiverSoftware/src/Implementation.h

@@ -84,8 +84,8 @@ class Implementation : private virtual slsDetectorDefs {
      *                                                 *
      * ************************************************/
     runStatus getStatus() const;
-    uint64_t getFramesCaught() const;
-    uint64_t getCurrentFrameIndex() const;
+    std::vector<int64_t> getFramesCaught() const;
+    std::vector<int64_t> getCurrentFrameIndex() const;
     double getProgress() const;
     std::vector<int64_t> getNumMissingPackets() const;
     void setScan(slsDetectorDefs::scanParameters s);

slsReceiverSoftware/src/Listener.cpp

@@ -36,12 +36,22 @@ Listener::~Listener() = default;
 
 uint64_t Listener::GetPacketsCaught() const { return numPacketsCaught; }
 
+uint64_t Listener::GetNumCompleteFramesCaught() const {
+    return numCompleteFramesCaught;
+}
+
 uint64_t Listener::GetLastFrameIndexCaught() const {
     return lastCaughtFrameIndex;
 }
 
 int64_t Listener::GetNumMissingPacket(bool stoppedFlag,
                                       uint64_t numPackets) const {
+    if (!activated) {
+        return 0;
+    }
+    if (!(*detectorDataStream)) {
+        return 0;
+    }
     if (!stoppedFlag) {
         return (numPackets - numPacketsCaught);
     }
@@ -53,11 +63,11 @@ int64_t Listener::GetNumMissingPacket(bool stoppedFlag,
            numPacketsCaught;
 }
 
-bool Listener::GetStartedFlag() { return startedFlag; }
+bool Listener::GetStartedFlag() const { return startedFlag; }
 
-uint64_t Listener::GetCurrentFrameIndex() { return lastCaughtFrameIndex; }
+uint64_t Listener::GetCurrentFrameIndex() const { return lastCaughtFrameIndex; }
 
-uint64_t Listener::GetListenedIndex() {
+uint64_t Listener::GetListenedIndex() const {
     return lastCaughtFrameIndex - firstIndex;
 }
 
@@ -67,6 +77,7 @@ void Listener::ResetParametersforNewAcquisition() {
     StopRunning();
     startedFlag = false;
     numPacketsCaught = 0;
+    numCompleteFramesCaught = 0;
     firstIndex = 0;
     currentFrameIndex = 0;
     lastCaughtFrameIndex = 0;
@@ -607,6 +618,9 @@ uint32_t Listener::ListenToAnImage(char *buf) {
     // complete image
     new_header->detHeader.packetNumber = numpackets; // number of packets caught
     new_header->detHeader.frameNumber = currentFrameIndex;
+    if (numpackets == pperFrame) {
+        ++numCompleteFramesCaught;
+    }
     ++currentFrameIndex;
     return imageSize;
 }

slsReceiverSoftware/src/Listener.h

@@ -51,53 +51,19 @@ class Listener : private virtual slsDetectorDefs, public ThreadObject {
      */
     ~Listener();
 
-    /**
-     * Get Packets caught
-     * @return Packets caught
-     */
     uint64_t GetPacketsCaught() const;
-
-    /**
-     * Get Last Frame index caught
-     * @return last frame index caught
-     */
+    uint64_t GetNumCompleteFramesCaught() const;
     uint64_t GetLastFrameIndexCaught() const;
-
-    /** Get  number of missing packets, returns negative values in case to extra
-     * packet */
+    /**  negative values in case of extra packets */
     int64_t GetNumMissingPacket(bool stoppedFlag, uint64_t numPackets) const;
+    bool GetStartedFlag() const;
+    uint64_t GetCurrentFrameIndex() const;
+    uint64_t GetListenedIndex() const;
 
-    bool GetStartedFlag();
-
-    uint64_t GetCurrentFrameIndex();
-    /** (-1 if no frames have been caught) */
-    uint64_t GetListenedIndex();
-
-    /**
-     * Set Fifo pointer to the one given
-     * @param f address of Fifo pointer
-     */
     void SetFifo(Fifo *f);
-
-    /**
-     * Reset parameters for new acquisition
-     */
     void ResetParametersforNewAcquisition();
-
-    /**
-     * Set GeneralData pointer to the one given
-     * @param g address of GeneralData (Detector Data) pointer
-     */
     void SetGeneralData(GeneralData *g);
-
-    /**
-     * Creates UDP Sockets
-     */
     void CreateUDPSockets();
-
-    /**
-     * Shuts down and deletes UDP Sockets
-     */
     void ShutDownUDPSocket();
 
     /**
@@ -116,10 +82,6 @@ class Listener : private virtual slsDetectorDefs, public ThreadObject {
     void SetHardCodedPosition(uint16_t r, uint16_t c);
 
   private:
-    /**
-     * Record First Acquisition Index
-     * @param fnum frame index to record
-     */
     void RecordFirstIndex(uint64_t fnum);
 
     /**
@@ -146,55 +108,25 @@ class Listener : private virtual slsDetectorDefs, public ThreadObject {
      */
     uint32_t ListenToAnImage(char *buf);
 
-    /**
-     * Print Fifo Statistics
-     */
     void PrintFifoStatistics();
 
-    /** type of thread */
     static const std::string TypeName;
-
-    /** GeneralData (Detector Data) object */
     GeneralData *generalData{nullptr};
-
-    /** Fifo structure */
     Fifo *fifo;
 
     // individual members
-    /** Detector Type */
     detectorType myDetectorType;
-
-    /** Receiver Status */
     std::atomic<runStatus> *status;
-
-    /** UDP Socket - Detector to Receiver */
     std::unique_ptr<sls::UdpRxSocket> udpSocket{nullptr};
-
-    /** UDP Port Number */
     uint32_t *udpPortNumber;
-
-    /** ethernet interface */
     std::string *eth;
-
-    /** UDP Socket Buffer Size */
     int *udpSocketBufferSize;
-
-    /** actual UDP Socket Buffer Size (double due to kernel bookkeeping) */
+    /** double due to kernel bookkeeping */
     int *actualUDPSocketBufferSize;
-
-    /** frames per file */
     uint32_t *framesPerFile;
-
-    /** frame discard policy */
     frameDiscardPolicy *frameDiscardMode;
-
-    /** Activated/Deactivated */
     bool *activated;
-
-    /** detector data stream */
     bool *detectorDataStream;
-
-    /** Silent Mode */
     bool *silentMode;
 
     /** row hardcoded as 1D or 2d,
@@ -209,15 +141,12 @@ class Listener : private virtual slsDetectorDefs, public ThreadObject {
     // acquisition start
     /** Aquisition Started flag */
     std::atomic<bool> startedFlag{false};
-
     /** Frame Number of First Frame  */
     uint64_t firstIndex{0};
 
     // for acquisition summary
-    /** Number of complete Packets caught */
     std::atomic<uint64_t> numPacketsCaught{0};
-
-    /** Last Frame Index caught  from udp network */
+    std::atomic<uint64_t> numCompleteFramesCaught{0};
     std::atomic<uint64_t> lastCaughtFrameIndex{0};
 
     // parameters to acquire image
@@ -225,25 +154,16 @@ class Listener : private virtual slsDetectorDefs, public ThreadObject {
      * ( always check startedFlag for validity first)
      */
     uint64_t currentFrameIndex{0};
-
     /** True if there is a packet carry over from previous Image */
     bool carryOverFlag{false};
-
-    /** Carry over packet buffer */
     std::unique_ptr<char[]> carryOverPacket;
-
     /** Listening buffer for one packet - might be removed when we can peek and
      * eiger fnum is in header */
     std::unique_ptr<char[]> listeningPacket;
-
-    /** if the udp socket is connected */
     std::atomic<bool> udpSocketAlive{false};
 
-    // for print progress during acquisition
-    /** number of packets for statistic */
+    // for print progress during acquisition*/
     uint32_t numPacketsStatistic{0};
-
-    /** number of images for statistic */
     uint32_t numFramesStatistic{0};
 
     /**

slsReceiverSoftware/src/MasterAttributes.cpp

@@ -0,0 +1,676 @@
+// SPDX-License-Identifier: LGPL-3.0-or-other
+// Copyright (C) 2021 Contributors to the SLS Detector Package
+#include "MasterAttributes.h"
+
+void MasterAttributes::WriteMasterBinaryAttributes(FILE *fd) {
+    LOG(logERROR) << "WriteMasterBinaryAttributes should have been called "
+                     "by a child class";
+}
+
+std::string MasterAttributes::GetBinaryMasterAttributes() {
+    time_t t = time(nullptr);
+    std::ostringstream oss;
+    oss << "Version                    : " << std::setprecision(2)
+        << BINARY_WRITER_VERSION << '\n'
+        << "TimeStamp                  : " << ctime(&t) << '\n'
+        << "Detector Type              : " << sls::ToString(detType) << '\n'
+        << "Timing Mode                : " << sls::ToString(timingMode) << '\n'
+        << "Geometry                   : " << sls::ToString(geometry) << '\n'
+        << "Image Size                 : " << imageSize << " bytes" << '\n'
+        << "Pixels                     : " << sls::ToString(nPixels) << '\n'
+        << "Max Frames Per File        : " << maxFramesPerFile << '\n'
+        << "Frame Discard Policy       : " << sls::ToString(frameDiscardMode)
+        << '\n'
+        << "Frame Padding              : " << framePadding << '\n'
+        << "Scan Parameters            : " << sls::ToString(scanParams) << '\n'
+        << "Total Frames               : " << totalFrames << '\n';
+    return oss.str();
+};
+
+void MasterAttributes::WriteBinaryAttributes(FILE *fd, std::string message) {
+    if (fwrite((void *)message.c_str(), 1, message.length(), fd) !=
+        message.length()) {
+        throw sls::RuntimeError(
+            "Master binary file incorrect number of bytes written to file");
+    }
+};
+
+void MasterAttributes::WriteFinalBinaryAttributes(FILE *fd) {
+    // adding few common parameters to the end
+    std::ostringstream oss;
+
+    if (!additionalJsonHeader.empty()) {
+        oss << "Additional Json Header     : "
+            << sls::ToString(additionalJsonHeader) << '\n';
+    }
+    oss << "Frames in File             : " << framesInFile << '\n';
+
+    // adding sls_receiver header format
+    oss << '\n'
+        << "#Frame Header" << '\n'
+        << "Frame Number               : 8 bytes" << '\n'
+        << "SubFrame Number/ExpLength  : 4 bytes" << '\n'
+        << "Packet Number              : 4 bytes" << '\n'
+        << "Bunch ID                   : 8 bytes" << '\n'
+        << "Timestamp                  : 8 bytes" << '\n'
+        << "Module Id                  : 2 bytes" << '\n'
+        << "Row                        : 2 bytes" << '\n'
+        << "Column                     : 2 bytes" << '\n'
+        << "Reserved                   : 2 bytes" << '\n'
+        << "Debug                      : 4 bytes" << '\n'
+        << "Round Robin Number         : 2 bytes" << '\n'
+        << "Detector Type              : 1 byte" << '\n'
+        << "Header Version             : 1 byte" << '\n'
+        << "Packets Caught Mask        : 64 bytes" << '\n';
+
+    std::string message = oss.str();
+
+    // writing to file
+    if (fwrite((void *)message.c_str(), 1, message.length(), fd) !=
+        message.length()) {
+        throw sls::RuntimeError(
+            "Master binary file incorrect number of bytes written to file");
+    }
+};
+
+#ifdef HDF5C
+void MasterAttributes::WriteMasterHDF5Attributes(H5File *fd, Group *group) {
+    LOG(logERROR) << "WriteMasterHdf5Attributes should have been called "
+                     "by a child class";
+};
+
+void MasterAttributes::WriteHDF5Attributes(H5File *fd, Group *group) {
+    char c[1024];
+    memset(c, 0, sizeof(c));
+    // clang-format off
+        // version
+        {
+            double version = BINARY_WRITER_VERSION;
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            Attribute attribute = fd->createAttribute(
+                "Version", PredType::NATIVE_DOUBLE, dataspace);
+            attribute.write(PredType::NATIVE_DOUBLE, &version);
+        }
+        // timestamp
+        {
+            time_t t = time(nullptr);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset =
+            group->createDataSet("Timestamp", strdatatype, dataspace);
+            sls::strcpy_safe(c, std::string(ctime(&t)));
+            dataset.write(c, strdatatype);
+        }
+        // detector type
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+            group->createDataSet("Detector Type", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(detType));
+            dataset.write(c, strdatatype);
+        }
+        // timing mode
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+            group->createDataSet("Timing Mode", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(timingMode));
+            dataset.write(c, strdatatype);
+        }
+        //TODO: make this into an array?
+        // geometry x
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Geometry in x axis", PredType::NATIVE_INT, dataspace);
+            dataset.write(&geometry.x, PredType::NATIVE_INT);
+        }
+        // geometry y
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Geometry in y axis", PredType::NATIVE_INT, dataspace);
+            dataset.write(&geometry.y, PredType::NATIVE_INT);
+        }
+        // Image Size
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Image Size", PredType::NATIVE_INT, dataspace);
+            dataset.write(&imageSize, PredType::NATIVE_INT);
+            DataSpace dataspaceAttr = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            Attribute attribute =
+            dataset.createAttribute("Unit", strdatatype, dataspaceAttr);
+            sls::strcpy_safe(c, "bytes");
+            attribute.write(strdatatype, c);
+        }
+        //TODO: make this into an array?
+        // npixels x
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Number of pixels in x axis", PredType::NATIVE_INT, dataspace);
+            dataset.write(&nPixels.x, PredType::NATIVE_INT);
+        }
+        // npixels y
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Number of pixels in y axis", PredType::NATIVE_INT, dataspace);
+            dataset.write(&nPixels.y, PredType::NATIVE_INT);
+        }
+        // Maximum frames per file
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Maximum frames per file", PredType::NATIVE_INT, dataspace);
+            dataset.write(&maxFramesPerFile, PredType::NATIVE_INT);
+        }
+        // Frame Discard Policy
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+            group->createDataSet("Frame Discard Policy", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(frameDiscardMode));
+            dataset.write(c, strdatatype);
+        }        
+        // Frame Padding
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Frame Padding", PredType::NATIVE_INT, dataspace);
+            dataset.write(&framePadding, PredType::NATIVE_INT);
+        }
+        // Scan Parameters
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+            group->createDataSet("Scan Parameters", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(scanParams));
+            dataset.write(c, strdatatype);
+        }   
+        // Total Frames
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Total Frames", PredType::STD_U64LE, dataspace);
+            dataset.write(&totalFrames, PredType::STD_U64LE);
+        }
+    };
+
+    void MasterAttributes::WriteFinalHDF5Attributes(H5File *fd, Group *group) {
+        char c[1024];
+        memset(c, 0, sizeof(c));
+        // Total Frames in file
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Frames in File", PredType::STD_U64LE, dataspace);
+            dataset.write(&framesInFile, PredType::STD_U64LE);
+        }
+        // additional json header
+        if (!additionalJsonHeader.empty()) {
+            std::string json = sls::ToString(additionalJsonHeader);
+            StrType strdatatype(PredType::C_S1, json.length());
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset =
+            group->createDataSet("Additional JSON Header", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(additionalJsonHeader));
+            dataset.write(c, strdatatype);
+        }
+    };
+
+    void MasterAttributes::WriteHDF5Exptime(H5File *fd, Group *group) {
+        DataSpace dataspace = DataSpace(H5S_SCALAR);
+        StrType strdatatype(PredType::C_S1, 256);
+        DataSet dataset =
+        group->createDataSet("Exposure Time", strdatatype, dataspace);
+        char c[1024];
+        memset(c, 0, sizeof(c));
+        sls::strcpy_safe(c, sls::ToString(exptime));
+        dataset.write(c, strdatatype);
+    };
+
+    void MasterAttributes::WriteHDF5Period(H5File *fd, Group *group) {
+        DataSpace dataspace = DataSpace(H5S_SCALAR);
+        StrType strdatatype(PredType::C_S1, 256);
+        DataSet dataset =
+        group->createDataSet("Acquisition Period", strdatatype, dataspace);
+        char c[1024];
+        memset(c, 0, sizeof(c));
+        sls::strcpy_safe(c, sls::ToString(period));
+        dataset.write(c, strdatatype);
+    };
+
+    void MasterAttributes::WriteHDF5DynamicRange(H5File *fd, Group *group) {
+        DataSpace dataspace = DataSpace(H5S_SCALAR);
+        DataSet dataset = group->createDataSet(
+            "Dynamic Range", PredType::NATIVE_INT, dataspace);
+        dataset.write(&dynamicRange, PredType::NATIVE_INT);
+        DataSpace dataspaceAttr = DataSpace(H5S_SCALAR);
+        StrType strdatatype(PredType::C_S1, 256);
+        Attribute attribute =
+        dataset.createAttribute("Unit", strdatatype, dataspaceAttr);
+        char c[1024] = "bits";
+        attribute.write( strdatatype, c);
+    };
+
+    void MasterAttributes::WriteHDF5TenGiga(H5File *fd, Group *group) {
+        DataSpace dataspace = DataSpace(H5S_SCALAR);
+        DataSet dataset = group->createDataSet(
+            "Ten Giga Enable", PredType::NATIVE_INT, dataspace);
+        dataset.write(&tenGiga, PredType::NATIVE_INT);
+    };
+#endif
+
+    void GotthardMasterAttributes::WriteMasterBinaryAttributes(FILE *fd) {
+        std::ostringstream oss;
+        oss << MasterAttributes::GetBinaryMasterAttributes()
+            << "Exptime                    : " << sls::ToString(exptime) << '\n'
+            << "Period                     : " << sls::ToString(period) << '\n'
+            << "Roi (xmin, xmax)           : " << sls::ToString(roi) << '\n';
+        std::string message = oss.str();
+        MasterAttributes::WriteBinaryAttributes(fd, message);
+    };
+
+#ifdef HDF5C
+    void GotthardMasterAttributes::WriteMasterHDF5Attributes(H5File *fd, Group *group) {
+        MasterAttributes::WriteHDF5Attributes(fd, group);
+        MasterAttributes::WriteHDF5Exptime(fd, group);
+        MasterAttributes::WriteHDF5Period(fd, group);
+        // Roi xmin
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "roi xmin", PredType::NATIVE_INT, dataspace);
+            dataset.write(&roi.xmin, PredType::NATIVE_INT);
+        }
+        // Roi xmax
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "roi xmax", PredType::NATIVE_INT, dataspace);
+            dataset.write(&roi.xmax, PredType::NATIVE_INT);
+        }
+    };
+#endif
+
+    void JungfrauMasterAttributes::WriteMasterBinaryAttributes(FILE *fd) {
+        std::ostringstream oss;
+        oss << MasterAttributes::GetBinaryMasterAttributes()
+            << "Exptime                    : " << sls::ToString(exptime) << '\n'
+            << "Period                     : " << sls::ToString(period) << '\n'
+            << "Number of UDP Interfaces   : " << numUDPInterfaces << '\n'
+            << "Number of rows             : " << readNRows << '\n';
+        std::string message = oss.str();
+        MasterAttributes::WriteBinaryAttributes(fd, message);
+    };
+
+#ifdef HDF5C
+    void JungfrauMasterAttributes::WriteMasterHDF5Attributes(H5File *fd, Group *group) {
+        MasterAttributes::WriteHDF5Attributes(fd, group);
+        MasterAttributes::WriteHDF5Exptime(fd, group);
+        MasterAttributes::WriteHDF5Period(fd, group);
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Number of UDP Interfaces", PredType::NATIVE_INT, dataspace);
+            dataset.write(&numUDPInterfaces, PredType::NATIVE_INT);
+        }
+        // readNRows
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Number of rows", PredType::NATIVE_INT, dataspace);
+            dataset.write(&readNRows, PredType::NATIVE_INT);
+        }
+    };
+#endif
+
+    void EigerMasterAttributes::WriteMasterBinaryAttributes(FILE *fd) {
+        std::ostringstream oss;
+        oss << MasterAttributes::GetBinaryMasterAttributes()
+            << "Dynamic Range              : " << dynamicRange << '\n'
+            << "Ten Giga                   : " << tenGiga << '\n'
+            << "Exptime                    : " << sls::ToString(exptime) << '\n'
+            << "Period                     : " << sls::ToString(period) << '\n'
+            << "Threshold Energy           : " << thresholdEnergyeV << '\n'
+            << "SubExptime                 : " << sls::ToString(subExptime)
+            << '\n'
+            << "SubPeriod                  : " << sls::ToString(subPeriod)
+            << '\n'
+            << "Quad                       : " << quad << '\n'
+            << "Number of rows             : " << readNRows << '\n'
+            << "Rate Corrections           : " << sls::ToString(ratecorr)
+            << '\n';
+        std::string message = oss.str();
+        MasterAttributes::WriteBinaryAttributes(fd, message);
+    };
+
+#ifdef HDF5C
+    void EigerMasterAttributes::WriteMasterHDF5Attributes(H5File *fd, Group *group) {
+        MasterAttributes::WriteHDF5Attributes(fd, group);
+        MasterAttributes::WriteHDF5DynamicRange(fd, group);
+        MasterAttributes::WriteHDF5TenGiga(fd, group);
+        MasterAttributes::WriteHDF5Exptime(fd, group);
+        MasterAttributes::WriteHDF5Period(fd, group);
+        char c[1024];
+        memset(c, 0, sizeof(c));
+        // threshold
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Threshold Energy", PredType::NATIVE_INT, dataspace);
+            dataset.write(&thresholdEnergyeV, PredType::NATIVE_INT);
+            DataSpace dataspaceAttr = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            Attribute attribute =
+                dataset.createAttribute("Unit", strdatatype, dataspaceAttr);
+            sls::strcpy_safe(c, "eV");
+            attribute.write(strdatatype, c);
+        }
+        // SubExptime
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset = group->createDataSet("Sub Exposure Time",
+                                                   strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(subExptime));
+            dataset.write(c, strdatatype);
+        }
+        // SubPeriod
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+                group->createDataSet("Sub Period", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(subPeriod));
+            dataset.write(c, strdatatype);
+        }
+        // Quad
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset =
+                group->createDataSet("Quad", PredType::NATIVE_INT, dataspace);
+            dataset.write(&quad, PredType::NATIVE_INT);
+        }
+        // readNRows
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Number of rows", PredType::NATIVE_INT, dataspace);
+            dataset.write(&readNRows, PredType::NATIVE_INT);
+        }
+        // Rate corrections
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 1024);
+            DataSet dataset = group->createDataSet("Rate Corrections",
+                                                   strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(ratecorr));
+            dataset.write(c, strdatatype);
+        }
+    };
+#endif
+
+    void Mythen3MasterAttributes::WriteMasterBinaryAttributes(FILE *fd) {
+        std::ostringstream oss;
+        oss << MasterAttributes::GetBinaryMasterAttributes()
+            << "Dynamic Range              : " << dynamicRange << '\n'
+            << "Ten Giga                   : " << tenGiga << '\n'
+            << "Period                     : " << sls::ToString(period) << '\n'
+            << "Counter Mask               : " << sls::ToStringHex(counterMask)
+            << '\n'
+            << "Exptime1                   : " << sls::ToString(exptime1)
+            << '\n'
+            << "Exptime2                   : " << sls::ToString(exptime2)
+            << '\n'
+            << "Exptime3                   : " << sls::ToString(exptime3)
+            << '\n'
+            << "GateDelay1                 : " << sls::ToString(gateDelay1)
+            << '\n'
+            << "GateDelay2                 : " << sls::ToString(gateDelay2)
+            << '\n'
+            << "GateDelay3                 : " << sls::ToString(gateDelay3)
+            << '\n'
+            << "Gates                      : " << gates << '\n'
+            << "Threshold Energies         : "
+            << sls::ToString(thresholdAllEnergyeV) << '\n';
+        std::string message = oss.str();
+        MasterAttributes::WriteBinaryAttributes(fd, message);
+    };
+
+#ifdef HDF5C
+    void Mythen3MasterAttributes::WriteMasterHDF5Attributes(H5File *fd, Group *group) {
+        MasterAttributes::WriteHDF5Attributes(fd, group);
+        MasterAttributes::WriteHDF5DynamicRange(fd, group);
+        MasterAttributes::WriteHDF5TenGiga(fd, group);
+        MasterAttributes::WriteHDF5Period(fd, group);
+        char c[1024];
+        memset(c, 0, sizeof(c));
+        // Counter Mask
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Counter Mask", PredType::STD_U32LE, dataspace);
+            dataset.write(&counterMask, PredType::STD_U32LE);
+        }
+        // Exptime1
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+                group->createDataSet("Exposure Time1", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(exptime1));
+            dataset.write(c, strdatatype);
+        }
+        // Exptime2
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+                group->createDataSet("Exposure Time2", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(exptime2));
+            dataset.write(c, strdatatype);
+        }
+        // Exptime3
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+                group->createDataSet("Exposure Time3", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(exptime3));
+            dataset.write(c, strdatatype);
+        }
+        // GateDelay1
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+                group->createDataSet("Gate Delay1", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(gateDelay1));
+            dataset.write(c, strdatatype);
+        }
+        // GateDelay2
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+                group->createDataSet("Gate Delay2", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(gateDelay2));
+            dataset.write(c, strdatatype);
+        }
+        // GateDelay3
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+                group->createDataSet("Gate Delay3", strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(gateDelay3));
+            dataset.write(c, strdatatype);
+        }
+        // Gates
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset =
+                group->createDataSet("Gates", PredType::STD_U32LE, dataspace);
+            dataset.write(&gates, PredType::STD_U32LE);
+        }
+        // Threshold Energies
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 1024);
+            DataSet dataset = group->createDataSet("Threshold Energies",
+                                                   strdatatype, dataspace);
+            sls::strcpy_safe(c, sls::ToString(thresholdAllEnergyeV));
+            dataset.write(c, strdatatype);
+        }
+    };
+#endif
+
+    void Gotthard2MasterAttributes::WriteMasterBinaryAttributes(FILE *fd) {
+        std::ostringstream oss;
+        oss << MasterAttributes::GetBinaryMasterAttributes()
+            << "Exptime                    : " << sls::ToString(exptime) << '\n'
+            << "Period                     : " << sls::ToString(period) << '\n'
+            << "Burst Mode                 : " << sls::ToString(burstMode)
+            << '\n';
+        std::string message = oss.str();
+        MasterAttributes::WriteBinaryAttributes(fd, message);
+    };
+
+#ifdef HDF5C
+    void Gotthard2MasterAttributes::WriteMasterHDF5Attributes(H5File *fd, Group *group) {
+        MasterAttributes::WriteHDF5Attributes(fd, group);
+        MasterAttributes::WriteHDF5Exptime(fd, group);
+        MasterAttributes::WriteHDF5Period(fd, group);
+        // burst mode
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            StrType strdatatype(PredType::C_S1, 256);
+            DataSet dataset =
+                group->createDataSet("Burst Mode", strdatatype, dataspace);
+            char c[1024];
+            memset(c, 0, sizeof(c));
+            sls::strcpy_safe(c, sls::ToString(burstMode));
+            dataset.write(c, strdatatype);
+        }
+    };
+#endif
+
+    void MoenchMasterAttributes::WriteMasterBinaryAttributes(FILE *fd) {
+        std::ostringstream oss;
+        oss << MasterAttributes::GetBinaryMasterAttributes()
+            << "Exptime                    : " << sls::ToString(exptime) << '\n'
+            << "Period                     : " << sls::ToString(period) << '\n'
+            << "Ten Giga                   : " << tenGiga << '\n'
+            << "ADC Mask                   : " << sls::ToStringHex(adcmask)
+            << '\n'
+            << "Analog Samples             : " << analogSamples << '\n';
+        std::string message = oss.str();
+        MasterAttributes::WriteBinaryAttributes(fd, message);
+    };
+
+#ifdef HDF5C
+    void MoenchMasterAttributes::WriteMasterHDF5Attributes(H5File *fd, Group *group) {
+        MasterAttributes::WriteHDF5Attributes(fd, group);
+        MasterAttributes::WriteHDF5Exptime(fd, group);
+        MasterAttributes::WriteHDF5Period(fd, group);
+        MasterAttributes::WriteHDF5TenGiga(fd, group);
+        // ADC Mask
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "ADC Mask", PredType::NATIVE_INT, dataspace);
+            dataset.write(&adcmask, PredType::NATIVE_INT);
+        }
+        // Analog Samples
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Analog Samples", PredType::NATIVE_INT, dataspace);
+            dataset.write(&analogSamples, PredType::NATIVE_INT);
+        }
+    };
+#endif
+
+    void CtbMasterAttributes::WriteMasterBinaryAttributes(FILE *fd) {
+        std::ostringstream oss;
+        oss << MasterAttributes::GetBinaryMasterAttributes()
+            << "Exptime                    : " << sls::ToString(exptime) << '\n'
+            << "Period                     : " << sls::ToString(period) << '\n'
+            << "Ten Giga                   : " << tenGiga << '\n'
+            << "ADC Mask                   : " << sls::ToStringHex(adcmask)
+            << '\n'
+            << "Analog Flag                : " << analog << '\n'
+            << "Analog Samples             : " << analogSamples << '\n'
+            << "Digital Flag               : " << digital << '\n'
+            << "Digital Samples            : " << digitalSamples << '\n'
+            << "Dbit Offset                : " << dbitoffset << '\n'
+            << "Dbit Bitset                : " << dbitlist << '\n';
+        std::string message = oss.str();
+        MasterAttributes::WriteBinaryAttributes(fd, message);
+    };
+
+#ifdef HDF5C
+    void CtbMasterAttributes::WriteMasterHDF5Attributes(H5File *fd, Group *group) {
+        MasterAttributes::WriteHDF5Attributes(fd, group);
+        MasterAttributes::WriteHDF5Exptime(fd, group);
+        MasterAttributes::WriteHDF5Period(fd, group);
+        MasterAttributes::WriteHDF5TenGiga(fd, group);
+        // ADC Mask
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "ADC mMsk", PredType::NATIVE_INT, dataspace);
+            dataset.write(&adcmask, PredType::NATIVE_INT);
+        }
+        // Analog Flag
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Analog Flag", PredType::NATIVE_INT, dataspace);
+            dataset.write(&analog, PredType::NATIVE_INT);
+        }
+        // Analog Samples
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Analog Samples", PredType::NATIVE_INT, dataspace);
+            dataset.write(&analogSamples, PredType::NATIVE_INT);
+        }
+        // Digital Flag
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Digital Flag", PredType::NATIVE_INT, dataspace);
+            dataset.write(&digital, PredType::NATIVE_INT);
+        }
+        // Digital Samples
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Digital Samples", PredType::NATIVE_INT, dataspace);
+            dataset.write(&digitalSamples, PredType::NATIVE_INT);
+        }
+        // Dbit Offset
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Dbit Offset", PredType::NATIVE_INT, dataspace);
+            dataset.write(&dbitoffset, PredType::NATIVE_INT);
+        }
+        // Dbit List
+        {
+            DataSpace dataspace = DataSpace(H5S_SCALAR);
+            DataSet dataset = group->createDataSet(
+                "Dbit Bitset List", PredType::STD_U64LE, dataspace);
+            dataset.write(&dbitlist, PredType::STD_U64LE);
+        }
+    };
+#endif

slsReceiverSoftware/src/MasterAttributes.h

@@ -17,10 +17,12 @@ using namespace H5;
 #include <chrono>
 using ns = std::chrono::nanoseconds;
 
-struct MasterAttributes {
+class MasterAttributes {
+  public:
     // (before acquisition)
     slsDetectorDefs::detectorType detType{slsDetectorDefs::GENERIC};
     slsDetectorDefs::timingMode timingMode{slsDetectorDefs::AUTO_TIMING};
+    slsDetectorDefs::xy geometry{};
     uint32_t imageSize{0};
     slsDetectorDefs::xy nPixels{};
     uint32_t maxFramesPerFile{0};
@@ -63,701 +65,82 @@ struct MasterAttributes {
     // Final Attributes (after acquisition)
     uint64_t framesInFile{0};
 
-    MasterAttributes(){};
-    virtual ~MasterAttributes(){};
-
-    virtual void WriteMasterBinaryAttributes(FILE *fd) {
-        LOG(logERROR) << "WriteMasterBinaryAttributes should have been called "
-                         "by a child class";
-    }
-
-    std::string GetBinaryMasterAttributes() {
-        time_t t = time(nullptr);
-        std::ostringstream oss;
-        oss << "Version                    : " << std::setprecision(2)
-            << BINARY_WRITER_VERSION << '\n'
-            << "TimeStamp                  : " << ctime(&t) << '\n'
-            << "Detector Type              : " << sls::ToString(detType) << '\n'
-            << "Timing Mode                : " << sls::ToString(timingMode)
-            << '\n'
-            << "Image Size                 : " << imageSize << " bytes" << '\n'
-            << "Pixels                     : " << sls::ToString(nPixels) << '\n'
-            << "Max Frames Per File        : " << maxFramesPerFile << '\n'
-            << "Frame Discard Policy       : "
-            << sls::ToString(frameDiscardMode) << '\n'
-            << "Frame Padding              : " << framePadding << '\n'
-            << "Scan Parameters            : " << sls::ToString(scanParams)
-            << '\n'
-            << "Total Frames               : " << totalFrames << '\n';
-        return oss.str();
-    };
-
-    void WriteBinaryAttributes(FILE *fd, std::string message) {
-        if (fwrite((void *)message.c_str(), 1, message.length(), fd) !=
-            message.length()) {
-            throw sls::RuntimeError(
-                "Master binary file incorrect number of bytes written to file");
-        }
-    };
-
-    void WriteFinalBinaryAttributes(FILE *fd) {
-        // adding few common parameters to the end
-        std::ostringstream oss;
-
-        if (!additionalJsonHeader.empty()) {
-            oss << "Additional Json Header     : "
-                << sls::ToString(additionalJsonHeader) << '\n';
-        }
-        oss << "Frames in File             : " << framesInFile << '\n';
-
-        // adding sls_receiver header format
-        oss << '\n'
-            << "#Frame Header" << '\n'
-            << "Frame Number               : 8 bytes" << '\n'
-            << "SubFrame Number/ExpLength  : 4 bytes" << '\n'
-            << "Packet Number              : 4 bytes" << '\n'
-            << "Bunch ID                   : 8 bytes" << '\n'
-            << "Timestamp                  : 8 bytes" << '\n'
-            << "Module Id                  : 2 bytes" << '\n'
-            << "Row                        : 2 bytes" << '\n'
-            << "Column                     : 2 bytes" << '\n'
-            << "Reserved                   : 2 bytes" << '\n'
-            << "Debug                      : 4 bytes" << '\n'
-            << "Round Robin Number         : 2 bytes" << '\n'
-            << "Detector Type              : 1 byte" << '\n'
-            << "Header Version             : 1 byte" << '\n'
-            << "Packets Caught Mask        : 64 bytes" << '\n';
-
-        std::string message = oss.str();
-
-        // writing to file
-        if (fwrite((void *)message.c_str(), 1, message.length(), fd) !=
-            message.length()) {
-            throw sls::RuntimeError(
-                "Master binary file incorrect number of bytes written to file");
-        }
-    };
-
+    MasterAttributes() = default;
+    virtual ~MasterAttributes() = default;
+    virtual void WriteMasterBinaryAttributes(FILE *fd);
+    std::string GetBinaryMasterAttributes();
+    void WriteBinaryAttributes(FILE *fd, std::string message);
+    void WriteFinalBinaryAttributes(FILE *fd);
 #ifdef HDF5C
-    virtual void WriteMasterHDF5Attributes(H5File *fd, Group *group) {
-        LOG(logERROR) << "WriteMasterHdf5Attributes should have been called "
-                         "by a child class";
-    };
-
-    void WriteHDF5Attributes(H5File *fd, Group *group) {
-        char c[1024];
-        memset(c, 0, sizeof(c));
-        // clang-format off
-        // version
-        {
-            double version = BINARY_WRITER_VERSION;
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            Attribute attribute = fd->createAttribute(
-                "Version", PredType::NATIVE_DOUBLE, dataspace);
-            attribute.write(PredType::NATIVE_DOUBLE, &version);
-        }
-        // timestamp
-        {
-            time_t t = time(nullptr);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset =
-            group->createDataSet("Timestamp", strdatatype, dataspace);
-            sls::strcpy_safe(c, std::string(ctime(&t)));
-            dataset.write(c, strdatatype);
-        }
-        // detector type
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-            group->createDataSet("Detector Type", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(detType));
-            dataset.write(c, strdatatype);
-        }
-        // timing mode
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-            group->createDataSet("Timing Mode", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(timingMode));
-            dataset.write(c, strdatatype);
-        }
-        // Image Size
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Image Size", PredType::NATIVE_INT, dataspace);
-            dataset.write(&imageSize, PredType::NATIVE_INT);
-            DataSpace dataspaceAttr = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            Attribute attribute =
-            dataset.createAttribute("Unit", strdatatype, dataspaceAttr);
-            sls::strcpy_safe(c, "bytes");
-            attribute.write(strdatatype, c);
-        }
-        //TODO: make this into an array?
-        // x
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Number of pixels in x axis", PredType::NATIVE_INT, dataspace);
-            dataset.write(&nPixels.x, PredType::NATIVE_INT);
-        }
-        // y
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Number of pixels in y axis", PredType::NATIVE_INT, dataspace);
-            dataset.write(&nPixels.y, PredType::NATIVE_INT);
-        }
-        // Maximum frames per file
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Maximum frames per file", PredType::NATIVE_INT, dataspace);
-            dataset.write(&maxFramesPerFile, PredType::NATIVE_INT);
-        }
-        // Frame Discard Policy
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-            group->createDataSet("Frame Discard Policy", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(frameDiscardMode));
-            dataset.write(c, strdatatype);
-        }        
-        // Frame Padding
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Frame Padding", PredType::NATIVE_INT, dataspace);
-            dataset.write(&framePadding, PredType::NATIVE_INT);
-        }
-        // Scan Parameters
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-            group->createDataSet("Scan Parameters", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(scanParams));
-            dataset.write(c, strdatatype);
-        }   
-        // Total Frames
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Total Frames", PredType::STD_U64LE, dataspace);
-            dataset.write(&totalFrames, PredType::STD_U64LE);
-        }
-    };
-
-    void WriteFinalHDF5Attributes(H5File *fd, Group *group) {
-        char c[1024];
-        memset(c, 0, sizeof(c));
-        // Total Frames in file
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Frames in File", PredType::STD_U64LE, dataspace);
-            dataset.write(&framesInFile, PredType::STD_U64LE);
-        }
-        // additional json header
-        if (!additionalJsonHeader.empty()) {
-            std::string json = sls::ToString(additionalJsonHeader);
-            StrType strdatatype(PredType::C_S1, json.length());
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset =
-            group->createDataSet("Additional JSON Header", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(additionalJsonHeader));
-            dataset.write(c, strdatatype);
-        }
-    };
-
-    void WriteHDF5Exptime(H5File *fd, Group *group) {
-        DataSpace dataspace = DataSpace(H5S_SCALAR);
-        StrType strdatatype(PredType::C_S1, 256);
-        DataSet dataset =
-        group->createDataSet("Exposure Time", strdatatype, dataspace);
-        char c[1024];
-        memset(c, 0, sizeof(c));
-        sls::strcpy_safe(c, sls::ToString(exptime));
-        dataset.write(c, strdatatype);
-    };
-
-    void WriteHDF5Period(H5File *fd, Group *group) {
-        DataSpace dataspace = DataSpace(H5S_SCALAR);
-        StrType strdatatype(PredType::C_S1, 256);
-        DataSet dataset =
-        group->createDataSet("Acquisition Period", strdatatype, dataspace);
-        char c[1024];
-        memset(c, 0, sizeof(c));
-        sls::strcpy_safe(c, sls::ToString(period));
-        dataset.write(c, strdatatype);
-    };
-
-    void WriteHDF5DynamicRange(H5File *fd, Group *group) {
-        DataSpace dataspace = DataSpace(H5S_SCALAR);
-        DataSet dataset = group->createDataSet(
-            "Dynamic Range", PredType::NATIVE_INT, dataspace);
-        dataset.write(&dynamicRange, PredType::NATIVE_INT);
-        DataSpace dataspaceAttr = DataSpace(H5S_SCALAR);
-        StrType strdatatype(PredType::C_S1, 256);
-        Attribute attribute =
-        dataset.createAttribute("Unit", strdatatype, dataspaceAttr);
-        char c[1024] = "bits";
-        attribute.write( strdatatype, c);
-    };
-
-    void WriteHDF5TenGiga(H5File *fd, Group *group) {
-        DataSpace dataspace = DataSpace(H5S_SCALAR);
-        DataSet dataset = group->createDataSet(
-            "Ten Giga Enable", PredType::NATIVE_INT, dataspace);
-        dataset.write(&tenGiga, PredType::NATIVE_INT);
-    };
+    virtual void WriteMasterHDF5Attributes(H5File *fd, Group *group);
+    void WriteHDF5Attributes(H5File *fd, Group *group);
+    void WriteFinalHDF5Attributes(H5File *fd, Group *group);
+    void WriteHDF5Exptime(H5File *fd, Group *group);
+    void WriteHDF5Period(H5File *fd, Group *group);
+    void WriteHDF5DynamicRange(H5File *fd, Group *group);
+    void WriteHDF5TenGiga(H5File *fd, Group *group);
 #endif
 };
-// clang-format on
 
 class GotthardMasterAttributes : public MasterAttributes {
   public:
-    GotthardMasterAttributes(){};
-
-    void WriteMasterBinaryAttributes(FILE *fd) override {
-        std::ostringstream oss;
-        oss << MasterAttributes::GetBinaryMasterAttributes()
-            << "Exptime                    : " << sls::ToString(exptime) << '\n'
-            << "Period                     : " << sls::ToString(period) << '\n'
-            << "Roi (xmin, xmax)           : " << sls::ToString(roi) << '\n';
-        std::string message = oss.str();
-        MasterAttributes::WriteBinaryAttributes(fd, message);
-    };
-
+    GotthardMasterAttributes() = default;
+    void WriteMasterBinaryAttributes(FILE *fd) override;
 #ifdef HDF5C
-    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override {
-        MasterAttributes::WriteHDF5Attributes(fd, group);
-        MasterAttributes::WriteHDF5Exptime(fd, group);
-        MasterAttributes::WriteHDF5Period(fd, group);
-        // Roi xmin
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "roi xmin", PredType::NATIVE_INT, dataspace);
-            dataset.write(&roi.xmin, PredType::NATIVE_INT);
-        }
-        // Roi xmax
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "roi xmax", PredType::NATIVE_INT, dataspace);
-            dataset.write(&roi.xmax, PredType::NATIVE_INT);
-        }
-    };
+    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override;
 #endif
 };
 
 class JungfrauMasterAttributes : public MasterAttributes {
   public:
-    JungfrauMasterAttributes(){};
-
-    void WriteMasterBinaryAttributes(FILE *fd) override {
-        std::ostringstream oss;
-        oss << MasterAttributes::GetBinaryMasterAttributes()
-            << "Exptime                    : " << sls::ToString(exptime) << '\n'
-            << "Period                     : " << sls::ToString(period) << '\n'
-            << "Number of UDP Interfaces   : " << numUDPInterfaces << '\n'
-            << "Number of rows             : " << readNRows << '\n';
-        std::string message = oss.str();
-        MasterAttributes::WriteBinaryAttributes(fd, message);
-    };
-
+    JungfrauMasterAttributes() = default;
+    void WriteMasterBinaryAttributes(FILE *fd) override;
 #ifdef HDF5C
-    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override {
-        MasterAttributes::WriteHDF5Attributes(fd, group);
-        MasterAttributes::WriteHDF5Exptime(fd, group);
-        MasterAttributes::WriteHDF5Period(fd, group);
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Number of UDP Interfaces", PredType::NATIVE_INT, dataspace);
-            dataset.write(&numUDPInterfaces, PredType::NATIVE_INT);
-        }
-        // readNRows
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Number of rows", PredType::NATIVE_INT, dataspace);
-            dataset.write(&readNRows, PredType::NATIVE_INT);
-        }
-    };
+    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override;
 #endif
 };
 
 class EigerMasterAttributes : public MasterAttributes {
   public:
-    EigerMasterAttributes(){};
-
-    void WriteMasterBinaryAttributes(FILE *fd) override {
-        std::ostringstream oss;
-        oss << MasterAttributes::GetBinaryMasterAttributes()
-            << "Dynamic Range              : " << dynamicRange << '\n'
-            << "Ten Giga                   : " << tenGiga << '\n'
-            << "Exptime                    : " << sls::ToString(exptime) << '\n'
-            << "Period                     : " << sls::ToString(period) << '\n'
-            << "Threshold Energy           : " << thresholdEnergyeV << '\n'
-            << "SubExptime                 : " << sls::ToString(subExptime)
-            << '\n'
-            << "SubPeriod                  : " << sls::ToString(subPeriod)
-            << '\n'
-            << "Quad                       : " << quad << '\n'
-            << "Number of rows             : " << readNRows << '\n'
-            << "Rate Corrections           : " << sls::ToString(ratecorr)
-            << '\n';
-        std::string message = oss.str();
-        MasterAttributes::WriteBinaryAttributes(fd, message);
-    };
-
+    EigerMasterAttributes() = default;
+    void WriteMasterBinaryAttributes(FILE *fd) override;
 #ifdef HDF5C
-    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override {
-        MasterAttributes::WriteHDF5Attributes(fd, group);
-        MasterAttributes::WriteHDF5DynamicRange(fd, group);
-        MasterAttributes::WriteHDF5TenGiga(fd, group);
-        MasterAttributes::WriteHDF5Exptime(fd, group);
-        MasterAttributes::WriteHDF5Period(fd, group);
-        char c[1024];
-        memset(c, 0, sizeof(c));
-        // threshold
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Threshold Energy", PredType::NATIVE_INT, dataspace);
-            dataset.write(&thresholdEnergyeV, PredType::NATIVE_INT);
-            DataSpace dataspaceAttr = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            Attribute attribute =
-                dataset.createAttribute("Unit", strdatatype, dataspaceAttr);
-            sls::strcpy_safe(c, "eV");
-            attribute.write(strdatatype, c);
-        }
-        // SubExptime
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset = group->createDataSet("Sub Exposure Time",
-                                                   strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(subExptime));
-            dataset.write(c, strdatatype);
-        }
-        // SubPeriod
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-                group->createDataSet("Sub Period", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(subPeriod));
-            dataset.write(c, strdatatype);
-        }
-        // Quad
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset =
-                group->createDataSet("Quad", PredType::NATIVE_INT, dataspace);
-            dataset.write(&quad, PredType::NATIVE_INT);
-        }
-        // readNRows
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Number of rows", PredType::NATIVE_INT, dataspace);
-            dataset.write(&readNRows, PredType::NATIVE_INT);
-        }
-        // Rate corrections
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 1024);
-            DataSet dataset = group->createDataSet("Rate Corrections",
-                                                   strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(ratecorr));
-            dataset.write(c, strdatatype);
-        }
-    };
+    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override;
 #endif
 };
 
 class Mythen3MasterAttributes : public MasterAttributes {
   public:
-    Mythen3MasterAttributes(){};
-
-    void WriteMasterBinaryAttributes(FILE *fd) override {
-        std::ostringstream oss;
-        oss << MasterAttributes::GetBinaryMasterAttributes()
-            << "Dynamic Range              : " << dynamicRange << '\n'
-            << "Ten Giga                   : " << tenGiga << '\n'
-            << "Period                     : " << sls::ToString(period) << '\n'
-            << "Counter Mask               : " << sls::ToStringHex(counterMask)
-            << '\n'
-            << "Exptime1                   : " << sls::ToString(exptime1)
-            << '\n'
-            << "Exptime2                   : " << sls::ToString(exptime2)
-            << '\n'
-            << "Exptime3                   : " << sls::ToString(exptime3)
-            << '\n'
-            << "GateDelay1                 : " << sls::ToString(gateDelay1)
-            << '\n'
-            << "GateDelay2                 : " << sls::ToString(gateDelay2)
-            << '\n'
-            << "GateDelay3                 : " << sls::ToString(gateDelay3)
-            << '\n'
-            << "Gates                      : " << gates << '\n'
-            << "Threshold Energies         : "
-            << sls::ToString(thresholdAllEnergyeV) << '\n';
-        std::string message = oss.str();
-        MasterAttributes::WriteBinaryAttributes(fd, message);
-    };
-
+    Mythen3MasterAttributes() = default;
+    void WriteMasterBinaryAttributes(FILE *fd) override;
 #ifdef HDF5C
-    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override {
-        MasterAttributes::WriteHDF5Attributes(fd, group);
-        MasterAttributes::WriteHDF5DynamicRange(fd, group);
-        MasterAttributes::WriteHDF5TenGiga(fd, group);
-        MasterAttributes::WriteHDF5Period(fd, group);
-        char c[1024];
-        memset(c, 0, sizeof(c));
-        // Counter Mask
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Counter Mask", PredType::STD_U32LE, dataspace);
-            dataset.write(&counterMask, PredType::STD_U32LE);
-        }
-        // Exptime1
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-                group->createDataSet("Exposure Time1", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(exptime1));
-            dataset.write(c, strdatatype);
-        }
-        // Exptime2
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-                group->createDataSet("Exposure Time2", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(exptime2));
-            dataset.write(c, strdatatype);
-        }
-        // Exptime3
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-                group->createDataSet("Exposure Time3", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(exptime3));
-            dataset.write(c, strdatatype);
-        }
-        // GateDelay1
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-                group->createDataSet("Gate Delay1", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(gateDelay1));
-            dataset.write(c, strdatatype);
-        }
-        // GateDelay2
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-                group->createDataSet("Gate Delay2", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(gateDelay2));
-            dataset.write(c, strdatatype);
-        }
-        // GateDelay3
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-                group->createDataSet("Gate Delay3", strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(gateDelay3));
-            dataset.write(c, strdatatype);
-        }
-        // Gates
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset =
-                group->createDataSet("Gates", PredType::STD_U32LE, dataspace);
-            dataset.write(&gates, PredType::STD_U32LE);
-        }
-        // Threshold Energies
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 1024);
-            DataSet dataset = group->createDataSet("Threshold Energies",
-                                                   strdatatype, dataspace);
-            sls::strcpy_safe(c, sls::ToString(thresholdAllEnergyeV));
-            dataset.write(c, strdatatype);
-        }
-    };
+    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override;
 #endif
 };
 
 class Gotthard2MasterAttributes : public MasterAttributes {
   public:
-    Gotthard2MasterAttributes(){};
-
-    void WriteMasterBinaryAttributes(FILE *fd) override {
-        std::ostringstream oss;
-        oss << MasterAttributes::GetBinaryMasterAttributes()
-            << "Exptime                    : " << sls::ToString(exptime) << '\n'
-            << "Period                     : " << sls::ToString(period) << '\n'
-            << "Burst Mode                 : " << sls::ToString(burstMode)
-            << '\n';
-        std::string message = oss.str();
-        MasterAttributes::WriteBinaryAttributes(fd, message);
-    };
-
+    Gotthard2MasterAttributes() = default;
+    void WriteMasterBinaryAttributes(FILE *fd) override;
 #ifdef HDF5C
-    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override {
-        MasterAttributes::WriteHDF5Attributes(fd, group);
-        MasterAttributes::WriteHDF5Exptime(fd, group);
-        MasterAttributes::WriteHDF5Period(fd, group);
-        // burst mode
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            StrType strdatatype(PredType::C_S1, 256);
-            DataSet dataset =
-                group->createDataSet("Burst Mode", strdatatype, dataspace);
-            char c[1024];
-            memset(c, 0, sizeof(c));
-            sls::strcpy_safe(c, sls::ToString(burstMode));
-            dataset.write(c, strdatatype);
-        }
-    };
+    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override;
 #endif
 };
 
 class MoenchMasterAttributes : public MasterAttributes {
   public:
-    MoenchMasterAttributes(){};
-
-    void WriteMasterBinaryAttributes(FILE *fd) override {
-        std::ostringstream oss;
-        oss << MasterAttributes::GetBinaryMasterAttributes()
-            << "Exptime                    : " << sls::ToString(exptime) << '\n'
-            << "Period                     : " << sls::ToString(period) << '\n'
-            << "Ten Giga                   : " << tenGiga << '\n'
-            << "ADC Mask                   : " << sls::ToStringHex(adcmask)
-            << '\n'
-            << "Analog Samples             : " << analogSamples << '\n';
-        std::string message = oss.str();
-        MasterAttributes::WriteBinaryAttributes(fd, message);
-    };
-
+    MoenchMasterAttributes() = default;
+    void WriteMasterBinaryAttributes(FILE *fd) override;
 #ifdef HDF5C
-    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override {
-        MasterAttributes::WriteHDF5Attributes(fd, group);
-        MasterAttributes::WriteHDF5Exptime(fd, group);
-        MasterAttributes::WriteHDF5Period(fd, group);
-        MasterAttributes::WriteHDF5TenGiga(fd, group);
-        // ADC Mask
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "ADC Mask", PredType::NATIVE_INT, dataspace);
-            dataset.write(&adcmask, PredType::NATIVE_INT);
-        }
-        // Analog Samples
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Analog Samples", PredType::NATIVE_INT, dataspace);
-            dataset.write(&analogSamples, PredType::NATIVE_INT);
-        }
-    };
+    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override;
 #endif
 };
 
 class CtbMasterAttributes : public MasterAttributes {
   public:
-    CtbMasterAttributes(){};
-
-    void WriteMasterBinaryAttributes(FILE *fd) override {
-        std::ostringstream oss;
-        oss << MasterAttributes::GetBinaryMasterAttributes()
-            << "Exptime                    : " << sls::ToString(exptime) << '\n'
-            << "Period                     : " << sls::ToString(period) << '\n'
-            << "Ten Giga                   : " << tenGiga << '\n'
-            << "ADC Mask                   : " << sls::ToStringHex(adcmask)
-            << '\n'
-            << "Analog Flag                : " << analog << '\n'
-            << "Analog Samples             : " << analogSamples << '\n'
-            << "Digital Flag               : " << digital << '\n'
-            << "Digital Samples            : " << digitalSamples << '\n'
-            << "Dbit Offset                : " << dbitoffset << '\n'
-            << "Dbit Bitset                : " << dbitlist << '\n';
-        std::string message = oss.str();
-        MasterAttributes::WriteBinaryAttributes(fd, message);
-    };
-
+    CtbMasterAttributes() = default;
+    void WriteMasterBinaryAttributes(FILE *fd) override;
 #ifdef HDF5C
-    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override {
-        MasterAttributes::WriteHDF5Attributes(fd, group);
-        MasterAttributes::WriteHDF5Exptime(fd, group);
-        MasterAttributes::WriteHDF5Period(fd, group);
-        MasterAttributes::WriteHDF5TenGiga(fd, group);
-        // ADC Mask
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "ADC mMsk", PredType::NATIVE_INT, dataspace);
-            dataset.write(&adcmask, PredType::NATIVE_INT);
-        }
-        // Analog Flag
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Analog Flag", PredType::NATIVE_INT, dataspace);
-            dataset.write(&analog, PredType::NATIVE_INT);
-        }
-        // Analog Samples
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Analog Samples", PredType::NATIVE_INT, dataspace);
-            dataset.write(&analogSamples, PredType::NATIVE_INT);
-        }
-        // Digital Flag
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Digital Flag", PredType::NATIVE_INT, dataspace);
-            dataset.write(&digital, PredType::NATIVE_INT);
-        }
-        // Digital Samples
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Digital Samples", PredType::NATIVE_INT, dataspace);
-            dataset.write(&digitalSamples, PredType::NATIVE_INT);
-        }
-        // Dbit Offset
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Dbit Offset", PredType::NATIVE_INT, dataspace);
-            dataset.write(&dbitoffset, PredType::NATIVE_INT);
-        }
-        // Dbit List
-        {
-            DataSpace dataspace = DataSpace(H5S_SCALAR);
-            DataSet dataset = group->createDataSet(
-                "Dbit Bitset List", PredType::STD_U64LE, dataspace);
-            dataset.write(&dbitlist, PredType::STD_U64LE);
-        }
-    };
+    void WriteMasterHDF5Attributes(H5File *fd, Group *group) override;
 #endif
 };

slsReceiverSoftware/src/receiver_defs.h

@@ -17,8 +17,8 @@
 // files
 
 // versions
-#define HDF5_WRITER_VERSION   (6.3) // 1 decimal places
-#define BINARY_WRITER_VERSION (6.3) // 1 decimal places
+#define HDF5_WRITER_VERSION   (6.4) // 1 decimal places
+#define BINARY_WRITER_VERSION (6.4) // 1 decimal places
 
 #define MAX_FRAMES_PER_FILE           20000
 #define SHORT_MAX_FRAMES_PER_FILE     100000

slsReceiverSoftware/tests/test-CircularFifo.cpp

@@ -34,8 +34,8 @@ TEST_CASE("Push pop") {
     for (size_t i = 0; i != vec.size(); ++i) {
         fifo.push(p);
         ++p;
-        CHECK(fifo.getDataValue() == i + 1);
-        CHECK(fifo.getFreeValue() == 4 - i);
+        CHECK(fifo.getDataValue() == (int)(i + 1));
+        CHECK(fifo.getFreeValue() == (int)(4 - i));
     }
 
     CHECK(fifo.isEmpty() == false);
@@ -44,8 +44,8 @@ TEST_CASE("Push pop") {
     for (size_t i = 0; i != vec.size(); ++i) {
         fifo.pop(p);
         CHECK(*p == vec[i]);
-        CHECK(fifo.getDataValue() == 4 - i);
-        CHECK(fifo.getFreeValue() == i + 1);
+        CHECK(fifo.getDataValue() == (int)(4 - i));
+        CHECK(fifo.getFreeValue() == (int)(i + 1));
     }
 
     CHECK(fifo.isEmpty() == true);

slsSupportLib/include/sls/sls_detector_funcs.h

@@ -258,6 +258,9 @@ enum detFuncs {
     F_UPDATE_DETECTOR_SERVER,
     F_GET_UPDATE_MODE,
     F_SET_UPDATE_MODE,
+    F_SET_MASTER,
+    F_GET_TOP,
+    F_SET_TOP,
 
     NUM_DET_FUNCTIONS,
     RECEIVER_ENUM_START = 256, /**< detector function should not exceed this
@@ -619,6 +622,9 @@ const char* getFunctionNameFromEnum(enum detFuncs func) {
     case F_UPDATE_DETECTOR_SERVER:          return "F_UPDATE_DETECTOR_SERVER";
     case F_GET_UPDATE_MODE:                 return "F_GET_UPDATE_MODE";
     case F_SET_UPDATE_MODE:                 return "F_SET_UPDATE_MODE";
+    case F_SET_MASTER:                      return "F_SET_MASTER";
+    case F_GET_TOP:                         return "F_GET_TOP";
+    case F_SET_TOP:                         return "F_SET_TOP";
 
     case NUM_DET_FUNCTIONS:              	return "NUM_DET_FUNCTIONS";
     case RECEIVER_ENUM_START:				return "RECEIVER_ENUM_START";

slsSupportLib/include/sls/versionAPI.h

@@ -6,10 +6,10 @@
 #define APIRECEIVER 0x211124
 #define APIGUI 0x211124
 
-#define APICTB 0x220223
-#define APIGOTTHARD 0x220223
-#define APIGOTTHARD2 0x220223
-#define APIJUNGFRAU 0x220223
-#define APIMYTHEN3 0x220223
-#define APIMOENCH 0x220223
-#define APIEIGER 0x220223
+#define APIEIGER 0x220324
+#define APICTB 0x220328
+#define APIGOTTHARD 0x220328
+#define APIGOTTHARD2 0x220328
+#define APIJUNGFRAU 0x220328
+#define APIMYTHEN3 0x220328
+#define APIMOENCH 0x220328