common mode subtraction now works for moench - bad channel mask added to the data structure

git-svn-id: file:///afs/psi.ch/project/sls_det_software/svn/slsDetectorCalibration@10 113b152e-814d-439b-b186-022a431db7b5
This commit is contained in:
bergamaschi
2013-12-04 11:12:13 +00:00
parent 4f7c6f633f
commit b8462e24ef
4 changed files with 116 additions and 33 deletions

View File

@ -1,7 +1,7 @@
class MovingStat
{
public:
MovingStat() : m_n(0), n(0) {}
MovingStat() : m_n(0), n(1000) {}
void Clear()
{

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@ -126,31 +126,42 @@ class moench02ModuleData : public slsDetectorData {
for (ix=xmin-1; ix<xmax+1; ix++) {
isc=ix/40;
for (iy=ymin-1; iy<ymax+1; iy++) {
if (getEventType(ix, iy, hc, tc, 1)==PEDESTAL) {
cmPed[isc]+=getChannelShort(ix, iy, hc, tc);
nCm[isc]++;
if (isGood(ix,iy)) {
if (getEventType(ix, iy, hc, tc, 1,0)==PEDESTAL) {
cmPed[isc]+=getChannelShort(ix, iy, hc, tc);
nCm[isc]++;
}
}
}
}
for (isc=scmin; isc<scmax; isc++) {
if (nCm[isc]>0)
cmStat[isc].Calc(cmPed[isc]/nCm[isc]);
}
// cout << "SC " << isc << nCm[isc] << " " << cmPed[isc]/nCm[isc] << " " << cmStat[isc].Mean() << endl;
}
};
double getCommonMode(int ix, int iy) {
int isc=ix/40;
if (nCm[isc]>0)
if (nCm[isc]>0) {
/* if (ix==20 && iy==20) */
/* cout << cmPed[isc] << " " << nCm[isc] << " " << cmStat[isc].Mean() << " " << cmPed[isc]/nCm[isc]-cmStat[isc].Mean() << endl; */
return cmPed[isc]/nCm[isc]-cmStat[isc].Mean();
else
} else {
/* if (ix==20 && iy==20) */
/* cout << "No common mode!" << endl; */
return 0;
}
};
@ -221,7 +232,7 @@ class moench02ModuleData : public slsDetectorData {
char *getBuff(){return buff;}
char *getOldBuff(){return oldbuff;}
int setPedestalSubstraction(int i=-1){if (i==0) pedSub=0; if (i==1) pedSub=1; return pedSub;};
int setPedestalSubstraction(int i=-1){if (i>=0) pedSub=i; return pedSub;};
double getChannelShort(int ix, int iy, double hc=0, double tc=0) {
@ -240,7 +251,7 @@ class moench02ModuleData : public slsDetectorData {
eventType getEventType(int ix, int iy, double hcorr=0, double tcorr=0, int sign=1) {
eventType getEventType(int ix, int iy, double hcorr=0, double tcorr=0, int sign=1, int cm=0) {
/* PEDESTAL, */
/* NEIGHBOUR, */
@ -256,9 +267,11 @@ class moench02ModuleData : public slsDetectorData {
for (int ir=-1; ir<2; ir++) {
for (int ic=-1; ic<2; ic ++) {
if ((iy+ir)>=0 && (iy+ir)<160 && (ix+ic)>=0 && (ix+ic)<160) {
v=getChannelShort(ix+ic, iy+ir, hcorr, tcorr);
v=sign*getChannelShort(ix+ic, iy+ir, hcorr, tcorr);
if (pedSub)
v=sign*(v-getPedestal(ix+ic,iy+ir));
v-=sign*getPedestal(ix+ic,iy+ir);
if (cm)
v-=sign*getCommonMode(ix+ic, iy+ic);
cluster[ic+1][ir+1]=v;
tot+=v;
if (v>max) {
@ -290,10 +303,7 @@ class moench02ModuleData : public slsDetectorData {
};
double getClusterElement(int ic, int ir, int cm=0){
if (cm) cluster[ic+1][ir+1]-getCommonMode(cx,cy);
else return cluster[ic+1][ir+1];
};
double getClusterElement(int ic, int ir, int cmsub=0){return cluster[ic+1][ir+1];};
double *getCluster(){return &cluster[0][0];};

View File

@ -10,9 +10,9 @@
#include <THStack.h>
#include <TCanvas.h>
#include <stdio.h>
#include <deque>
#include <list>
#include <queue>
//#include <deque>
//#include <list>
//#include <queue>
#include <fstream>
#include "moench02ModuleData.h"
@ -23,7 +23,14 @@ using namespace std;
#define NC 160
#define NR 160
#define MY_DEBUG 1
#ifdef MY_DEBUG
#include <TCanvas.h>
#endif
/**
char *fformat, file name format
char *tit, title of the tree etc.
int runmin, minimum run number
@ -67,6 +74,9 @@ THStack *moenchReadData(char *fformat, char *tit, int runmin, int runmax, int nb
THStack *hs=new THStack("hs",fformat);
int iev=0;
TH2F *h1=new TH2F("h1",tit,nbins,hmin-0.5,hmax-0.5,NC*NR,-0.5,NC*NR-0.5);
hs->Add(h1);
@ -106,6 +116,14 @@ THStack *moenchReadData(char *fformat, char *tit, int runmin, int runmax, int nb
// 6% x-talk from previous pixel
// 12% x-talk from previous frame
#ifdef MY_DEBUG
TCanvas *myC=new TCanvas();
TH2F *he=new TH2F("he","Event",3,-1.5,1.5,3,-1.5,1.5);
he->SetStats(kFALSE);
he->Draw("colz");
he->SetMinimum(0);
he->SetMaximum(0.5*hmax);
#endif
for (int irun=runmin; irun<runmax; irun++) {
sprintf(fname,fformat,irun);
@ -119,9 +137,13 @@ THStack *moenchReadData(char *fformat, char *tit, int runmin, int runmax, int nb
if (nf>100) {
if (cmsub) {
for (int isc=scmin; isc<scmax; isc++) {
decoder->calculateCommonMode(3+isc*40, 40*(isc-1)-3, 3, NR-3, hc, tc);
decoder->calculateCommonMode(3+isc*40, 40*(isc+1)-3, 3, NR-3, hc, tc);
#ifdef MY_DEBUG
if (nf%1000==0) cout << "sc=" << isc << " CM="<< decoder->getCommonMode(3+isc*40, NR/2)<< endl;
#endif
}
}
}
@ -134,7 +156,7 @@ THStack *moenchReadData(char *fformat, char *tit, int runmin, int runmax, int nb
if (nf>100) {
thisEvent= decoder->getEventType(ix, iy, hc, tc, 1);
thisEvent= decoder->getEventType(ix, iy, hc, tc, 1,1);
}
@ -142,10 +164,11 @@ THStack *moenchReadData(char *fformat, char *tit, int runmin, int runmax, int nb
if (thisEvent==moench02ModuleData::PEDESTAL) {
if (cmsub && nf>1000)
decoder->addToPedestal( decoder->getChannelShort(ix, iy, hc, tc)- decoder->getCommonMode(ix,iy), ix, iy);
decoder->addToPedestal(decoder->getChannelShort(ix, iy, hc, tc)-decoder->getCommonMode(ix,iy), ix, iy);
else
decoder->addToPedestal( decoder->getChannelShort(ix, iy, hc, tc), ix, iy);
}
@ -159,15 +182,30 @@ Add here the function that you want to call: fill histos, make trees etc.
tr=0;
bl=0;
br=0;
h1->Fill(decoder->getClusterElement(0,0, cmsub), iy+NR*ix);
h1->Fill(decoder->getClusterElement(0,0), iy+NR*ix);
// if (nf%1000==0 && ix==20 && iy==20) cout << " val="<< decoder->getClusterElement(0,0)<< endl;
if (thisEvent==moench02ModuleData::PHOTON_MAX ) {
#ifdef MY_DEBUG
if (iev%100000==0) {
cout << "Event " << iev << " Frame "<< nf << endl;
}
#endif
for (ir=-1; ir<2; ir++) {
for (ic=-1; ic<2; ic++) {
v=decoder->getClusterElement(ic,ir,cmsub);
data[ic+1][ir+1]=v;
#ifdef MY_DEBUG
if (iev%100000==0) {
he->SetBinContent(ic+2,ir+2,v);
cout << "Histo("<< ix+ic << ","<< iy+ir <<")" << v << endl;
}
#endif
tot+=v;
if (ir<1) {
@ -237,7 +275,16 @@ Add here the function that you want to call: fill histos, make trees etc.
y=iy;
tall->Fill();
#ifdef MY_DEBUG
if (iev%100000==0) {
myC->Modified();
myC->Update();
}
#endif
iev++;
}

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@ -19,9 +19,7 @@ class slsDetectorData {
*/
slsDetectorData(int npx, int npy=1, int ds=-1, int **dMap=NULL, int **dMask=NULL) {
nx=npx;
ny=npy;
slsDetectorData(int npx, int npy=1, int ds=-1, int **dMap=NULL, int **dMask=NULL, int **dROI=NULL): nx(npx), ny(npy) {
if (ds<=0)
dataSize=nx*ny;
@ -37,8 +35,14 @@ class slsDetectorData {
dataMap[i] = new int[nx];
}
dataROIMask=new int*[ny];
for(int i = 0; i < ny; i++) {
dataROIMask[i] = new int[nx];
}
setDataMap(dMap);
setDataMask(dMask);
setDataROIMask(dROI);
};
@ -46,9 +50,11 @@ class slsDetectorData {
for(int i = 0; i < ny; i++) {
delete [] dataMap[i];
delete [] dataMask[i];
delete [] dataROIMask[i];
}
delete [] dataMap;
delete [] dataMask;
delete [] dataROIMask;
}
void setDataMap(int **dMap=NULL) {
@ -76,8 +82,27 @@ class slsDetectorData {
}
};
void setDataROIMask(int **dROI=NULL){
if (dROI!=NULL) {
for (int iy=0; iy<ny; iy++)
for (int ix=0; ix<nx; ix++)
dataROIMask[iy][ix]=dROI[iy][ix];
} else {
for (int iy=0; iy<ny; iy++)
for (int ix=0; ix<nx; ix++)
dataROIMask[iy][ix]=1;
}
};
int setBad(int ix, int iy, int i=1) {dataROIMask[iy][ix]=i; return isGood(ix,iy);};
int isGood(int ix, int iy) {return dataROIMask[iy][ix];};
/**
@ -117,11 +142,12 @@ class slsDetectorData {
private:
int nx; /**< Number of pixels in the x direction */
int ny; /**< Number of pixels in the y direction */
const int nx; /**< Number of pixels in the x direction */
const int ny; /**< Number of pixels in the y direction */
int dataSize; /**< Size of a dataset */
int **dataMap; /**< Array of size nx*ny storing the pointers to the data in the dataset (as offset)*/
int **dataMask; /**< Array of size nx*ny storing the polarity of the data in the dataset (should be 0 if no inversion is required, 0xffffffff is inversion is required */
int **dataMask; /**< Array of size nx*ny storing the polarity of the data in the dataset (should be 0 if no inversion is required, 0xffffffff is inversion is required) */
int **dataROIMask; /**< Array of size nx*ny 1 if channel is good (or in the ROI), 0 if bad channel (or out of ROI) */
};