aare::ClusterFinder< T > Class Template Reference

#include <VariableSizeClusterFinder.hpp>

Data Structures
struct	Hit

Public Member Functions
	ClusterFinder (image_shape shape, T threshold)
NDArray< int, 2 >	labeled ()
void	set_noiseMap (NDView< T, 2 > noise_map)
void	set_peripheralThresholdFactor (int factor)
void	find_clusters (NDView< T, 2 > img)
void	find_clusters_X (NDView< T, 2 > img)
void	rec_FillHit (int clusterIndex, int i, int j)
void	single_pass (NDView< T, 2 > img)
void	first_pass ()
void	second_pass ()
void	store_clusters ()
std::vector< Hit >	steal_hits ()
void	clear_hits ()
void	print_connections ()
size_t	total_clusters () const

Private Member Functions
int	check_neighbours (int i, int j)
void	add_link (int from, int to)

Private Attributes
const std::array< ssize_t, 2 >	shape_
NDView< T, 2 >	original_
NDArray< int, 2 >	labeled_
NDArray< int, 2 >	peripheral_labeled_
NDArray< bool, 2 >	binary_
T	threshold_
NDView< T, 2 >	noiseMap
bool	use_noise_map = false
int	peripheralThresholdFactor_ = 5
int	current_label
const std::array< int, 4 >	di {{0, -1, -1, -1}}
const std::array< int, 4 >	dj {{-1, -1, 0, 1}}
const std::array< int, 8 >	di_ {{0, 0, -1, 1, -1, 1, -1, 1}}
const std::array< int, 8 >	dj_ {{-1, 1, 0, 0, 1, -1, -1, 1}}
std::map< int, int >	child
std::unordered_map< int, Hit >	h_size
std::vector< Hit >	hits

Constructor & Destructor Documentation

ClusterFinder()

template<typename T >

aare::ClusterFinder< T >::ClusterFinder ( image_shape  shape, T  threshold  )

inline

Member Function Documentation

add_link()

template<typename T >

void aare::ClusterFinder< T >::add_link ( int  from, int  to  )

inlineprivate

check_neighbours()

template<typename T >

int aare::ClusterFinder< T >::check_neighbours ( int  i, int  j  )

private

clear_hits()

template<typename T >

void aare::ClusterFinder< T >::clear_hits ( )

inline

find_clusters()

template<typename T >

void aare::ClusterFinder< T >::find_clusters

(

NDView< T, 2 >

img

)

find_clusters_X()

template<typename T >

void aare::ClusterFinder< T >::find_clusters_X

(

NDView< T, 2 >

img

)

first_pass()

template<typename T >

void aare::ClusterFinder< T >::first_pass

labeled()

template<typename T >

NDArray< int, 2 > aare::ClusterFinder< T >::labeled ( )

inline

print_connections()

template<typename T >

void aare::ClusterFinder< T >::print_connections ( )

inline

rec_FillHit()

template<typename T >

void aare::ClusterFinder< T >::rec_FillHit	(	int	clusterIndex,
		int	i,
		int	j
	)

second_pass()

template<typename T >

void aare::ClusterFinder< T >::second_pass

set_noiseMap()

template<typename T >

void aare::ClusterFinder< T >::set_noiseMap ( NDView< T, 2 >  noise_map )

inline

set_peripheralThresholdFactor()

template<typename T >

void aare::ClusterFinder< T >::set_peripheralThresholdFactor ( int  factor )

inline

single_pass()

template<typename T >

void aare::ClusterFinder< T >::single_pass

(

NDView< T, 2 >

img

)

steal_hits()

template<typename T >

std::vector< Hit > aare::ClusterFinder< T >::steal_hits ( )

inline

store_clusters()

template<typename T >

void aare::ClusterFinder< T >::store_clusters

total_clusters()

template<typename T >

size_t aare::ClusterFinder< T >::total_clusters ( ) const

inline

Field Documentation

binary_

template<typename T >

NDArray<bool, 2> aare::ClusterFinder< T >::binary_

private

child

template<typename T >

std::map<int, int> aare::ClusterFinder< T >::child

private

current_label

template<typename T >

int aare::ClusterFinder< T >::current_label

private

di

template<typename T >

const std::array<int, 4> aare::ClusterFinder< T >::di {{0, -1, -1, -1}}

private

di_

template<typename T >

const std::array<int, 8> aare::ClusterFinder< T >::di_ {{0, 0, -1, 1, -1, 1, -1, 1}}

private

dj

template<typename T >

const std::array<int, 4> aare::ClusterFinder< T >::dj {{-1, -1, 0, 1}}

private

dj_

template<typename T >

const std::array<int, 8> aare::ClusterFinder< T >::dj_ {{-1, 1, 0, 0, 1, -1, -1, 1}}

private

h_size

template<typename T >

std::unordered_map<int, Hit> aare::ClusterFinder< T >::h_size

private

hits

template<typename T >

std::vector<Hit> aare::ClusterFinder< T >::hits

private

labeled_

template<typename T >

NDArray<int, 2> aare::ClusterFinder< T >::labeled_

private

noiseMap

template<typename T >

NDView<T, 2> aare::ClusterFinder< T >::noiseMap

private

original_

template<typename T >

NDView<T, 2> aare::ClusterFinder< T >::original_

private

peripheral_labeled_

template<typename T >

NDArray<int, 2> aare::ClusterFinder< T >::peripheral_labeled_

private

peripheralThresholdFactor_

template<typename T >

int aare::ClusterFinder< T >::peripheralThresholdFactor_ = 5

private

shape_

template<typename T >

const std::array<ssize_t, 2> aare::ClusterFinder< T >::shape_

private

threshold_

template<typename T >

T aare::ClusterFinder< T >::threshold_

private

use_noise_map

template<typename T >

bool aare::ClusterFinder< T >::use_noise_map = false

private

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The documentation for this class was generated from the following file:

• core/include/aare/core/VariableSizeClusterFinder.hpp