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Author	SHA1	Message	Date
Dhanya Thattil	f3f3e2af6a	map of strings	2025-06-11 12:04:56 +02:00
Dhanya Thattil	031d9503d8	fixed size_t for consistencies, done everything except array of ns and map	2025-06-10 17:20:56 +02:00
Dhanya Thattil	cba2e46e2f	threshold energy	2025-06-10 11:02:13 +02:00
Dhanya Thattil	b4a9b4caec	minor refactoring	2025-06-10 10:49:53 +02:00
Dhanya Thattil	be7f510775	fix for burst mode when not in file	2025-06-10 10:42:43 +02:00
Dhanya Thattil	56fa6f6bfb	added counter mask, fixed adc mask data type, removed redundant scan parameter parsing	2025-06-10 09:25:20 +02:00
Dhanya Thattil	ca4d392b2f	dbit offset and transceiver mask	2025-06-09 16:03:55 +02:00
Dhanya Thattil	3b65e92cb7	added num interfaces and ten giga enable	2025-06-09 15:14:35 +02:00
Dhanya Thattil	755a8fb2b7	added exptime, period in hdf5, also added print for chrono and StringTo	2025-06-09 14:41:07 +02:00
Dhanya Thattil	dc7f6d44f2	fixed master h5	2025-06-09 00:41:21 +02:00
Dhanya Thattil	480e28c927	wip at fixing hdf5 master file	2025-06-06 16:36:40 +02:00
Dhanya Thattil	d7242671b2	Merge branch 'main' into dev/hdf5	2025-06-05 16:18:05 +02:00
Dhanya Thattil	a6a02249bc	refactoring, removing redundant functiosn to read header fields	2025-06-05 16:17:22 +02:00
froejdh_e	efd2338f54	deploy docs on release only	2025-06-05 14:55:00 +02:00
froejdh_e	b97f1e24f9	merged developer	2025-06-05 14:42:37 +02:00
Erik Fröjdh	1bc2fd770a	Binding 5x5, 7x7 and 9x9 clusters in python (#188) ... - New binding code with macros to bind all cluster templates - Simplified factory function on the python side - 5x5, 7x7 and 9x9 bindings in python	2025-06-05 08:57:59 +02:00
Dhanya Thattil	a3f831dc9e	efficiently read in one hyperslab read instead of multiple reads in a loop	2025-06-05 00:38:27 +02:00
Dhanya Thattil	76b8872fe6	refactored a bit	2025-06-05 00:11:24 +02:00
Dhanya Thattil	55236ce6cc	todo minor	2025-06-04 16:58:09 +02:00
Dhanya Thattil	e7d3e667b0	should work for other multiple frame reads	2025-06-04 16:54:18 +02:00
Dhanya Thattil	d9cbf0f481	able to get headers from multiple modules as well	2025-06-04 15:59:27 +02:00
Dhanya Thattil	5681e18403	merge from latest developer	2025-06-03 11:24:37 +02:00
Erik Fröjdh	69964e08d5	Refactor cluster bindings (#185) ... - Split up the file for cluster bindings - new file names according to bind_ClassName.hpp	2025-06-03 08:43:40 +02:00
Erik Fröjdh	94ac58b09e	For 2025.5.22 release (#181) ... Co-authored-by: Patrick <patrick.sieberer@psi.ch> Co-authored-by: JulianHeymes <julian.heymes@psi.ch> Co-authored-by: Dhanya Thattil <dhanya.thattil@psi.ch> Co-authored-by: Xiangyu Xie <45243914+xiangyuxie@users.noreply.github.com> Co-authored-by: xiangyu.xie <xiangyu.xie@psi.ch> Co-authored-by: AliceMazzoleni99 <alice.mazzoleni@psi.ch> Co-authored-by: Mazzoleni Alice Francesca <mazzol_a@pc17378.psi.ch> Co-authored-by: siebsi <sieb.patr@gmail.com> 2025.5.22	2025-05-22 11:40:39 +02:00
froejdh_e	9ecf4f4b44	merge	2025-05-22 11:23:57 +02:00
froejdh_e	f2a024644b	bumped version upload on release	2025-05-22 11:10:23 +02:00
Erik Fröjdh	9e1b8731b0	RawSubFile support multi file access (#173) ... This PR is a fix/improvement to a problem that Jonathan had. (#156) The original implementation opened all subfiles at once witch works for normal sized datasets but fails at a certain point (thousands of files). - This solution uses RawSubFile to manage the different file indicies and only opens the file we need - Added logger.h from slsDetectorPackage for debug printing (in production no messages should be visible)	2025-05-22 11:00:03 +02:00
Erik Fröjdh	a6eebbe9bd	removed extra const on return type, added cast (#177) ... Fixed warnings on apple clang: - removed extra const on return type - added cast to suppress a float to double conversion warning	2025-05-20 15:27:38 +02:00
Erik Fröjdh	81588fba3b	linking to threads and removed extra ; (#176) ... - Fixing broken build of tests on RH8 by linking pthreads - Removed extra ; causing warnings with -Wpedantic	2025-05-06 17:18:54 +02:00
AliceMazzoleni99	276283ff14	automated versioning (#175) ... Co-authored-by: mazzol_a <mazzol_a@pc17378.psi.ch> Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch>	2025-05-06 14:48:54 +02:00
Erik Fröjdh	cf158e2dcd	Added scurve fitting (#168) ... - added scurve fitting with two different signs (scurve, scurve2) - at the moment no option to set initial parameters --------- Co-authored-by: JulianHeymes <julian.heymes@psi.ch>	2025-05-05 11:40:04 +02:00
Erik Fröjdh	12ae1424fb	consistent use of ssize_t instead of int64_t (#167) ... - Consistent use of ssize_t to avoid issues on 32 bit platforms and also mac with (long long int as ssize_t)	2025-04-25 15:52:02 +02:00
AliceMazzoleni99	6db201f397	updated conda environment (#169) ... - updated dev-env.yml conda environment file - added boost-histogram as a requirement for the python tests - added environment file in conda build process	2025-04-25 15:24:45 +02:00
AliceMazzoleni99	d5226909fe	Api cluster vector (#147) ... Cluster is newly templated on ClusterSize, Cluster data type and cluster coordinate type, accepting arbitrary cluster sizes.	2025-04-25 12:29:39 +02:00
mazzol_a	eb6862ff99	changed name of GainMap to InvertedGainMap	2025-04-25 12:03:59 +02:00
mazzol_a	f06e722dce	changes from PR review	2025-04-25 11:38:56 +02:00
Erik Fröjdh	2e0424254c	removed uneccecary codna numpy variants (#165) ... With numpy 2.0 we no longer need to build against every supported numpy version. This way we can save up to 6 builds. - https://numpy.org/doc/stable/dev/depending_on_numpy.html - https://conda-forge.org/docs/maintainer/knowledge_base/#building-against-numpy	2025-04-25 10:31:40 +02:00
Erik Fröjdh	7b5e32a824	Api extra (#166) ... Changes to be able to run the example notebooks: - Invert gain map on setting (multiplication is faster but user supplies ADU/energy) - Cast after applying gain map not to loose precision (Important for int32 clusters) - "factor" for ClusterFileSink - Cluster size available to be able to create the right file sink	2025-04-25 10:31:16 +02:00
froejdh_e	86d343f5f5	merged with developer	2025-04-23 11:45:04 +02:00
Erik Fröjdh	fd0196f2fd	Developer (#164) ... - State before merging the new cluster vector API --------- Co-authored-by: Patrick <patrick.sieberer@psi.ch> Co-authored-by: JulianHeymes <julian.heymes@psi.ch> Co-authored-by: Dhanya Thattil <dhanya.thattil@psi.ch> Co-authored-by: Xiangyu Xie <45243914+xiangyuxie@users.noreply.github.com> Co-authored-by: xiangyu.xie <xiangyu.xie@psi.ch> Co-authored-by: siebsi <sieb.patr@gmail.com> 2025.4.22	2025-04-22 16:41:48 +02:00
froejdh_e	129e7e9f9d	Merge branch 'developer' of github.com:slsdetectorgroup/aare into developer	2025-04-22 16:24:32 +02:00
froejdh_e	58c934d9cf	added mpl to conda specs	2025-04-22 16:24:15 +02:00
Erik Fröjdh	4088b0889d	Merge branch 'main' into developer	2025-04-22 16:18:48 +02:00
mazzol_a	d5f8daf194	removed debug option in CMakelist	2025-04-22 16:16:31 +02:00
froejdh_e	c6e8e5f6a1	inverted gain map	2025-04-22 16:16:27 +02:00
froejdh_e	b501c31e38	added missed commit	2025-04-22 15:22:47 +02:00
Erik Fröjdh	326941e2b4	Custom base for decoding ADC data (#163) ... New function apply_custom_weights (can we find a better name) that takes a uint16 and a NDView<double,1> of bases for the conversion. For each supplied weight it is used as base (instead of 2) to convert from bits to a double. --------- Co-authored-by: siebsi <sieb.patr@gmail.com>	2025-04-22 15:20:46 +02:00
Erik Fröjdh	84aafa75f6	Building wheels and uploading to pypi (#160) ... Still to be resolved in another PR: - Consistent versioning across compiled code, conda and pypi	2025-04-22 08:36:34 +02:00
mazzol_a	177459c98a	added multithreaded cluster finder test	2025-04-17 17:09:53 +02:00
Mazzoleni Alice Francesca	c49a2fdf8e	removed cluster_2x2 and cluster3x3 specializations	2025-04-16 16:40:42 +02:00