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Author	SHA1	Message	Date
Erik Fröjdh	a0fb4900f0	Update RELEASE.md	2025-08-18 12:16:44 +02:00
Erik Fröjdh	91d74110fa	specified glibc in conda build (#222) ... Fixed a runtime error on older linux systems, since by mistake we used glibc from ubutu 24. Same code as in slsDetectorPackage now.	2025-08-18 12:14:54 +02:00
mazzol_a	f54e76e6bf	view is only allowed on l-value frame (#220) ... Vadym accidentally called view() directly on an R-value frame, which leads to a dangling view pointer. Adjusted code such that compiler throws an error if called on an R-value frame. Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch>	2025-08-18 11:02:05 +02:00
JFMulvey	c6da36d10b	Fixed the order of cluster.data being incorrect (#221) ... While using the cluster finder and saving a cluster, pixels which are out of bounds are skipped. cluster.data should contain the pedestal corrected ADU information of each pixel. However, the counter "i" which keeps track of the position of cluster.data is only incremented if the pixel was inside the bounds of the frame. This means that any clusters close to the frame's edges are not construed properly. This means that if you want to extract a 3x3 from a 9x9 cluster, it can fail if the cluster data is not properly centered in the pixel. Fixed by moving i++ outside the bounds check. Co-authored-by: Jonathan Mulvey <jonathan.mulvey@psi.ch>	2025-08-14 09:27:02 +02:00
mazzol_a	5107513ff5	Pedestal, calibration in g0 and counting pixels (#217) ... - NDView operator()(size_t) now returns a view with one less dimension - Apply calibration takes also a 2D array and then ignores pixels that switch - Calculate pedestal from a dataset which contains all three gains - G0 variant of pedestal - Function to count pixels switching	2025-07-25 13:50:53 +02:00
mazzol_a	f7aa66a2c9	templated calculate_pedestal with boolean template argument only_gain… (#218) ... some refactoring for less code duplication, added functionality drop_dimension in NDArray	2025-07-25 12:25:41 +02:00
mazzol_a	3ac94641e3	Move constructor to drop 1st dimension of NDArray (#219) ... - helper function to initialize shape - helper function to calculate the number of elements - move constructor to create a NDArray<T, Ndim-1> if sizes match	2025-07-25 12:03:42 +02:00
froejdh_e	89bb8776ea	check Ndim on drop_first_dim	2025-07-25 11:44:27 +02:00
Erik Fröjdh	1527a45cf3	Merge branch 'template_on_gain0' into dev/move_dim	2025-07-25 10:45:20 +02:00
froejdh_e	3d6858ad33	removed data_ref	2025-07-25 10:42:47 +02:00
froejdh_e	d6222027d0	move constructor for Ndim-1	2025-07-25 10:40:32 +02:00
mazzol_a	1195a5e100	added drop dimension test, added file calibration.test.cpp	2025-07-25 10:18:55 +02:00
mazzol_a	1347158235	templated calculate_pedestal with boolean template argument only_gain0, added drop_dimension to NDArray and reference pointer to data	2025-07-24 15:40:05 +02:00
froejdh_e	8c4d8b687e	using make_subview	2025-07-24 12:16:08 +02:00
froejdh_e	b8e91d0282	zero out switching pixels if 2D calibration is used	2025-07-24 12:10:13 +02:00
froejdh_e	46876bfa73	reduced duplicate code	2025-07-24 10:57:02 +02:00
froejdh_e	348fd0f937	removed unused code	2025-07-24 10:14:29 +02:00
froejdh_e	0fea0f5b0e	added safe_divide to NDArray and used it for pedestal	2025-07-24 09:40:38 +02:00
Erik Fröjdh	cb439efb48	added tests	2025-07-23 11:34:47 +02:00
Erik Fröjdh	5de402f91b	added docs	2025-07-23 11:05:44 +02:00
froejdh_e	9a7713e98a	added g0 calibration, pedestal and pixel counting	2025-07-22 16:42:09 +02:00
froejdh_e	b898e1c8d0	date also in release 2025.7.18	2025-07-18 10:23:17 +02:00
froejdh_e	4073c0cbe0	bumped version	2025-07-18 10:21:28 +02:00
Erik Fröjdh	9a3694b980	Merge branch 'main' into dev/reduce	2025-07-18 10:19:42 +02:00
Erik Fröjdh	abae2674a9	Apply calibration to Jungfrau raw data (#216) ... - Added function to read calibration file - Multi threaded pedestal subtraction and application of the calibration	2025-07-18 10:19:14 +02:00
maliakal_d	1414d75320	fix/mh02 map (#214) ... - Fixed bug in reading MH02 files	2025-07-17 15:32:40 +02:00
Erik Fröjdh	85c3bf7bed	Merge branch 'main' into dev/reduce	2025-07-16 17:04:23 +02:00
Erik Fröjdh	fa3b7a5afe	Merge branch 'main' into fix/mh02-map	2025-07-16 17:03:31 +02:00
Erik Fröjdh	e95326faa1	Fix/remove cpp (#213) ... - Removed unused ClusterFile.cpp (code from before it was templated) - Updated the list of .cpp files in CMakeLists.txt to match alphabetic listing in the browser	2025-07-16 16:43:08 +02:00
froejdh_e	8143524acf	updated release notes	2025-07-16 16:41:27 +02:00
froejdh_e	8e2346abf8	fixed pixel map for mh02	2025-07-16 15:54:29 +02:00
Erik Fröjdh	8eb7fec435	Merge branch 'main' into dev/reduce	2025-07-16 11:13:11 +02:00
Erik Fröjdh	d8952eccc6	Update RELEASE.md	2025-06-27 17:19:14 +02:00
Erik Fröjdh	83717571c8	Merge branch 'main' into dev/reduce	2025-06-27 17:10:24 +02:00
Erik Fröjdh	97dae4ac60	added empty() to ClusterVector and fixed docs (#209) ... - added ClusterVector::empty() to check if the vector is empty - Fixed generation of missing docs for ClusterVector	2025-06-27 17:00:46 +02:00
froejdh_e	5a9c3b717e	naive implementation of 3x3 and 5x5 reduction	2025-06-27 16:36:21 +02:00
Erik Fröjdh	e3f4b34b72	Const element access and fixed comparing bug (#208) ... - Added const element access - Added const data* - Fixed bug comparing two Views of same size but different shapes closes #207	2025-06-27 14:13:51 +02:00
Erik Fröjdh	6ec8fbee72	migrated tags for tests and added missing raw files (#206) ... - No changes or evaluation of existing tests - Tags for including tests that require data is changed to **[.with-data]** and **--with-data** for C++ and python respectively - Minor update to docs - Added missing files to the test data repo	2025-06-26 17:11:20 +02:00
mazzol_a	30822d9c5f	Dev/fix/rawfilereader with roi (#192) ... geometry is calculated from master file.	2025-06-24 16:41:28 +02:00
mazzol_a	ff7312f45d	replaced fmt with LOG	2025-06-24 16:24:25 +02:00
mazzol_a	8e7c9eadff	fixed cmake merge	2025-06-24 13:49:05 +02:00
mazzol_a	d35b7762b4	Merge branch 'main' into dev/fix/rawfilereader_with_roi	2025-06-24 13:43:26 +02:00
mazzol_a	df4dbb8fd0	fixed numpy test	2025-06-24 13:39:32 +02:00
mazzol_a	c92be4bca2	added eiger quad test	2025-06-24 11:29:25 +02:00
mazzol_a	664055de92	fixed quad structure	2025-06-23 17:27:13 +02:00
mazzol_a	318e640639	only test over the public interface	2025-06-23 17:27:13 +02:00
mazzol_a	c6990dabad	deleted unused variables	2025-06-23 17:27:13 +02:00
mazzol_a	c9fe16b4c2	use target_compile_definitions (#203) ... use target_compile_definition instead of add_compile_definition to use macros across projects	2025-06-23 09:06:25 +02:00
Erik Fröjdh	64438c8803	Merge branch 'main' into dev/fix/rawfilereader_with_roi	2025-06-23 08:21:39 +02:00
mazzol_a	9f8eee5d08	fixed python bindings - only read headers of modules that are in the roi	2025-06-16 11:07:00 +02:00