502 Commits

This Branch

This Branch

All Branches

Author	SHA1	Message	Date
Erik Frojdh	483df50e98	added more eiger tests	2026-09-02 11:33:37 +02:00
mazzol_a	c488c0063d	use enum for udpporttype	2026-09-01 17:11:02 +02:00
mazzol_a	33ee8f9143	cleaned up deprecated test tags	2026-09-01 17:11:02 +02:00
mazzol_a	2a77674adf	moved DetectorGeometry, vector of ROIGeometry to master file	2026-09-01 17:11:02 +02:00
Erik Fröjdh	4ba2185bf6	Merge branch 'main' into dev/filereading_for_disabled_udp	2026-08-28 10:46:41 +02:00
Erik Fröjdh	568f94926b	baseline AGENTS.md (#356) ... - AI generated baseline for AGENTS.md - Meant to be edited in the future	2026-08-28 09:22:29 +02:00
Erik Fröjdh	85f9d0176a	Dev/guess clusters (#355) ... - exposing ClusterVector::empty in python - added member guess_n_clusters	2026-08-25 09:15:38 +02:00
Erik Fröjdh	26d11f74a8	Fix/expand const buffer (#354) ... Minor API change: - NDView<T> implicitly converts to NDView<const T> (as std::span in C++20) - expand4to8bit and expand24to32bit now takes a view over const uint8_t to show that the input is not changes closes #291	2026-08-25 08:51:41 +02:00
mazzol_a	cf07d40bb4	updated rois in master file	2026-08-24 16:07:40 +02:00
mazzol_a	e4f9b791f9	updated release notes	2026-08-24 14:29:12 +02:00
mazzol_a	bdb2a762d3	moved ROI definition into seperate file	2026-08-24 14:28:31 +02:00
mazzol_a	92ad10f2b6	added python tests	2026-08-24 14:28:31 +02:00
mazzol_a	94d2151eb7	updated num_rois() member to take into account udp ROIs	2026-08-24 14:28:31 +02:00
mazzol_a	c8d6a19bfa	give ROI higher precedence	2026-08-24 14:28:31 +02:00
mazzol_a	a385d6cd42	BugFix:iterate_over_enabled_ports	2026-08-24 14:28:31 +02:00
mazzol_a	973fb5a9ce	replaced geometry calculations with members in DetectorGeometry	2026-08-24 14:28:31 +02:00
mazzol_a	998044454d	extract total frames in file from subfiles	2026-08-24 14:28:31 +02:00
mazzol_a	7845fe6844	added additional test	2026-08-24 14:28:31 +02:00
mazzol_a	59d96550f1	added support for eiger quad	2026-08-24 14:28:31 +02:00
mazzol_a	21d7778ded	adjusted for horizontally stacked modules	2026-08-24 14:28:31 +02:00
mazzol_a	6029b945da	reverted partition algorithm not needed	2026-08-24 14:28:31 +02:00
mazzol_a	c82039f586	updated release notes	2026-08-24 14:28:29 +02:00
mazzol_a	daa118471a	removed unused variables	2026-08-24 14:27:49 +02:00
mazzol_a	ec77acb890	creates ROIs for disabled udp and merge afterwards	2026-08-24 14:27:49 +02:00
mazzol_a	2eb2b8e0e8	added functionality to merge rois	2026-08-24 14:27:49 +02:00
mazzol_a	f6ae67d097	implemented partition function	2026-08-24 14:27:49 +02:00
mazzol_a	c597a334a8	updated aare file reader for disabled udp ports	2026-08-24 14:27:49 +02:00
mazzol_a	4970a92d50	updated clang-format commands (#352) ... - updated custom targets clang-format, check-format, clang-tidy - find: paths must precede expression: `\' (double \\ not properly escaped in bash)	2026-08-20 16:14:32 +02:00
Erik Fröjdh	fef57c13c9	added const overload for NDArray::view() (#351) ... - Added missing const T overload for NDArray::view() - Tests	2026-08-19 16:21:37 +02:00
Erik Fröjdh	af25aea684	Fixed bug in reading analog samples for <v8.0 (#349) ... Before v8.0 we should always try to read analog samples. This bug resulted in old Mönch03 data not being reordered. 1. Added test for master file parsing 2. Fixed code closing #348	2026-08-19 12:34:37 +02:00
Erik Fröjdh	aa39470686	Removed unused DynamicCluster (#346) ... - Removed unused DynamicCluster - Removed commented out references to ClusterFileV2	2026-08-14 11:11:43 +02:00
Erik Fröjdh	4f6b69fba6	Removing deprecated use of lmfit (#344) ... Removed the lmfit based fitting and the old API for calling functions closes #296	2026-08-14 10:31:07 +02:00
Erik Fröjdh	e26db97b5c	Prototype multi threaded file reader (#343) ... - Reading files from nfs shares tops out at ~1GB/s for single threaded reads. - MultiThreadedFileReader uses our File wrapper to read a generic file in parallel - Placed in aare::experimental to show that it's not production ready	2026-08-11 15:28:54 +02:00
mazzol_a	533ecb8a4a	removed patch for minuit2 CMakeLists.txt (#336) ... - patch no longer needed for minuit2 as CMakeLists.txt has been updated: https://github.com/GooFit/Minuit2/commit/46716e516e34a95e1f4effa95705a9e0c3425839	2026-07-16 10:39:06 +02:00
Erik Fröjdh	db67e870d9	readme 2026.7.2	2026-07-02 17:00:45 +02:00
Erik Fröjdh	7804e3a35b	bumped version	2026-07-02 16:51:44 +02:00
3 people	4aadb6f7f0	refactor: hide Minuit2 from aare's public API (#331) ... - Move Chi2.hpp from include/aare/ to src/ (private) - Pimpl on FitModel<Model>: MnUserParameters/MnStrategy behind opaque src/FitModelImpl.hpp, no Minuit2 includes in public headers - Move fit_pixel/fit_3d bodies to Fit.cpp with explicit instantiations for all 8 models; drop FCN template param from public API - CMake: aare::Minuit2 wrapped in $<BUILD_INTERFACE:...> (hidden from exported targets, same pattern as lmfit), MINUIT2_INSTALL OFF, Chi2.hpp removed from PUBLICHEADERS - Update python bindings and benchmark callsites accordingly --------- Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch> Co-authored-by: Alice <alice.mazzoleni@psi.ch>	2026-07-02 16:04:22 +02:00
mazzol_a	b4686e6b85	added moench05 defs (#333) ... - add moench05 chip/chiptestboard defs	2026-06-26 17:43:06 +02:00
maliakal_d	8c9f4ca763	cmake: treat warnings as errors (#330) ... - treating warnings as errors during github and gitea workflows	2026-06-16 12:32:28 +02:00
mazzol_a	982419149d	Merge branch 'main' into dev/treat_errors_as_warnings	2026-06-15 14:44:13 +02:00
mazzol_a	0a4c4f5ec1	change AxisType to float for pixelhistogram tests	2026-06-15 14:27:26 +02:00
mazzol_a	559c822a02	change AxisType to float for pixelhistogram tests	2026-06-15 14:22:24 +02:00
mazzol_a	b71fcb1d1a	fixed apple clang warning	2026-06-15 14:03:36 +02:00
mazzol_a	85833cebb3	fixed unsued warning in PedestalTrackingHistogram	2026-06-15 11:52:44 +02:00
Erik Fröjdh	b4b28fc9e0	len() and pedestal subtraction (#328) ... Collection of small improvements in usability: - NDView works for large arrays - Direct subtraction of Pedestal from np.array - len() support for python bindings of files	2026-06-15 11:38:06 +02:00
mazzol_a	ae8744358a	cmake format	2026-06-15 11:36:03 +02:00
mazzol_aandErik Fröjdh	ee7503082d	Dev/matterhorn decoder (#324) ... - reshape image directly in decoder such that first dimension is num counters - take into account chip artefact in decoder. --------- Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch>	2026-06-11 15:04:20 +02:00
Erik Fröjdh	2041c7310a	Fixed usage of fmt::format and fmt::print for C++20 (#323) ... With C++20 `fmt::print(s)` expects a compile time format string and otherwise fails complaining about consteval. To get runtime formatting use `fmt::print(fmt::runtime(s))`	2026-06-11 08:01:03 +02:00
Erik Fröjdh	17d04083a7	Bugfix: NDArary/NDView overflow in calculating number of elements (#322) ... Fixed number of elements calculation that caused integer overflow. Now return size_t instead of int.	2026-06-10 12:24:18 +02:00
Erik Fröjdh	b78ea64ea7	Conditional use of Minuit2 (#320) ... If AARE_FETCH_MINUIT is set to OFF we first look for a standalone Minuit2 and if that is not found we try to find Minuit2 as a part of ROOT. In both cases we make an alias to allow for simpler use of the target later. It still doesn't solve the issue that we install Minuit to when we fetch it but that can be addressed in a separate PR. closes #316	2026-06-10 08:30:03 +02:00