2818a808d3
Rename workflow file for clarity
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2026-03-24 09:54:29 +01:00
4c7bfcde93
Rename workflow file for conda package deployment
2026-03-24 09:53:50 +01:00
f45617e9a1
also deploy for macos
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2026-03-18 14:59:06 +01:00
4083943004
macos build in github ci
2026-03-18 14:58:04 +01:00
bab597c302
osx cibuildwheel, numpy =>2.1 pytest-checlk
2026-03-18 14:44:15 +01:00
81acab6091
bumped version number edited RELEASE.md ( #288 )
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Co-authored-by: Alice <alice.mazzoleni@psi.ch >
2026-03-17 17:22:36 +01:00
mazzol_a
d9ff73e8b2
added matterhorn transformation tests ( #284 )
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- added matterhorn transformation tests
---------
Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch >
2026-03-17 16:54:06 +01:00
fca17e65d2
Added conda/pypi buyilds for python 3.14 removed 3.11 ( #287 )
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In line with supporting the 3 latest versions of Python
2026-03-17 10:49:52 +01:00
mazzol_a
eee34ba211
fixed matterhorn pixelmap ( #283 )
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Fixed Matterhorn PixelMap
Example Image can be found on
pc-moench-03/tmp/alicetestdata3_master_3.json
2026-03-09 14:38:26 +01:00
hinger_v
c665c0e6c6
Fix #281 std::bad_optional_access in RawMasterFile::roi() ( #282 )
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Fixes #281
2026-02-27 12:17:17 +01:00
mazzol_a
bfbb4eab05
Dev/remove rh9 local workflow ( #280 )
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2026-02-26 16:56:58 +01:00
mazzol_a
3ef54cb4b2
fixed workflow ( #277 )
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2026-02-26 14:47:10 +01:00
mazzol_a
2a3c121574
Fix/test ( #278 )
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Run tests using data on local RHEL8 / build (push) Has been cancelled
Build on local RHEL8 / build (push) Has been cancelled
2026-02-26 14:23:45 +01:00
mazzol_a
31dd0ca8b7
Dev/automatic nfs server upload ( #276 )
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- automatically builds aare and uploads to mpc2935 (from there its
eventually uploaded to nfs every day)
2026-02-25 16:40:03 +01:00
mazzol_a
2139e5843c
Dev/stuff from pyctbgui ( #273 )
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Matterhorn10 Transform
some other Transformations from pyctbGUI
added method get_reading_mode for easier error handling in decoders
## TODO:
- proper error handling for all other decoders
- proper documentation for all other decoders
- refactoring all other decoders to store hard coded values in a Struct
ChipSpecification
2026-02-19 16:12:44 +01:00
mazzol_a
5dbc746462
clang-format
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2026-02-19 15:35:19 +01:00
mazzol_a
1f7a87cc30
updated Documentation and README ( #274 )
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2026-02-19 11:22:35 +01:00
mazzol_a
218f31ce60
Dev/multiple rois in aare ( #263 )
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Reading multiple ROI's for aare
- read_frame, read_n etc throws for multiple ROIs
- new functions read_ROIs, read_n_ROIs
- read_roi_into (used for python bindings - to not copy)
all these functions use get_frame or get_frame_into where one passes the
roi_index
## Refactoring:
- each roi keeps track of its subfiles that one has to open e.g.
subfiles can be opened several times
- refactored class DetectorGeometry - keep track of the updated module
geometries in new class ROIGeometry.
- ModuleGeometry updates based on ROI
## ROIGeometry:
- stores number of modules overlapping with ROI and its indices
- size of ROI
Note: only tested size of the resulting frames not the actual values
---------
Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch >
Co-authored-by: Erik Fröjdh <erik.frojdh@gmail.com >
2026-02-18 10:57:56 +01:00
mazzol_a
7f64b9a616
Read Xilinx CTB files ( #271 )
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File content is the same as the normal ctb files so no changes needed
for reading.
- Accept DetectorType::Xilinx_ChipTestBoard in the CtbRawFile class
- Check if file is open in constructor
2026-01-27 09:49:17 +01:00
0bc0165c11
Merge branch 'main' into fix/xctb
2026-01-27 09:06:21 +01:00
mazzol_a
f6e48182d1
Fix offset in ClusterFinding ( #269 )
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Directly casting the values in the cluster finder would truncate the
resulting ADU value and create an offset when summing the cluster.
1. do pedestal subtraction and then round
2. static cast to result type only after rounding
3. if constexpr to avoid unnecessary rounding
2026-01-26 14:10:25 +01:00
8ac633dc75
open xilinx ctb
2026-01-26 10:44:09 +01:00
9d6798b9c5
removed comment
2026-01-21 09:36:17 +01:00
0ce6128b4f
added rounding in cluster finder
2026-01-21 09:35:06 +01:00
mazzol_a
b77a576f72
Dev/automate tests using data ( #267 )
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- automatically run python tests
- automatically run test using data files on local runner from gitea
- fixed some of the workflows
---------
Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch >
2026-01-20 17:20:48 +01:00
mazzol_a
cbefbc43e9
Fix/mt cluster finder dropping frames ( #265 )
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Issue from Jonathan.
- writing to output queue did not check if queue is full - such that
frames were dropped.
## Dataset to recreata issue:
data overf 10G interface can be accessed on pc: pc-highz-02
raw frames:
/mnt/sls_det_storage_10G/highZ_data/JMulvey/Calibration_From_HZ02/2025Jan_m343/Zr15800eV/250129_CZTsolo_Xray_Tp_15C_tint_100_master_0.json
pedestal frames:
/mnt/sls_det_storage_10G/highZ_data/JMulvey/Calibration_From_HZ02/2025Jan_m343/Zr15800eV/250129_CZTsolo_Pedestal_Tp_15C_tint_100_master_0.json
---------
Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch >
2026-01-20 17:02:27 +01:00
31f3a60cd3
added correct decoder for ADC-SAR-05-06-07-08 ASIC ( #266 )
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Adding function to correctly decode the ADC-SAR-05-06-07-08 Chip.
Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch >
2026-01-20 16:38:06 +01:00
mazzol_a
f79ee55430
fixed parsing of dynamic range ( #268 )
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1. fixed parsing of dynamic range (bug which I added during refactoring)
2. added tests for bitdepth!
3. updated path for test file
2026-01-19 16:54:19 +01:00
dceda21496
fixed parsing of dynamic range
2026-01-19 15:20:37 +01:00
c0357e2020
Improvements to NDArray ( #258 )
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- Removed redundant arr.value(ix,iy...) on NDArray use arr(ix,iy...)
- Removed Print/Print_some/Print_all form NDArray (operator << still
works)
- Added const* version of .data()
- Comment for documentation
- Some extra tests
2025-12-19 14:49:41 +01:00
mazzol_a
dfb29b719f
fixed out of bounds in test ( #259 )
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- fixed test (out of bounds access)
2025-12-19 13:15:49 +01:00
7f3123d68f
Added parsing of exptime and period from master files ( #256 )
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- New aare:to_string/string_to similar to what we have in
slsDetectorPackage
- Added members period and exptime to RawMasterFile
- Parsing exposure time and period for json and raw master file formats
- Parsing of RawMasterFile from string stream to enable test without
files
Comments:
- to_string is at the moment not a public header. Can make it later if
needed. This gives us full freedom with the API
- FileConfig should probably be deprecated need to look into it.
Meanwhile removed python bindings and string conv
2025-12-18 17:04:12 +01:00
mazzol_a
fb95e518b4
Dev/interpolation documentation ( #255 )
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- added transform_eta_values for easier debugging more control for the
user
- updated Documentation
2025-12-16 13:06:28 +01:00
80a2b02345
Dev/decode my302 ( #254 )
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This PR adds support for decoding digital data from the my320 test chip.
- Added BitOffset (strong type)
- Expand 24 to 32 bit
- Python bindings for decoding my302
- Improved docs
2025-12-09 18:27:02 +01:00
mazzol_a
e795310b16
fixed tests ( #252 )
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- fixed failed tests
- removed import of pickle, scipy
- still requires boost_histogram, pytest_check
Co-authored-by: Erik Fröjdh <erik.frojdh@psi.ch >
2025-11-28 11:28:13 +01:00
mazzol_a
1d8b68bf75
Run catch2 tests in CI ( #253 )
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- Build and run tests in CI
- Added macOS builds (and tests)
- Renamed workflow to build_with_docs.yml
2025-11-27 08:58:24 +01:00
cf53922bd3
restrict upload artifact
2025-11-26 20:21:57 +01:00
13cffb1ea8
WIP
2025-11-26 20:11:38 +01:00
bea373a112
with file
2025-11-26 20:09:05 +01:00
a66ce15a6c
renamed workflow and added macos-latest
2025-11-26 20:07:32 +01:00
44fd015cfe
added catch2 to dev env
2025-11-26 20:00:03 +01:00
6fe822d5dd
WIP
2025-11-26 19:56:53 +01:00
8ed874a679
using tests
2025-11-26 19:54:43 +01:00
mazzol_a
dd5ed138cf
Dev/print filepath in error ( #251 )
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2025-11-25 11:25:44 +01:00
mazzol_a
8201c5e999
Fix/mythenfilereading ( #250 )
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Add counter mask as member of RawFile
BugFix: temporarily handle -1 for ROI in mythenfile
2025-11-24 12:29:08 +01:00
mazzol_a
03af5927ad
Release 2025.11.21 ( #249 )
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- Updated VERSION and script
- Updated release notes
2025-11-21 16:34:57 +01:00
452cfcb60f
updated release notes
2025-11-21 16:17:04 +01:00
e8402d9d36
updated version and version script
2025-11-21 16:14:05 +01:00
mazzol_a
a9de336817
added license ( #247 )
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- Added LICENSE file
- Added SPX identifier to source files
2025-11-21 15:11:30 +01:00
mazzol_a
6f7cb4ae30
Merge branch 'main' into dev/license
2025-11-21 14:52:54 +01:00
Erik Fröjdh
mazzol_a
hinger_v