113 lines
3.3 KiB
Bash
113 lines
3.3 KiB
Bash
#!/bin/bash
|
|
|
|
if [[ "$0" == *"filename_creator.sh"* ]]; then
|
|
echo "script changes env. variables: should be invoked with source, not sh "
|
|
exit
|
|
|
|
fi
|
|
|
|
|
|
echo $0
|
|
echo "printing filenames for module " $1
|
|
|
|
datafolder="/mnt/sls_det_storage/jungfrau_calib/data/Module_"$1"_Calib/"
|
|
datestring=$(date +%F)
|
|
echo "mkdir "$datafolder "if not already existing."
|
|
mkdir -p $datafolder
|
|
|
|
|
|
export TKBPG0="ju_udp_receiver_3threads_2_0 S "$datafolder"BP_M"$1"_"$datestring"_ 10.1.4.105"
|
|
|
|
export TKBPHG0="ju_udp_receiver_3threads_2_0 S "$datafolder"BP_M"$1"_"$datestring"_HGOG1G2_ 10.1.4.105"
|
|
|
|
export TKCSHG0="ju_udp_receiver_3threads_2_0 S "$datafolder"CS_M"$1"_"$datestring"_HGOG1G2_ 10.1.4.105"
|
|
|
|
export TKCSG0="ju_udp_receiver_3threads_2_0 S "$datafolder"CS_M"$1"_"$datestring"_ 10.1.4.105"
|
|
|
|
|
|
|
|
|
|
echo "exporting the fluorescence receiver commands "
|
|
export TKFG0="ju_udp_receiver_3threads_2_0 S "$datafolder"CuFluoG0_M"$1"_"$datestring"_ 10.1.4.105"
|
|
export TKFHG0="ju_udp_receiver_3threads_2_0 S "$datafolder"CuFluoHG0_M"$1"_"$datestring"_ 10.1.4.105"
|
|
export TKPG0="ju_udp_receiver_3threads_2_0 S "$datafolder"pedeG0_M"$1"_"$datestring"_ 10.1.4.105"
|
|
export TKPHG0="ju_udp_receiver_3threads_2_0 S "$datafolder"pedeHG0_M"$1"_"$datestring"_ 10.1.4.105"
|
|
|
|
|
|
|
|
|
|
|
|
echo "printing the analysis commands "
|
|
for file in $(find $datafolder -type f -exec basename {} \; | grep 000000 ); do
|
|
prefix=${file%_000000.dat}
|
|
echo $prefix ;
|
|
if [[ $prefix == *"BP"* ]]; then
|
|
|
|
bpfile=$prefix
|
|
|
|
fi
|
|
if [[ $prefix == *"CS"* ]]; then
|
|
|
|
csfile=$prefix
|
|
|
|
fi
|
|
if [[ $prefix == *"oG0"* ]]; then
|
|
|
|
cgofile=$prefix
|
|
|
|
fi
|
|
if [[ $prefix == *"eG0"* ]]; then
|
|
|
|
pgofile=$prefix
|
|
|
|
fi
|
|
if [[ $prefix == *"oHG0"* ]]; then
|
|
|
|
chgofile=$prefix
|
|
|
|
fi
|
|
if [[ $prefix == *"eHG0"* ]]; then
|
|
|
|
phgofile=$prefix
|
|
|
|
fi
|
|
|
|
# echo "ss"
|
|
done
|
|
echo "----------------------------------------------------------------------"
|
|
echo "---------------------START OF ANALYSIS CLI commands --------------------"
|
|
echo "----------------------------------------------------------------------"
|
|
echo "M"$1
|
|
echo "./BP_analysis "$1" "$datafolder$bpfile
|
|
echo "./CS_analysis "$1" "$datafolder $csfile
|
|
echo "./CuFluo_analysis "$1" G0 "$datafolder $pgofile $cgofile
|
|
echo "./CuFluo_analysis "$1" HG0 "$datafolder $phgofile $chgofile
|
|
echo "./JFMC_CalibWriter_wBP" "$1"
|
|
echo " "
|
|
echo "----------------------------------------------------------------------"
|
|
echo "---------------------END OF ANALYSIS CLI commands --------------------"
|
|
echo "----------------------------------------------------------------------"
|
|
|
|
|
|
echo "creating the output folders? Y for yes "
|
|
read -n 1 -s input
|
|
if [[ $input = "Y" ]]; then
|
|
echo "creating the output folders."
|
|
plotbasefolder="/afs/psi.ch/project/mythen/sophie/JFCalibration/plots/M"$1
|
|
mkdir -v $plotbasefolder
|
|
mkdir -v $plotbasefolder"/BackplanePulsing"
|
|
# mkdir -v $plotbasefolder"/Calib_"$datestring #done by/JFMC_CalibWrite
|
|
mkdir -v $plotbasefolder"/CuFluo"
|
|
mkdir -v $plotbasefolder"/CuFluo/G0"
|
|
mkdir -v $plotbasefolder"/CuFluo/HG0"
|
|
mkdir -v $plotbasefolder"/CurrentSource"
|
|
outdatabasefolder="/afs/psi.ch/project/mythen/sophie/JFCalibration/data/M"$1
|
|
mkdir -v $outdatabasefolder
|
|
echo "Output folders created"
|
|
|
|
else
|
|
echo "Exiting script"
|
|
|
|
fi
|
|
|